Protein ID | Pro_DTO070G2_2|g4534.t1 |
Gene name | |
Location | scaffold_05:258591..260636 |
Strand | - |
Gene length (bp) | 2045 |
Transcript length (bp) | 1767 |
Coding sequence length (bp) | 1767 |
Protein length (aa) | 589 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06101 | Vps62 | Vacuolar protein sorting-associated protein 62 | 3.8E-11 | 397 | 462 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 24 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g4534.t1 MGSFLRIPTALLCALLVSTFVISRPTIVPGECPPAAALSLESHCIEPLASTGIPELAVYEHTPHSSSTLTVYVDS LQQMTRKAKATIGVLSTLIAYVSINSLIHILRPGAFVWSTEDEEERSWIASSRSWFDRKSCRWLGVCGAAHIQTV HGAFGHRDPAQWVKAQDAEPEAPWRSFWLSGASDSEWDAEERARRQIPDYVFHYAPLVHLYSGEQFWPGDIAEHL YHTTPTLNYTPIQAQWDHPTLADLDELNQWGPRHVFLTSNDDAQTRPHWLEGDKNIPQADGDDKEESWADWDGRV DGDIPGDTEEDRAKWYDYYQLQQEAAESDADEHSEAQEILREEIRRRYGGEEIHQDAAGGRSDAPAILVVMDKGN GIVDAFWFYFYSFNLGNTVANVRFGNHVGDWEHCLVRFHNGNPKALFFSAHQGGEAYSYEAVEKIGQRPVIYSAE GSHAMYATAGVHDYLLPWGMLHDVTDRGPLWDPLLNSQAYTYDFDNEHLRASTFTPSAPTEWFHYRGHWGDKFYP LSDPRQYRFAGQYHFVNGPIGPKFKHLNRHKVCQGPDRSPCVVKNYVEQGKRPKRWGASRPGE* |
Coding | >Pro_DTO070G2_2|g4534.t1 ATGGGATCATTTCTTCGTATCCCCACGGCCCTGTTGTGCGCCCTCCTTGTCTCAACTTTTGTTATCTCTCGTCCC ACTATAGTCCCTGGGGAATGCCCACCCGCTGCAGCCCTATCACTTGAATCCCACTGCATTGAACCGCTAGCCTCG ACTGGAATTCCCGAACTCGCAGTCTATGAACATACCCCACATAGTTCTTCTACTTTGACAGTCTATGTCGACTCG CTCCAGCAGATGACCCGGAAGGCCAAGGCAACCATTGGCGTGCTCTCGACTCTGATAGCGTATGTGTCTATCAAC AGCTTAATACACATCCTCCGGCCGGGCGCTTTTGTCTGGTCTACCGAGGACGAGGAGGAGCGGAGCTGGATTGCG AGCTCGCGCTCGTGGTTCGACCGCAAATCCTGCCGGTGGCTGGGCGTCTGCGGCGCCGCCCATATACAAACCGTT CACGGCGCATTTGGACATCGCGATCCGGCGCAGTGGGTGAAAGCGCAAGATGCCGAGCCAGAGGCACCATGGCGG TCTTTCTGGCTTAGCGGCGCTAGTGACTCCGAGTGGGATGCCGAGGAGCGGGCTCGGCGGCAGATCCCGGACTAC GTTTTCCACTATGCCCCACTCGTTCACCTTTATTCCGGTGAGCAATTCTGGCCGGGGGATATCGCAGAGCACTTG TACCACACCACTCCGACCCTGAATTACACCCCGATTCAAGCCCAATGGGACCATCCGACGCTGGCCGATCTGGAT GAGTTGAACCAGTGGGGCCCACGGCACGTTTTTTTGACGAGCAATGACGATGCGCAGACGCGTCCACACTGGCTG GAAGGCGATAAGAATATCCCGCAAGCAGATGGGGACGATAAAGAAGAATCCTGGGCTGATTGGGATGGTCGAGTC GACGGTGATATCCCTGGCGACACGGAGGAAGATCGCGCCAAGTGGTATGATTATTACCAATTGCAACAAGAAGCT GCCGAATCGGACGCCGACGAACATTCTGAAGCTCAGGAAATACTCAGAGAAGAGATCCGACGACGTTACGGTGGA GAGGAGATCCACCAGGATGCTGCCGGTGGTCGAAGCGATGCCCCTGCAATCCTGGTGGTGATGGACAAGGGCAAC