© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g4405.t1 |
| Gene name | |
| Location | scaffold_04:1599636..1601007 |
| Strand | - |
| Gene length (bp) | 1371 |
| Transcript length (bp) | 1146 |
| Coding sequence length (bp) | 1146 |
| Protein length (aa) | 382 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00775 | Dioxygenase_C | Dioxygenase | 8.9E-07 | 131 | 233 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008199 | ferric iron binding | Yes |
| GO:0006725 | cellular aromatic compound metabolic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0005506 | iron ion binding | No |
| GO:0005488 | binding | No |
| GO:0043169 | cation binding | No |
| GO:0008152 | metabolic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043167 | ion binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999367 |
| Orthofinder run ID | 2 |
| Orthogroup | 8364 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g4405.t1 MVHLASIVAVGLTALTGIVSAHPGHDVKAEAAERAAFLKEASVHSRSLAQCTSHLQRRGHQSRNVARRHTSVKNI RRRLGLQHTNHFLKARSDDALDTSHHSNLTSVDYSTDPEVLFGAEATCILGPEVTQGPYYVTGELVRKNIAESQE GIPLYLDIQLINTNTCEPIPQLYTDLWHCNSTGVYSGVVASGNGNSNDSTNLDTTFNRGIQKSNRDGVVQFQTTF PGHYTGRATHIHVLAHPANETRVLANGTISGLYTTHSSHVGQIFFDQDLITAADEVAPYSTNTQEVTTNADDSIL GEELDVIDPFMEYIYLGDDISEGIFAWITVGLDPTQDTTVTPAAYYTEDGGVENENAGAGGGSGAPPDDGASSGS SSTTAA* |
| Coding | >Pro_DTO070G2_2|g4405.t1 ATGGTTCATCTCGCTTCCATTGTTGCCGTCGGCCTGACTGCTCTGACCGGCATTGTCTCCGCTCACCCGGGACAT GATGTCAAAGCCGAAGCCGCCGAGCGAGCTGCGTTCTTGAAAGAGGCCTCTGTTCACTCGCGCAGTCTTGCGCAG TGTACCTCTCATCTCCAGCGTCGAGGCCACCAAAGCCGAAACGTGGCCCGTCGTCACACATCCGTGAAGAACATA CGTCGCCGCCTTGGTCTTCAGCATACCAACCACTTCCTCAAGGCGCGCTCCGATGACGCCCTGGATACCTCGCAT CACTCCAATCTCACGAGTGTGGATTATTCGACCGATCCCGAAGTGTTGTTTGGCGCCGAGGCGACATGCATTCTC GGACCGGAGGTGACACAGGGACCCTACTATGTCACCGGTGAGCTCGTTCGTAAGAACATCGCCGAGTCCCAGGAA GGTATTCCTCTCTACCTGGACATCCAGCTGATCAACACCAACACCTGCGAACCCATTCCGCAGCTCTACACGGAC TTGTGGCACTGCAACTCCACTGGTGTCTATTCTGGAGTCGTCGCCAGCGGAAACGGAAACTCCAACGATTCCACC AACCTCGACACGACCTTCAACCGAGGTATCCAGAAGAGTAACAGGGACGGTGTCGTTCAGTTCCAAACAACCTTC CCAGGTCATTACACTGGCCGGGCAACTCACATCCACGTTCTCGCCCACCCAGCCAACGAAACCAGAGTCCTCGCC AACGGCACCATCTCCGGCCTCTACACCACGCATTCATCGCACGTCGGACAGATCTTTTTCGACCAGGATCTCATC ACCGCCGCCGACGAAGTCGCCCCTTACTCAACCAACACACAGGAAGTGACCACCAACGCCGACGACAGCATTCTC GGCGAAGAGCTCGACGTCATTGACCCCTTCATGGAATACATCTATCTGGGCGACGATATCTCCGAGGGAATCTTC GCTTGGATCACTGTTGGTTTGGACCCTACACAGGATACCACTGTTACCCCTGCGGCTTATTATACTGAGGACGGT GGTGTTGAGAATGAGAATGCTGGTGCCGGTGGTGGTAGTGGGGCCCCTCCCGACGACGGTGCTTCCTCTGGCAGT TCCTCGACTACGGCTGCTTAA |
