© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g4549.t1 |
| Gene name | |
| Location | scaffold_05:306845..308599 |
| Strand | + |
| Gene length (bp) | 1754 |
| Transcript length (bp) | 1641 |
| Coding sequence length (bp) | 1641 |
| Protein length (aa) | 547 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.0E-28 | 55 | 431 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 42 | 64 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 113 | 135 | 22 |
| 4 | 140 | 162 | 22 |
| 5 | 171 | 193 | 22 |
| 6 | 203 | 225 | 22 |
| 7 | 245 | 267 | 22 |
| 8 | 277 | 299 | 22 |
| 9 | 319 | 341 | 22 |
| 10 | 351 | 373 | 22 |
| 11 | 380 | 399 | 19 |
| 12 | 414 | 436 | 22 |
| 13 | 457 | 479 | 22 |
| 14 | 523 | 542 | 19 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 13 | Decorating |
| Orthofinder run ID | 2 |
| Orthogroup | 4588 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g4549.t1 MSVDNPTPSDSVLESQTPDRVDESIIKAADAEKDAAPRREIVGLRWLLVCIAVFSANLLYGLDNTIVADIQGPIA GDFDEYTRLGWLGVGFTLGSVVFILPLGKAYAIFDTKWLFLGCLTMFAAGSALCGAAPSMNAIIVGRVWAGAGGA GMYLGNLNLITILTTPTEQPVYVGLVGLIYGTGCILGPIIGGAFSDSSATWRWSFYLNLVIFGVMSPIYVFLLPS LPRPAGEGRSFIKKLVELDWVGTLLSAGMHISIILFIVFGGVEWSWTDGRNIALYVVSAVCTIAFVLSQYYCVGT DKQNRLFPCEFLRNPTMLLLYVIMACGGASLFVAVYYIPLYFQFIQGDSGIMSAVRLLPFVCFYVATILLCGWVM PKTGFFILWYLVSGIFILIGAVLMYTVKLGTSPSSIYGYSILMGLGMTTTQAAYAVGPTIVSPDRVAECLQFMNI GQGQSQLLGLAIASAIFQSKTLTGLTTLLGNKGYSHADIQGAVAGAQSTLMERLPQALKTEALEVIVNSISDVYV MAISAGALYVVASCLLPRRRF* |
| Coding | >Pro_DTO070G2_2|g4549.t1 ATGAGTGTAGACAATCCGACGCCGAGTGATAGCGTGCTCGAAAGTCAAACCCCAGATCGTGTGGACGAATCAATC ATCAAAGCTGCGGATGCCGAGAAGGACGCAGCCCCACGCCGAGAAATTGTAGGCCTCCGCTGGCTGCTCGTCTGC ATTGCTGTTTTCTCAGCCAATCTGCTCTATGGTTTGGACAATACCATCGTGGCAGACATCCAGGGTCCCATTGCG GGTGACTTTGATGAATACACGCGGCTGGGCTGGCTCGGGGTGGGCTTCACTTTGGGATCGGTGGTTTTCATTCTC CCACTGGGAAAAGCTTACGCCATCTTCGACACGAAATGGCTCTTTCTCGGTTGTTTGACTATGTTTGCGGCCGGT AGTGCCCTCTGCGGTGCTGCCCCCAGTATGAATGCCATCATTGTCGGGCGTGTGTGGGCGGGAGCCGGAGGAGCG GGCATGTATCTGGGGAATCTGAATCTGATTACTATCCTGACCACCCCTACGGAGCAGCCTGTGTATGTGGGTCTG GTTGGATTGATCTACGGCACCGGCTGTATTCTGGGTCCCATCATTGGCGGTGCTTTTTCCGATAGTTCAGCTACT TGGCGATGGTCATTTTATCTCAATCTGGTCATTTTCGGAGTCATGTCGCCCATCTATGTTTTCCTCTTGCCTTCC TTGCCACGTCCAGCGGGCGAAGGCCGCAGCTTCATCAAGAAGCTTGTGGAGCTGGACTGGGTGGGAACTCTCCTG