© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g4338.t1 |
| Gene name | |
| Location | scaffold_04:1409641..1411060 |
| Strand | - |
| Gene length (bp) | 1419 |
| Transcript length (bp) | 1371 |
| Coding sequence length (bp) | 1371 |
| Protein length (aa) | 457 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.8E-26 | 54 | 331 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-12 | 253 | 437 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0006810 | transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 26 | 48 | 22 |
| 2 | 69 | 91 | 22 |
| 3 | 101 | 123 | 22 |
| 4 | 130 | 152 | 22 |
| 5 | 156 | 178 | 22 |
| 6 | 191 | 213 | 22 |
| 7 | 248 | 270 | 22 |
| 8 | 308 | 330 | 22 |
| 9 | 345 | 367 | 22 |
| 10 | 380 | 402 | 22 |
| 11 | 417 | 436 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g4338.t1 MERSLTPMLVDGENPANSPTRLHSIIIIIASTTLVFTGCGINFAFGVFQELYDSMSKEPNTPFTGATPAQIDLIG TLSIALMTIGAPFATAWTKQYPPRYVIWASGIIHSSALLFASFSQHLWQFILTQGILLGMATCLTYMPSVTVAPT WFTLHRGLAMGIILAGTGIGGVAWPLAFRYLIESLGFRNTLRVTAGISFALICGSGTFIRWPASQITRIQAENAA SSRSSTFFRLPLVDWRVVQSRKFVAHALGAALQSAAYYTPVFFFASFARTLGYSQATSANFIAISNAANALGKIV IGHAADRMGRLNTLVLTTLISAVSVLALWLPSCLSATQSTGSTLFIAFTIFYGVFASAYVALFPTSLVELFGVQN FVSVNGLLYMVRGLATLVGTPVAGALIRGNHEKSVGPRSYENTSIMVGVLLVVATLAVVWARLEATLTLDSTVGR RMKWLM* |
| Coding | >Pro_DTO070G2_2|g4338.t1 ATGGAACGTTCTTTAACACCCATGCTGGTTGACGGAGAAAACCCGGCAAACTCACCAACTCGTCTACACTCCATC ATCATTATAATCGCCTCGACGACCCTCGTCTTTACAGGATGCGGAATTAACTTCGCATTCGGTGTCTTTCAAGAG CTCTACGACTCCATGTCAAAGGAGCCAAACACCCCGTTCACCGGCGCAACACCGGCGCAGATTGACCTTATCGGT ACTCTCTCAATCGCACTGATGACAATTGGTGCGCCATTCGCAACGGCATGGACAAAGCAATATCCCCCTCGATAT GTCATCTGGGCTAGCGGAATAATTCATTCAAGCGCCTTATTATTTGCAAGCTTCAGTCAACACCTGTGGCAATTC ATCCTCACCCAAGGCATTCTGCTTGGTATGGCCACGTGTCTAACTTACATGCCGTCTGTAACTGTGGCACCGACC TGGTTCACACTGCACCGTGGACTAGCCATGGGCATAATCCTCGCGGGAACTGGGATCGGCGGTGTTGCCTGGCCC CTCGCTTTTCGATACCTCATTGAGTCCCTCGGATTCCGCAATACACTTCGCGTCACGGCGGGGATCTCCTTCGCA CTCATTTGCGGCTCAGGGACCTTTATACGCTGGCCTGCTAGTCAGATCACCCGTATTCAAGCCGAGAACGCCGCT TCTTCCCGGTCTTCTACATTTTTCCGCCTTCCATTAGTGGACTGGCGTGTCGTTCAAAGCCGCAAATTTGTTGCC CATGCTCTGGGTGCGGCATTACAGTCCGCTGCATACTACACGCCAGTCTTCTTTTTCGCTTCTTTTGCCCGTACA CTAGGCTACTCACAGGCAACGTCTGCAAACTTCATTGCCATCTCGAATGCTGCAAATGCGCTAGGCAAGATCGTC ATCGGTCATGCAGCTGACCGTATGGGAAGACTCAACACACTGGTATTAACAACCCTCATCTCAGCAGTGTCTGTC CTCGCATTATGGCTTCCCTCGTGTCTATCCGCCACACAATCTACCGGGAGCACACTGTTCATTGCATTCACGATC TTCTATGGCGTTTTTGCTTCAGCATACGTCGCTCTTTTCCCGACGAGCCTAGTAGAGTTGTTCGGTGTACAGAAC TTTGTCAGTGTCAATGGTTTGCTGTATATGGTGCGAGGATTAGCGACATTAGTTGGAACCCCAGTTGCGGGTGCA CTGATCCGCGGAAACCACGAGAAAAGTGTCGGTCCGCGAAGCTACGAGAATACTAGCATTATGGTCGGTGTATTG CTGGTTGTGGCAACTTTGGCTGTGGTTTGGGCGCGACTCGAGGCTACCCTTACCCTAGATTCCACCGTGGGGCGC CGAATGAAGTGGTTGATGTAA |