| Transcript | >Pro_DTO070G2_2|g4405.t1 ATGGTTCATCTCGCTTCCATTGTTGCCGTCGGCCTGACTGCTCTGACCGGCATTGTCTCCGCTCACCCGGGACAT GATGTCAAAGCCGAAGCCGCCGAGCGAGCTGCGTTCTTGAAAGAGGCCTCTGTTCACTCGCGCAGTCTTGCGCAG TGTACCTCTCATCTCCAGCGTCGAGGCCACCAAAGCCGAAACGTGGCCCGTCGTCACACATCCGTGAAGAACATA CGTCGCCGCCTTGGTCTTCAGCATACCAACCACTTCCTCAAGGCGCGCTCCGATGACGCCCTGGATACCTCGCAT CACTCCAATCTCACGAGTGTGGATTATTCGACCGATCCCGAAGTGTTGTTTGGCGCCGAGGCGACATGCATTCTC GGACCGGAGGTGACACAGGGACCCTACTATGTCACCGGTGAGCTCGTTCGTAAGAACATCGCCGAGTCCCAGGAA GGTATTCCTCTCTACCTGGACATCCAGCTGATCAACACCAACACCTGCGAACCCATTCCGCAGCTCTACACGGAC TTGTGGCACTGCAACTCCACTGGTGTCTATTCTGGAGTCGTCGCCAGCGGAAACGGAAACTCCAACGATTCCACC AACCTCGACACGACCTTCAACCGAGGTATCCAGAAGAGTAACAGGGACGGTGTCGTTCAGTTCCAAACAACCTTC CCAGGTCATTACACTGGCCGGGCAACTCACATCCACGTTCTCGCCCACCCAGCCAACGAAACCAGAGTCCTCGCC AACGGCACCATCTCCGGCCTCTACACCACGCATTCATCGCACGTCGGACAGATCTTTTTCGACCAGGATCTCATC ACCGCCGCCGACGAAGTCGCCCCTTACTCAACCAACACACAGGAAGTGACCACCAACGCCGACGACAGCATTCTC GGCGAAGAGCTCGACGTCATTGACCCCTTCATGGAATACATCTATCTGGGCGACGATATCTCCGAGGGAATCTTC GCTTGGATCACTGTTGGTTTGGACCCTACACAGGATACCACTGTTACCCCTGCGGCTTATTATACTGAGGACGGT GGTGTTGAGAATGAGAATGCTGGTGCCGGTGGTGGTAGTGGGGCCCCTCCCGACGACGGTGCTTCCTCTGGCAGT TCCTCGACTACGGCTGCTTAA |
| Gene | >Pro_DTO070G2_2|g4405.t1 ATGGTTCATCTCGCTTCCATTGTTGCCGTCGGCCTGACTGCTCTGACCGGCATTGTCTCCGCTCACCCGGGACAT GATGTCAAAGCCGAAGCCGCCGAGCGAGCTGCGTTCTTGAAAGAGGCCTCTGTTCACTCGCGCAGTCTTGCGCAG TGTACCTCTCATCTCCAGCGTCGAGGCCACCAAAGCCGAAACGTGGCCCGTCGTCACACATCCGTGAAGAACATA CGTCGCCGCCTTGGTCTTCAGCATAGTATGTTTTGTGTTTTGAAGTCTTCAACATACTACCACGTTCTAACGACC CATAGCCAACCACTTCCTCAAGGCGCGCTCCGATGACGCCCTGGATACCTCGCATCACTCCAATCTCACGAGTGT GGATTATTCGACCGATCCCGAAGTGTTGTTTGGCGCCGAGGCGACATGCATTCTCGGACCGGAGGTGACACAGGG ACCCTACTGTTAGCTTCCCATCTTTCTTGTGATTGAATCTTACTCACGCTGTTTCGGTTTAGATGTCACCGGTGA GCTCGTTCGTAAGAACATCGCCGAGTCCCAGGAAGGTATTCCTCTCTACCTGGACATCCAGCTGATCAACACCAA CACCTGCGAACCCATTCCGCAGCTCTACACGGACTTGTGGCACTGCAACTCCACTGTAAGTATACTGCATCCCCG ATATCACATACAATACGAACCTTTCACTTACACGATCATCATAGGGTGTCTATTCTGGAGTCGTCGCCAGCGGAA ACGGAAACTCCAACGATTCCACCAACCTCGACACGACCTTCAACCGAGGTATCCAGAAGAGTAACAGGGACGGTG TCGTTCAGTTCCAAACAACCTTCCCAGGTCATTACACTGGCCGGGCAACTCACATCCACGGTATACACAATTCCC CTTAGTTAAGCCAATTCCAATACTAACAAACACATAGTTCTCGCCCACCCAGCCAACGAAACCAGAGTCCTCGCC AACGGCACCATCTCCGGCCTCTACACCACGCATTCATCGCACGTCGGACAGATCTTTTTCGACCAGGATCTCATC ACCGCCGCCGACGAAGTCGCCCCTTACTCAACCAACACACAGGAAGTGACCACCAACGCCGACGACAGCATTCTC GGCGAAGAGCTCGACGTCATTGACCCCTTCATGGAATACATCTATCTGGGCGACGATATCTCCGAGGGAATCTTC GCTTGGATCACTGTTGGTTTGGACCCTACACAGGATACCACTGTTACCCCTGCGGCTTATTATACTGAGGACGGT GGTGTTGAGAATGAGAATGCTGGTGCCGGTGGTGGTAGTGGGGCCCCTCCCGACGACGGTGCTTCCTCTGGCAGT TCCTCGACTACGGCTGCTTAA |