Protein ID | Pro_DTO070G2_2|g472.t1 |
Gene name | |
Location | scaffold_01:1239448..1242388 |
Strand | + |
Gene length (bp) | 2940 |
Transcript length (bp) | 1473 |
Coding sequence length (bp) | 1473 |
Protein length (aa) | 491 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08883 | DOPA_dioxygen | Dopa 4,5-dioxygenase family | 8.2E-24 | 60 | 128 |
PF06101 | Vps62 | Vacuolar protein sorting-associated protein 62 | 5.1E-10 | 313 | 438 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g472.t1 MTDAFAFSYPSPLAGYENLEPLSDERAEDGKSMKNPQHGILSKAYSEFPDPLSKGREGGFDVHIYHFQNSPDQAA FAKALWERIRREFPELRIYRFFDRPIGPHPVAMFEVNLFTPAQFGAFVPWLYILESHAHDEVMPINIWVKHRLLE DKPHKMRLFISLAVVGLSSTKPAWASLGDRATDVPPYVLEYAPLIWLHSQETYMPSDIQQQLDHTRPNVNWRAIE GVESPLTLNNLDTLNSMGNTSVYLTSLEGIEANPEPAWFRGIRPDAQGRTVDGTSSVLIIADRGNGTVDAFYFYF YAFNKGGKVLGLEFGDHIGDWEHNMIRFVNGTPDAIWYSQHASGQAFSYAAVEKKDKRPYVYSAVGTHANYAIPG KHDHTFPGFNLPAGFLLDYTDRGVLWDPMLNVYTYTYDGTTAAFQAVDSKDPVAWLEFNGRWGDDQPPNEPTLFG EAKNVAGPNGPRFKSLDRQLVCPSKPCFVLPFRTFSVDAA* |
Coding | >Pro_DTO070G2_2|g472.t1 ATGACAGACGCATTCGCTTTCTCATACCCATCTCCATTGGCGGGGTACGAAAACCTCGAGCCGCTATCCGACGAG CGCGCCGAAGACGGCAAGTCAATGAAAAATCCCCAACATGGCATATTAAGCAAAGCCTACTCGGAATTCCCCGAC CCTCTCTCCAAAGGCCGGGAAGGTGGCTTCGACGTCCACATCTATCATTTCCAAAACAGCCCCGACCAAGCCGCA TTCGCCAAAGCGCTCTGGGAACGAATTAGACGAGAATTCCCCGAACTTCGCATTTATAGATTCTTCGACCGGCCG ATTGGCCCGCATCCGGTGGCAATGTTCGAAGTGAATCTGTTCACACCTGCGCAGTTTGGAGCCTTCGTTCCTTGG CTGTATATCCTCGAATCCCATGCCCATGACGAGGTCATGCCGATAAACATTTGGGTTAAACATCGCTTACTCGAG GACAAGCCACACAAGATGCGTCTTTTCATATCGTTGGCGGTAGTCGGTCTATCTTCAACCAAACCGGCCTGGGCA TCCCTCGGCGACAGGGCTACTGATGTCCCGCCATATGTCTTAGAATATGCACCCTTGATCTGGCTCCATAGCCAG GAAACATACATGCCGAGCGATATCCAACAGCAGCTCGATCACACCAGACCCAATGTCAACTGGAGGGCCATCGAG GGAGTGGAATCACCCTTGACCCTTAACAACCTCGACACGCTCAATTCGATGGGTAATACGAGCGTCTACCTAACA TCTCTAGAGGGCATCGAAGCCAACCCAGAGCCAGCCTGGTTCCGAGGGATCAGACCGGACGCCCAGGGACGAACA GTTGATGGTACATCGAGTGTCCTTATCATCGCAGACCGTGGCAACGGAACCGTTGATGCGTTCTACTTCTACTTC TATGCATTCAACAAAGGCGGCAAAGTCCTAGGCCTGGAATTTGGCGACCACATCGGAGACTGGGAACATAACATG ATCCGCTTCGTCAACGGCACACCCGACGCAATATGGTACAGTCAGCATGCTAGCGGCCAGGCGTTCAGCTACGCC GCCGTTGAAAAGAAGGACAAGCGGCCGTATGTGTACTCTGCAGTCGGTACGCATGCAAACTATGCAATTCCAGGA AAACACGACCACACCTTCCCGGGCTTCAACCTGCCTGCAGGGTTTCTGTTGGACTATACGGACCGCGGCGTGCTG TGGGATCCCATGCTCAATGTATACACTTATACCTATGATGGAACAACAGCTGCGTTCCAGGCGGTGGACTCTAAA GATCCCGTGGCGTGGTTGGAGTTCAATGGGAGATGGGGTGACGACCAGCCGCCTAATGAGCCTACGCTCTTCGGT GAGGCCAAGAATGTGGCTGGTCCTAATGGTCCTAGGTTCAAGAGCTTGGATAGACAGCTGGTGTGTCCTTCCAAG CCGTGCTTTGTGCTTCCGTTCAGGACTTTCTCCGTGGATGCGGCTTAA |