GGAATTGTCGATGCGTTCTGGTTCTACTTTTATAGCTTCAACCTCGGTAACACTGTCGCCAACGTCCGGTTTGGC AATCACGTTGGCGACTGGGAGCATTGTCTGGTGCGATTCCACAATGGCAACCCGAAAGCGCTCTTCTTCAGCGCC CACCAGGGCGGAGAGGCTTATAGCTACGAAGCCGTTGAGAAGATCGGACAACGACCCGTCATCTACTCTGCCGAG GGCAGTCATGCCATGTATGCCACGGCCGGAGTGCACGATTACCTTCTTCCCTGGGGAATGCTGCACGATGTAACT GATCGCGGTCCACTATGGGATCCTCTCCTCAACTCGCAAGCCTACACATATGACTTTGACAACGAACATTTGCGG GCGTCCACATTCACCCCCTCTGCGCCAACGGAATGGTTCCATTACAGGGGCCACTGGGGTGACAAGTTCTACCCA CTAAGTGATCCCCGTCAGTATCGATTTGCAGGCCAATACCATTTCGTGAACGGACCTATTGGCCCGAAGTTCAAA CACCTCAACCGTCACAAGGTGTGTCAAGGACCCGATCGTTCCCCCTGTGTCGTCAAGAACTATGTCGAGCAAGGC AAGCGACCCAAGCGGTGGGGCGCAAGCAGACCGGGAGAGTAG |
Transcript | >Pro_DTO070G2_2|g4534.t1 ATGGGATCATTTCTTCGTATCCCCACGGCCCTGTTGTGCGCCCTCCTTGTCTCAACTTTTGTTATCTCTCGTCCC ACTATAGTCCCTGGGGAATGCCCACCCGCTGCAGCCCTATCACTTGAATCCCACTGCATTGAACCGCTAGCCTCG ACTGGAATTCCCGAACTCGCAGTCTATGAACATACCCCACATAGTTCTTCTACTTTGACAGTCTATGTCGACTCG CTCCAGCAGATGACCCGGAAGGCCAAGGCAACCATTGGCGTGCTCTCGACTCTGATAGCGTATGTGTCTATCAAC AGCTTAATACACATCCTCCGGCCGGGCGCTTTTGTCTGGTCTACCGAGGACGAGGAGGAGCGGAGCTGGATTGCG AGCTCGCGCTCGTGGTTCGACCGCAAATCCTGCCGGTGGCTGGGCGTCTGCGGCGCCGCCCATATACAAACCGTT CACGGCGCATTTGGACATCGCGATCCGGCGCAGTGGGTGAAAGCGCAAGATGCCGAGCCAGAGGCACCATGGCGG TCTTTCTGGCTTAGCGGCGCTAGTGACTCCGAGTGGGATGCCGAGGAGCGGGCTCGGCGGCAGATCCCGGACTAC GTTTTCCACTATGCCCCACTCGTTCACCTTTATTCCGGTGAGCAATTCTGGCCGGGGGATATCGCAGAGCACTTG TACCACACCACTCCGACCCTGAATTACACCCCGATTCAAGCCCAATGGGACCATCCGACGCTGGCCGATCTGGAT GAGTTGAACCAGTGGGGCCCACGGCACGTTTTTTTGACGAGCAATGACGATGCGCAGACGCGTCCACACTGGCTG GAAGGCGATAAGAATATCCCGCAAGCAGATGGGGACGATAAAGAAGAATCCTGGGCTGATTGGGATGGTCGAGTC GACGGTGATATCCCTGGCGACACGGAGGAAGATCGCGCCAAGTGGTATGATTATTACCAATTGCAACAAGAAGCT GCCGAATCGGACGCCGACGAACATTCTGAAGCTCAGGAAATACTCAGAGAAGAGATCCGACGACGTTACGGTGGA GAGGAGATCCACCAGGATGCTGCCGGTGGTCGAAGCGATGCCCCTGCAATCCTGGTGGTGATGGACAAGGGCAAC GGAATTGTCGATGCGTTCTGGTTCTACTTTTATAGCTTCAACCTCGGTAACACTGTCGCCAACGTCCGGTTTGGC AATCACGTTGGCGACTGGGAGCATTGTCTGGTGCGATTCCACAATGGCAACCCGAAAGCGCTCTTCTTCAGCGCC CACCAGGGCGGAGAGGCTTATAGCTACGAAGCCGTTGAGAAGATCGGACAACGACCCGTCATCTACTCTGCCGAG GGCAGTCATGCCATGTATGCCACGGCCGGAGTGCACGATTACCTTCTTCCCTGGGGAATGCTGCACGATGTAACT GATCGCGGTCCACTATGGGATCCTCTCCTCAACTCGCAAGCCTACACATATGACTTTGACAACGAACATTTGCGG GCGTCCACATTCACCCCCTCTGCGCCAACGGAATGGTTCCATTACAGGGGCCACTGGGGTGACAAGTTCTACCCA CTAAGTGATCCCCGTCAGTATCGATTTGCAGGCCAATACCATTTCGTGAACGGACCTATTGGCCCGAAGTTCAAA CACCTCAACCGTCACAAGGTGTGTCAAGGACCCGATCGTTCCCCCTGTGTCGTCAAGAACTATGTCGAGCAAGGC AAGCGACCCAAGCGGTGGGGCGCAAGCAGACCGGGAGAGTAG |
