Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g4508.t1
Gene name
Locationscaffold_05:191704..192830
Strand-
Gene length (bp)1126
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05652 DcpS Scavenger mRNA decapping enzyme (DcpS) N-terminal 3.9E-34 15 127
PF11969 DcpS_C Scavenger mRNA decapping enzyme C-term binding 7.6E-29 157 275

GO

GO Term Description Terminal node
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA Yes
GO:0016787 hydrolase activity Yes
GO:0110154 RNA decapping No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0044248 cellular catabolic process No
GO:0008150 biological_process No
GO:0009057 macromolecule catabolic process No
GO:1901361 organic cyclic compound catabolic process No
GO:0008152 metabolic process No
GO:0046700 heterocycle catabolic process No
GO:0048519 negative regulation of biological process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0044270 cellular nitrogen compound catabolic process No
GO:0010629 negative regulation of gene expression No
GO:0000956 nuclear-transcribed mRNA catabolic process No
GO:0009987 cellular process No
GO:0006402 mRNA catabolic process No
GO:0046483 heterocycle metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0019439 aromatic compound catabolic process No
GO:0044238 primary metabolic process No
GO:0034655 nucleobase-containing compound catabolic process No
GO:0019222 regulation of metabolic process No
GO:0110156 methylguanosine-cap decapping No
GO:0016071 mRNA metabolic process No
GO:0010605 negative regulation of macromolecule metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0065007 biological regulation No
GO:0006401 RNA catabolic process No
GO:0050789 regulation of biological process No
GO:0003824 catalytic activity No
GO:0043170 macromolecule metabolic process No
GO:0009892 negative regulation of metabolic process No
GO:0044237 cellular metabolic process No
GO:0010468 regulation of gene expression No
GO:0044265 cellular macromolecule catabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0071704 organic substance metabolic process No
GO:1901575 organic substance catabolic process No
GO:0009056 catabolic process No
GO:0016070 RNA metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup4550
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g5114.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g3074.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g9534.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g8346.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g9462.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g6904.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g7948.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g8142.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g8279.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8381.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g6212.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g6794.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g8053.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g5894.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g671.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g6360.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g8456.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g3794.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g4508.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g8271.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g7313.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g8925.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5287.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g8531.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g2702.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g3421.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g9616.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g9346.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g7301.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g7770.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g6128.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g4332.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g5535.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g8253.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g4508.t1