Transcript | >Pro_DTO070G2_2|g472.t1 ATGACAGACGCATTCGCTTTCTCATACCCATCTCCATTGGCGGGGTACGAAAACCTCGAGCCGCTATCCGACGAG CGCGCCGAAGACGGCAAGTCAATGAAAAATCCCCAACATGGCATATTAAGCAAAGCCTACTCGGAATTCCCCGAC CCTCTCTCCAAAGGCCGGGAAGGTGGCTTCGACGTCCACATCTATCATTTCCAAAACAGCCCCGACCAAGCCGCA TTCGCCAAAGCGCTCTGGGAACGAATTAGACGAGAATTCCCCGAACTTCGCATTTATAGATTCTTCGACCGGCCG ATTGGCCCGCATCCGGTGGCAATGTTCGAAGTGAATCTGTTCACACCTGCGCAGTTTGGAGCCTTCGTTCCTTGG CTGTATATCCTCGAATCCCATGCCCATGACGAGGTCATGCCGATAAACATTTGGGTTAAACATCGCTTACTCGAG GACAAGCCACACAAGATGCGTCTTTTCATATCGTTGGCGGTAGTCGGTCTATCTTCAACCAAACCGGCCTGGGCA TCCCTCGGCGACAGGGCTACTGATGTCCCGCCATATGTCTTAGAATATGCACCCTTGATCTGGCTCCATAGCCAG GAAACATACATGCCGAGCGATATCCAACAGCAGCTCGATCACACCAGACCCAATGTCAACTGGAGGGCCATCGAG GGAGTGGAATCACCCTTGACCCTTAACAACCTCGACACGCTCAATTCGATGGGTAATACGAGCGTCTACCTAACA TCTCTAGAGGGCATCGAAGCCAACCCAGAGCCAGCCTGGTTCCGAGGGATCAGACCGGACGCCCAGGGACGAACA GTTGATGGTACATCGAGTGTCCTTATCATCGCAGACCGTGGCAACGGAACCGTTGATGCGTTCTACTTCTACTTC TATGCATTCAACAAAGGCGGCAAAGTCCTAGGCCTGGAATTTGGCGACCACATCGGAGACTGGGAACATAACATG ATCCGCTTCGTCAACGGCACACCCGACGCAATATGGTACAGTCAGCATGCTAGCGGCCAGGCGTTCAGCTACGCC GCCGTTGAAAAGAAGGACAAGCGGCCGTATGTGTACTCTGCAGTCGGTACGCATGCAAACTATGCAATTCCAGGA AAACACGACCACACCTTCCCGGGCTTCAACCTGCCTGCAGGGTTTCTGTTGGACTATACGGACCGCGGCGTGCTG TGGGATCCCATGCTCAATGTATACACTTATACCTATGATGGAACAACAGCTGCGTTCCAGGCGGTGGACTCTAAA GATCCCGTGGCGTGGTTGGAGTTCAATGGGAGATGGGGTGACGACCAGCCGCCTAATGAGCCTACGCTCTTCGGT GAGGCCAAGAATGTGGCTGGTCCTAATGGTCCTAGGTTCAAGAGCTTGGATAGACAGCTGGTGTGTCCTTCCAAG CCGTGCTTTGTGCTTCCGTTCAGGACTTTCTCCGTGGATGCGGCTTAA |
Gene | >Pro_DTO070G2_2|g472.t1 ATGACAGACGCATTCGCTTTCTCATACCCATCTCCATTGGCGGGGTACGAAAACCTCGAGCCGCTATCCGAGTAA GTGTCCCGCAACCACATCTAATCCAAGACACTTATCATCTACCGCAGCGAGCGCGCCGAAGACGGCAAGTCAATG AAAAATCCCCAACATGGCATATTAAGCAAAGCCTACTCGGAATTCCCCGACCCTCTCTCCAAAGGCCGGGAAGGT GGCTTCGACGTCCACATCTATCATTTCCAAGTAAGTGCAGGTGCCGCCGCCGGGCCCCAAAGCCAAGCGACAATG AAACTGACGCATCGACCAGAACAGCCCCGACCAAGCCGCATTCGCCAAAGCGCTCTGGGAACGAATTAGACGAGA ATGTAAGCAGCGCACTCTTCCAGCCCAGGAACGGAACTGCAGGTCTGGCCGTCTACCGCGGGGTCGGGGTCGGGT TGCTCATCTCAATTGATCTCTTGCTTATGCTTCGTAAACAGTCCCCGAACTTCGCATTTATAGATTCTTCGACCG GCCGATTGGCCCGCATCCGGTGGCAATGTTCGAAGTGAATCTGTTCACACCTGCGCAGTTTGGAGCCTTCGTTCC