| Transcript | >Pro_DTO070G2_2|g4338.t1 ATGGAACGTTCTTTAACACCCATGCTGGTTGACGGAGAAAACCCGGCAAACTCACCAACTCGTCTACACTCCATC ATCATTATAATCGCCTCGACGACCCTCGTCTTTACAGGATGCGGAATTAACTTCGCATTCGGTGTCTTTCAAGAG CTCTACGACTCCATGTCAAAGGAGCCAAACACCCCGTTCACCGGCGCAACACCGGCGCAGATTGACCTTATCGGT ACTCTCTCAATCGCACTGATGACAATTGGTGCGCCATTCGCAACGGCATGGACAAAGCAATATCCCCCTCGATAT GTCATCTGGGCTAGCGGAATAATTCATTCAAGCGCCTTATTATTTGCAAGCTTCAGTCAACACCTGTGGCAATTC ATCCTCACCCAAGGCATTCTGCTTGGTATGGCCACGTGTCTAACTTACATGCCGTCTGTAACTGTGGCACCGACC TGGTTCACACTGCACCGTGGACTAGCCATGGGCATAATCCTCGCGGGAACTGGGATCGGCGGTGTTGCCTGGCCC CTCGCTTTTCGATACCTCATTGAGTCCCTCGGATTCCGCAATACACTTCGCGTCACGGCGGGGATCTCCTTCGCA CTCATTTGCGGCTCAGGGACCTTTATACGCTGGCCTGCTAGTCAGATCACCCGTATTCAAGCCGAGAACGCCGCT TCTTCCCGGTCTTCTACATTTTTCCGCCTTCCATTAGTGGACTGGCGTGTCGTTCAAAGCCGCAAATTTGTTGCC CATGCTCTGGGTGCGGCATTACAGTCCGCTGCATACTACACGCCAGTCTTCTTTTTCGCTTCTTTTGCCCGTACA CTAGGCTACTCACAGGCAACGTCTGCAAACTTCATTGCCATCTCGAATGCTGCAAATGCGCTAGGCAAGATCGTC ATCGGTCATGCAGCTGACCGTATGGGAAGACTCAACACACTGGTATTAACAACCCTCATCTCAGCAGTGTCTGTC CTCGCATTATGGCTTCCCTCGTGTCTATCCGCCACACAATCTACCGGGAGCACACTGTTCATTGCATTCACGATC TTCTATGGCGTTTTTGCTTCAGCATACGTCGCTCTTTTCCCGACGAGCCTAGTAGAGTTGTTCGGTGTACAGAAC TTTGTCAGTGTCAATGGTTTGCTGTATATGGTGCGAGGATTAGCGACATTAGTTGGAACCCCAGTTGCGGGTGCA CTGATCCGCGGAAACCACGAGAAAAGTGTCGGTCCGCGAAGCTACGAGAATACTAGCATTATGGTCGGTGTATTG CTGGTTGTGGCAACTTTGGCTGTGGTTTGGGCGCGACTCGAGGCTACCCTTACCCTAGATTCCACCGTGGGGCGC CGAATGAAGTGGTTGATGTAA |
| Gene | >Pro_DTO070G2_2|g4338.t1 ATGGAACGTTCTTTAACACCCATGCTGGTTGACGGAGAAAACCCGGCAAACTCACCAACTCGTCTGTACGTACCG CAGCCACCTCCATAAGAGGTGGACTAACACAGCTACAGACACTCCATCATCATTATAATCGCCTCGACGACCCTC GTCTTTACAGGATGCGGAATTAACTTCGCATTCGGTGTCTTTCAAGAGCTCTACGACTCCATGTCAAAGGAGCCA AACACCCCGTTCACCGGCGCAACACCGGCGCAGATTGACCTTATCGGTACTCTCTCAATCGCACTGATGACAATT GGTGCGCCATTCGCAACGGCATGGACAAAGCAATATCCCCCTCGATATGTCATCTGGGCTAGCGGAATAATTCAT TCAAGCGCCTTATTATTTGCAAGCTTCAGTCAACACCTGTGGCAATTCATCCTCACCCAAGGCATTCTGCTTGGT ATGGCCACGTGTCTAACTTACATGCCGTCTGTAACTGTGGCACCGACCTGGTTCACACTGCACCGTGGACTAGCC ATGGGCATAATCCTCGCGGGAACTGGGATCGGCGGTGTTGCCTGGCCCCTCGCTTTTCGATACCTCATTGAGTCC CTCGGATTCCGCAATACACTTCGCGTCACGGCGGGGATCTCCTTCGCACTCATTTGCGGCTCAGGGACCTTTATA CGCTGGCCTGCTAGTCAGATCACCCGTATTCAAGCCGAGAACGCCGCTTCTTCCCGGTCTTCTACATTTTTCCGC CTTCCATTAGTGGACTGGCGTGTCGTTCAAAGCCGCAAATTTGTTGCCCATGCTCTGGGTGCGGCATTACAGTCC GCTGCATACTACACGCCAGTCTTCTTTTTCGCTTCTTTTGCCCGTACACTAGGCTACTCACAGGCAACGTCTGCA AACTTCATTGCCATCTCGAATGCTGCAAATGCGCTAGGCAAGATCGTCATCGGTCATGCAGCTGACCGTATGGGA AGACTCAACACACTGGTATTAACAACCCTCATCTCAGCAGTGTCTGTCCTCGCATTATGGCTTCCCTCGTGTCTA TCCGCCACACAATCTACCGGGAGCACACTGTTCATTGCATTCACGATCTTCTATGGCGTTTTTGCTTCAGCATAC GTCGCTCTTTTCCCGACGAGCCTAGTAGAGTTGTTCGGTGTACAGAACTTTGTCAGTGTCAATGGTTTGCTGTAT ATGGTGCGAGGATTAGCGACATTAGTTGGAACCCCAGTTGCGGGTGCACTGATCCGCGGAAACCACGAGAAAAGT GTCGGTCCGCGAAGCTACGAGAATACTAGCATTATGGTCGGTGTATTGCTGGTTGTGGCAACTTTGGCTGTGGTT TGGGCGCGACTCGAGGCTACCCTTACCCTAGATTCCACCGTGGGGCGCCGAATGAAGTGGTTGATGTAA |