Gene | >Pro_DTO070G2_2|g4534.t1 ATGGGATCATTTCTTCGTAAGTTCCCGTCCCTTCCGCTCCGGCTTTCGACGGATAAGCTCATGTACTCGGTATAT GGCATCCGGCTTGGCTATGATTTCGACCCATTTCCGCAGGTTCCCGGTCTGACTAGCTCGCGATATTGGATCATC CTATGCCATTTTTCTTCCTTTACCTTCTTGTCTTCTTAGTCGGGAAATTCTCGGGCTCGCTAACAAAGGGACCGT GTGTTTTTATATAGGTATCCCCACGGCCCTGTTGTGCGCCCTCCTTGTCTCAACTTTTGTTATCTCTCGTCCCAC TATAGTCCCTGGGGAATGCCCACCCGCTGCAGCCCTATCACTTGAATCCCACTGCATTGAACCGCTAGCCTCGAC TGGAATTCCCGAACTCGCAGTCTATGAACATACCCCACATAGTTCTTCTACTTTGACAGTCTATGTCGACTCGCT CCAGCAGATGACCCGGAAGGCCAAGGCAACCATTGGCGTGCTCTCGACTCTGATAGCGTATGTGTCTATCAACAG CTTAATACACATCCTCCGGCCGGGCGCTTTTGTCTGGTCTACCGAGGACGAGGAGGAGCGGAGCTGGATTGCGAG CTCGCGCTCGTGGTTCGACCGCAAATCCTGCCGGTGGCTGGGCGTCTGCGGCGCCGCCCATATACAAACCGTTCA CGGCGCATTTGGACATCGCGATCCGGCGCAGTGGGTGAAAGCGCAAGATGCCGAGCCAGAGGCACCATGGCGGTC TTTCTGGCTTAGCGGCGCTAGTGACTCCGAGTGGGATGCCGAGGAGCGGGCTCGGCGGCAGATCCCGGACTACGT TTTCCACTATGCCCCACTCGTTCACCTTTATTCCGGTGAGCAATTCTGGCCGGGGGATATCGCAGAGCACTTGTA CCACACCACTCCGACCCTGAATTACACCCCGATTCAAGCCCAATGGGACCATCCGACGCTGGCCGATCTGGATGA GTTGAACCAGTGGGGCCCACGGCACGTTTTTTTGACGAGCAATGACGATGCGCAGACGCGTCCACACTGGCTGGA AGGCGATAAGAATATCCCGCAAGCAGATGGGGACGATAAAGAAGAATCCTGGGCTGATTGGGATGGTCGAGTCGA CGGTGATATCCCTGGCGACACGGAGGAAGATCGCGCCAAGTGGTATGATTATTACCAATTGCAACAAGAAGCTGC CGAATCGGACGCCGACGAACATTCTGAAGCTCAGGAAATACTCAGAGAAGAGATCCGACGACGTTACGGTGGAGA GGAGATCCACCAGGATGCTGCCGGTGGTCGAAGCGATGCCCCTGCAATCCTGGTGGTGATGGACAAGGGCAACGG AATTGTCGATGCGTTCTGGTTCTACTTTTATAGCTTCAACCTCGGTAACACTGTCGCCAACGTCCGGTTTGGCAA TCACGTTGGCGACTGGGAGCATTGTCTGGTGCGATTCCACAATGGCAACCCGAAAGCGCTCTTCTTCAGCGCCCA CCAGGGCGGAGAGGCTTATAGCTACGAAGCCGTTGAGAAGATCGGACAACGAGTGAGTTCCCAATTACACAAGCG GCAAGGATAACCTTACTAATATACCTTGCCAGCCCGTCATCTACTCTGCCGAGGGCAGTCATGCCATGTATGCCA CGGCCGGAGTGCACGATTACCTTCTTCCCTGGGGAATGCTGCACGATGTAACTGATCGCGGTCCACTATGGGATC CTCTCCTCAACTCGCAAGCCTACACATATGACTTTGACAACGAACATTTGCGGGCGTCCACATTCACCCCCTCTG CGCCAACGGAATGGTTCCATTACAGGGGCCACTGGGGTGACAAGTTCTACCCACTAAGTGATCCCCGTCAGTATC GATTTGCAGGCCAATACCATTTCGTGAACGGACCTATTGGCCCGAAGTTCAAACACCTCAACCGTCACAAGGTGT GTCAAGGACCCGATCGTTCCCCCTGTGTCGTCAAGAACTATGTCGAGCAAGGCAAGCGACCCAAGCGGTGGGGCG CAAGCAGACCGGGAGAGTAG |