TTGGCTGGTTATTAACCGGGGTCCGCTTAGTGCTCTCGTTCACCCTAATACTGTGGCGTCGGAAGATGAGCGAAA TCACACCCAACGTGCCACTTGGCTTGGGGATCGGATTCCGTTGGATTTGAGGGTTTTTAGGCTGAGGAAGGACTA GTTGAAGCAGGAGAGGCTGGATTCATGAATTCGGTTAAGAAAGTACAAATGCACAAATGAAAATTATATATAGAG GAAAGTCCAGCTCAATATATAGTATGTACTATTAATTTTGGTCATGGGATCAACATGTGATAATGAAGAGCGACT AGATCTCATCGTGGCCGACATGTTGGTACTATACATGGTTTCGATGGAGAATGCTGAATACGGTAACTGATATTA TGAAGAGTAAAACAAAAGATAGGTACAACGGCTGGTACAGGTAGGCGATTTTATTGGTGGGACTCACCATTTTAT ACAGATGCATATAATTACAAGTAACTCAACCTGATTCGATACAAGCCCGAACATTCGTCGTGATAGCTTCATGGG CAGGTGACATCATTAATTTAGAGCAATGATATTCAGCCATGGGATCTGATGCAGATCGCACTATTATTATGACCA CCTGGGCACTAAAAGACATATTGTGACTCTTGTACTGCACCCACGAGGCACCTGATATAAGGCTCACATTCCTGA GGGTTGCATATTGCATACTTTATGCCGGAGGATAAAGGAGGTAAACAAAGAACTTTTCAACAATCACACTCTATT GCAGGAGAGATACCACCTGAGTACACCTTGGGATTGTCCACGGCCTCACTTTCTTGTGTCTGAGATTGAAACTCC GATCCGCTGCTCGGAACACTGGCATGATCCCCGTCAAGGAGACGCATACACTTCGAGGAATCAATAGCATCGCTG GAATAGCAGAAGACCTTGTGATTATGAAATTCTATTACTTCGAATTTCGTATCTGCTTCTCGCCCCGTAGTATAT CCTCGAATCCCATGCCCATGACGAGGTCATGCCGATAAACATTTGGGTTAAACATCGCTGTAAGTGCAAGGTATG ATTGTCCTCATAGAGATTAAAAGGGCGCTTGTCGCTCTCCAGTACTCGAGGACAAGCCACACAAGATGCGTCTTT TCATATCGTTGGCGGTAGTCGGTCTATCTTCAACCAAACCGGCCTGGGCATCCCTCGGCGACAGGGCTACTGATG TCCCGCCATATGTCTTAGAATATGGTAAACAAACCATGCGATACATGGTATTGATGATGATCTGAGTTTACTTAT TCTGCCCTACAGCACCCTTGATCTGGCTCCATAGCCAGGAAACATACATGCCGAGCGATATCCAACAGCAGCTCG ATCACACCAGACCCAATGTCAACTGGAGGGCCATCGAGGGAGTGGAATCACCCTTGACCCTTAACAACCTCGACA CGCTCAATTCGATGGGTAATACGAGCGTCTACCTAACATCTCTAGAGGGCATCGAAGCCAACCCAGAGCCAGCCT GGTTCCGAGGGATCAGACCGGACGCCCAGGGACGAACAGTTGATGGTACATCGAGTGTCCTTATCATCGCAGACC GTGGCAACGGAACCGTTGATGCGTTCTACTTCTACTTCTATGCGTAAGCTCGACTGTACCTAAGTTAAGTCTACA TTTATACTGATCGATCCAGATTCAACAAAGGCGGCAAAGTCCTAGGCCTGGAATTTGGCGACCACATCGGAGACT GGTTAGTGTGAAGAATTGCCTGGGTAGAGTCGTTCTAGCTGACAATAAAGGGAACATAACATGATCCGCTTCGTC AACGGCACACCCGACGCAATATGGTACAGTCAGCATGCTAGCGGCCAGGCGTTCAGCTACGCCGCCGTTGAAAAG AAGGACAAGCGGCCGTATGTGTACTCTGCAGTCGGTACGCATGCAAACTATGCAATTCCAGGGTAAGTCTAGATA AGTTTCTGTAGTCTGGCGGATGGCAAGACTGATACACACAGAAAACACGACCACACCTTCCCGGGCTTCAACCTG CCTGCAGGGTTTCTGTTGGACTATACGGACCGCGGCGTGCTGTGGGATCCCATGCTCAATGTATACACTTATACC TATGATGGAACAACAGCTGCGTTCCAGGCGGTGGACTCTAAAGATCCCGTGGCGTGGTTGGAGTTCAATGGGAGA TGGGGTGACGACCAGCCGCCTAATGAGCCTACGCTCTTCGGTGAGGCCAAGAATGTGGCTGGTCCTAATGGTCCT AGGTTCAAGAGCTTGGATAGACAGCTGGTGTGTCCTTCCAAGCCGTGCTTTGTGCTTCCGTTCAGGACTTTCTCC GTGGATGCGGCTTAA |