TCCGCGGGCATGCACATCTCCATTATCTTGTTCATCGTATTTGGTGGTGTCGAATGGTCCTGGACGGATGGGCGG AATATCGCGCTGTACGTGGTCTCCGCTGTCTGCACTATTGCCTTCGTGCTCAGCCAGTACTATTGTGTGGGGACC GACAAACAAAACCGACTGTTCCCCTGCGAGTTCTTGCGGAACCCTACAATGCTCCTCCTTTACGTCATAATGGCC TGTGGCGGTGCCTCGCTCTTCGTGGCGGTTTACTATATCCCACTTTACTTCCAGTTCATCCAGGGTGACTCCGGC ATCATGTCCGCGGTGCGGCTGTTGCCGTTCGTCTGCTTCTACGTGGCTACAATTCTGCTTTGTGGTTGGGTCATG CCCAAGACTGGCTTCTTCATCCTCTGGTACCTGGTCAGCGGCATCTTTATTCTCATTGGAGCCGTGTTGATGTAC ACTGTGAAATTGGGTACCAGTCCCTCCAGCATCTACGGGTACTCTATCCTGATGGGGTTGGGCATGACCACCACG CAGGCCGCCTATGCGGTTGGACCGACCATTGTGAGCCCCGATCGGGTGGCCGAGTGCCTCCAGTTCATGAACATC GGCCAGGGCCAGAGTCAACTGTTGGGATTGGCTATTGCAAGTGCCATTTTCCAGAGTAAGACCCTCACCGGGCTT ACTACCCTCTTGGGAAACAAAGGATATTCACATGCGGACATCCAGGGTGCGGTTGCTGGCGCTCAGAGTACCCTG ATGGAGCGGCTGCCCCAGGCCTTGAAGACAGAAGCTCTGGAAGTGATTGTGAATTCGATTAGTGATGTCTACGTG ATGGCGATTTCGGCGGGGGCTCTCTACGTGGTTGCATCATGTCTGTTGCCTCGCCGTCGGTTCTAG |
| Transcript | >Pro_DTO070G2_2|g4549.t1 ATGAGTGTAGACAATCCGACGCCGAGTGATAGCGTGCTCGAAAGTCAAACCCCAGATCGTGTGGACGAATCAATC ATCAAAGCTGCGGATGCCGAGAAGGACGCAGCCCCACGCCGAGAAATTGTAGGCCTCCGCTGGCTGCTCGTCTGC ATTGCTGTTTTCTCAGCCAATCTGCTCTATGGTTTGGACAATACCATCGTGGCAGACATCCAGGGTCCCATTGCG GGTGACTTTGATGAATACACGCGGCTGGGCTGGCTCGGGGTGGGCTTCACTTTGGGATCGGTGGTTTTCATTCTC CCACTGGGAAAAGCTTACGCCATCTTCGACACGAAATGGCTCTTTCTCGGTTGTTTGACTATGTTTGCGGCCGGT AGTGCCCTCTGCGGTGCTGCCCCCAGTATGAATGCCATCATTGTCGGGCGTGTGTGGGCGGGAGCCGGAGGAGCG GGCATGTATCTGGGGAATCTGAATCTGATTACTATCCTGACCACCCCTACGGAGCAGCCTGTGTATGTGGGTCTG GTTGGATTGATCTACGGCACCGGCTGTATTCTGGGTCCCATCATTGGCGGTGCTTTTTCCGATAGTTCAGCTACT TGGCGATGGTCATTTTATCTCAATCTGGTCATTTTCGGAGTCATGTCGCCCATCTATGTTTTCCTCTTGCCTTCC TTGCCACGTCCAGCGGGCGAAGGCCGCAGCTTCATCAAGAAGCTTGTGGAGCTGGACTGGGTGGGAACTCTCCTG TCCGCGGGCATGCACATCTCCATTATCTTGTTCATCGTATTTGGTGGTGTCGAATGGTCCTGGACGGATGGGCGG AATATCGCGCTGTACGTGGTCTCCGCTGTCTGCACTATTGCCTTCGTGCTCAGCCAGTACTATTGTGTGGGGACC GACAAACAAAACCGACTGTTCCCCTGCGAGTTCTTGCGGAACCCTACAATGCTCCTCCTTTACGTCATAATGGCC TGTGGCGGTGCCTCGCTCTTCGTGGCGGTTTACTATATCCCACTTTACTTCCAGTTCATCCAGGGTGACTCCGGC ATCATGTCCGCGGTGCGGCTGTTGCCGTTCGTCTGCTTCTACGTGGCTACAATTCTGCTTTGTGGTTGGGTCATG CCCAAGACTGGCTTCTTCATCCTCTGGTACCTGGTCAGCGGCATCTTTATTCTCATTGGAGCCGTGTTGATGTAC