MADSAGTGKLAPEALITKFQVSKLLKQDQNGRRIALLGTIDNTQGILIAERAAFETESLAVLQAFHAAISRVNNL
GDNDIYRWYLASSNANNTAPTTPAEAANPQQDLKLNLIWPCTAQHIKKYSDQHLRMVTETAEIYRAHVRPFMQAK
REEGRLNWVFNILEGRTEQEDVVLRDEGLGPDDGFLMLPDLNWDRKSIGSLHLLALVQRRDIWSLRDLKKSFVPW
LKYLRGRVLEATVSMYPGLEEDQIKLYVHYQPTYYHFHIHVVNVMLEAGATQATGKAFGLENLISQLETLSGDGD
ASLADVDLTYFLGEANELWTDIFEPLKQGKQPREYKRAA*
Coding >Pro_DTO070G2_2|g4508.t1
ATGGCCGACTCTGCAGGCACCGGCAAGCTCGCCCCAGAGGCACTAATCACCAAATTTCAAGTGAGCAAGCTCCTC
AAACAAGACCAAAATGGCCGACGAATCGCCCTCCTAGGCACAATCGACAACACGCAAGGCATCCTAATAGCCGAG
CGCGCGGCATTCGAAACGGAATCCCTCGCCGTGCTACAAGCCTTCCACGCCGCAATCTCGCGAGTCAACAACCTA
GGCGACAACGACATCTACCGCTGGTATCTCGCGTCATCAAACGCCAACAACACGGCCCCGACCACTCCCGCGGAA
GCCGCGAACCCCCAGCAAGACCTCAAACTCAACCTCATCTGGCCATGCACCGCACAGCACATCAAGAAGTACTCG
GACCAGCATCTGCGCATGGTCACGGAGACGGCGGAGATATACCGTGCGCACGTGCGACCGTTCATGCAGGCGAAG
CGCGAGGAGGGGCGGCTGAACTGGGTGTTTAATATTCTTGAGGGCAGGACTGAGCAGGAGGATGTGGTTCTGCGG
GATGAGGGGCTCGGGCCTGATGATGGGTTTCTGATGTTACCGGATTTGAACTGGGATCGGAAGAGTATCGGGTCA
TTGCATTTGTTGGCTTTGGTGCAGAGGAGGGATATTTGGAGTTTGAGGGATCTGAAGAAGAGTTTTGTGCCTTGG
TTGAAATATTTGAGGGGGAGGGTGCTGGAGGCTACGGTTTCTATGTATCCTGGTTTGGAGGAGGATCAGATTAAG
CTTTACGTTCATTATCAACCGACTTACTACCATTTCCATATTCATGTTGTCAATGTTATGCTCGAAGCTGGTGCA
ACGCAGGCAACGGGCAAGGCGTTTGGGCTGGAGAACTTGATCTCGCAGCTTGAGACTTTGTCTGGGGATGGGGAT
GCTAGTCTGGCCGATGTTGATTTGACATACTTCCTGGGCGAGGCCAATGAGCTGTGGACGGATATTTTTGAGCCG
TTGAAGCAGGGGAAGCAACCTCGTGAATATAAGAGAGCTGCTTGA
Transcript >Pro_DTO070G2_2|g4508.t1
ATGGCCGACTCTGCAGGCACCGGCAAGCTCGCCCCAGAGGCACTAATCACCAAATTTCAAGTGAGCAAGCTCCTC
AAACAAGACCAAAATGGCCGACGAATCGCCCTCCTAGGCACAATCGACAACACGCAAGGCATCCTAATAGCCGAG
CGCGCGGCATTCGAAACGGAATCCCTCGCCGTGCTACAAGCCTTCCACGCCGCAATCTCGCGAGTCAACAACCTA
GGCGACAACGACATCTACCGCTGGTATCTCGCGTCATCAAACGCCAACAACACGGCCCCGACCACTCCCGCGGAA
GCCGCGAACCCCCAGCAAGACCTCAAACTCAACCTCATCTGGCCATGCACCGCACAGCACATCAAGAAGTACTCG
GACCAGCATCTGCGCATGGTCACGGAGACGGCGGAGATATACCGTGCGCACGTGCGACCGTTCATGCAGGCGAAG
CGCGAGGAGGGGCGGCTGAACTGGGTGTTTAATATTCTTGAGGGCAGGACTGAGCAGGAGGATGTGGTTCTGCGG
GATGAGGGGCTCGGGCCTGATGATGGGTTTCTGATGTTACCGGATTTGAACTGGGATCGGAAGAGTATCGGGTCA
TTGCATTTGTTGGCTTTGGTGCAGAGGAGGGATATTTGGAGTTTGAGGGATCTGAAGAAGAGTTTTGTGCCTTGG
TTGAAATATTTGAGGGGGAGGGTGCTGGAGGCTACGGTTTCTATGTATCCTGGTTTGGAGGAGGATCAGATTAAG
CTTTACGTTCATTATCAACCGACTTACTACCATTTCCATATTCATGTTGTCAATGTTATGCTCGAAGCTGGTGCA
ACGCAGGCAACGGGCAAGGCGTTTGGGCTGGAGAACTTGATCTCGCAGCTTGAGACTTTGTCTGGGGATGGGGAT
GCTAGTCTGGCCGATGTTGATTTGACATACTTCCTGGGCGAGGCCAATGAGCTGTGGACGGATATTTTTGAGCCG
TTGAAGCAGGGGAAGCAACCTCGTGAATATAAGAGAGCTGCTTGA
Gene >Pro_DTO070G2_2|g4508.t1
ATGGCCGACTCTGCAGGCACCGGCAAGCTCGCCCCAGAGGCACTAATCACCAAATTTCAAGTGAGCAAGCTCCTC
AAACAAGGTCCGACCCATCCACCTCCTACCCCGCAGCCTCAATGAACTAAAAGAAACCCAGACCAAAATGGCCGA
CGAATCGCCCTCCTAGGCACAATCGACAACACGCAAGGCATCCTAATAGCCGAGCGCGCGGCATTCGAAACGGAA
TCCCTCGCCGTGCTACAAGCCTTCCACGCCGCAATCTCGCGAGTCAACAACCTAGGCGACAACGACATCTACCGC
TGGTATCTCGCGTCATCAAACGCCAACAACACGGCCCCGACCACTCCCGCGGAAGCCGCGAACCCCCAGCAAGAC
CTCAAACTCAACCTCATCTGGCCATGCACCGCACAGCACATCAAGAAGTACTCGGACCAGCATCTGCGCATGGTC
ACGGAGACGGCGGAGATATACCGTGCGCACGTGCGACCGTTCATGCAGGCGAAGCGCGAGGAGGGGCGGCTGAAC
TGGGTGTTTAATATTCTTGAGGGCAGGACTGAGCAGGAGGATGTGGTTCTGCGGGATGAGGGGCTCGGGCCTGAT
GATGGGTTTCTGATGTTACCGGATTTGAACTGGGATCGGAAGAGTATCGGGTCATTGCATTTGTTGGCTTTGGTG
CAGAGGAGGGATATTTGGAGTTTGAGGGATCTGAAGAAGAGTTTTGTGCCTTGGTTGAAATATTTGAGGGGGAGG
GTGCTGGAGGCTACGGTTTCTATGTATCCTGGTTTGGAGGAGGATCAGATTAAGCTTTACGTTCATTGTGAGTTG
CATTTCGTTACGTTGGTGGTTTTTTTGCTGACTTTGAATTTTAGATCAACCGACTTACTACCATTTCCATATTCA
TGTTGTCAATGTTATGCTCGAAGCTGGTGCAACGCAGGCAACGGGCAAGGCGTTTGGGCTGGAGAACTTGATCTC
GCAGCTTGAGACTTTGTCTGGGGATGGGGATGCTAGTCTGGCCGATGTTGATTTGACATACTTCCTGGGCGAGGC
CAATGAGCTGTGGACGGATATTTTTGAGCCGTTGAAGCAGGGGAAGCAACCTCGTGAATATAAGAGAGCTGCTTG
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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