ACTGTGAAATTGGGTACCAGTCCCTCCAGCATCTACGGGTACTCTATCCTGATGGGGTTGGGCATGACCACCACG CAGGCCGCCTATGCGGTTGGACCGACCATTGTGAGCCCCGATCGGGTGGCCGAGTGCCTCCAGTTCATGAACATC GGCCAGGGCCAGAGTCAACTGTTGGGATTGGCTATTGCAAGTGCCATTTTCCAGAGTAAGACCCTCACCGGGCTT ACTACCCTCTTGGGAAACAAAGGATATTCACATGCGGACATCCAGGGTGCGGTTGCTGGCGCTCAGAGTACCCTG ATGGAGCGGCTGCCCCAGGCCTTGAAGACAGAAGCTCTGGAAGTGATTGTGAATTCGATTAGTGATGTCTACGTG ATGGCGATTTCGGCGGGGGCTCTCTACGTGGTTGCATCATGTCTGTTGCCTCGCCGTCGGTTCTAG |
| Gene | >Pro_DTO070G2_2|g4549.t1 ATGAGTGTAGACAATCCGACGCCGAGTGATAGCGTGCTCGAAAGTCAAACCCCAGATCGTGTGGACGAATCAATC ATCAAAGCTGCGGATGCCGAGAAGGACGCAGCCCCACGCCGAGAAATTGTAGGCCTCCGCTGGCTGCTCGTCTGC ATTGCTGTTTTCTCAGCCAATCTGCTCTATGGTTTGGACAATACCATCGTGGCAGACATCCAGGGTCCCATTGCG GGTGACTTTGATGAATACACGCGGCTGGGCTGGCTCGGGGTGGGCTTCACTTTGGGATCGGTGGTTTTCATTCTC CCACTGGGAAAAGCTTACGCCATCTTCGACACGAAATGGCTCTTTCTCGGTTGTTTGACTATGTTTGCGGCCGGT AGTGCCCTCTGCGGTGCTGCCCCCAGTATGAATGCCATCATTGTCGGGCGTGTGTGGGCGGGAGCCGGAGGAGCG GGCATGTATCTGGGGTAAGTTGTACCACGACGGGCAGAGTGCAGAGAGAGAAGACTAACCATGACAACCTAGGAA TCTGAATCTGATTACTATCCTGACCACCCCTACGGAGCAGCCTGTGTATGTGGGTCTGGTTGGATTGATCTACGG CACCGGCTGTATTCTGGGTCCCATCATTGGCGGTGCTTTTTCCGATAGTTCAGCTACTTGGCGATGGGTACGTGT GGTCTCTTTCTAGTTTCCTCAGCGAGTGTGCTAACCGTAATGAATAGTCATTTTATCTCAATCTGGTCATTTTCG GAGTCATGTCGCCCATCTATGTTTTCCTCTTGCCTTCCTTGCCACGTCCAGCGGGCGAAGGCCGCAGCTTCATCA AGAAGCTTGTGGAGCTGGACTGGGTGGGAACTCTCCTGTCCGCGGGCATGCACATCTCCATTATCTTGTTCATCG TATTTGGTGGTGTCGAATGGTCCTGGACGGATGGGCGGAATATCGCGCTGTACGTGGTCTCCGCTGTCTGCACTA TTGCCTTCGTGCTCAGCCAGTACTATTGTGTGGGGACCGACAAACAAAACCGACTGTTCCCCTGCGAGTTCTTGC GGAACCCTACAATGCTCCTCCTTTACGTCATAATGGCCTGTGGCGGTGCCTCGCTCTTCGTGGCGGTTTACTATA TCCCACTTTACTTCCAGTTCATCCAGGGTGACTCCGGCATCATGTCCGCGGTGCGGCTGTTGCCGTTCGTCTGCT TCTACGTGGCTACAATTCTGCTTTGTGGTTGGGTCATGCCCAAGACTGGCTTCTTCATCCTCTGGTACCTGGTCA GCGGCATCTTTATTCTCATTGGAGCCGTGTTGATGTACACTGTGAAATTGGGTACCAGTCCCTCCAGCATCTACG GGTACTCTATCCTGATGGGGTTGGGCATGACCACCACGCAGGCCGCCTATGCGGTTGGACCGACCATTGTGAGCC CCGATCGGGTGGCCGAGTGCCTCCAGTTCATGAACATCGGCCAGGGCCAGAGTCAACTGTTGGGATTGGCTATTG CAAGTGCCATTTTCCAGAGTAAGACCCTCACCGGGCTTACTACCCTCTTGGGAAACAAAGGATATTCACATGCGG ACATCCAGGGTGCGGTTGCTGGCGCTCAGAGTACCCTGATGGAGCGGCTGCCCCAGGCCTTGAAGACAGAAGCTC TGGAAGTGATTGTGAATTCGATTAGTGATGTCTACGTGATGGCGATTTCGGCGGGGGCTCTCTACGTGGTTGCAT CATGTCTGTTGCCTCGCCGTCGGTTCTAG |