Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g42.t1
Gene name
Locationscaffold_01:122799..124618
Strand+
Gene length (bp)1819
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00642 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2.5E-06 60 83
PF00642 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) 6.1E-05 90 111
PF18044 zf-CCCH_4 CCCH-type zinc finger 3.9E-06 92 111
PF14608 zf-CCCH_2 RNA-binding, Nab2-type zinc finger 6.1E-03 63 82
PF14608 zf-CCCH_2 RNA-binding, Nab2-type zinc finger 7.0E-04 92 111

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0005488 binding No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup4804
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g5404.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g7348.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g6556.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g2324.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g3939.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g3937.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g8150.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g7250.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g5561.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g4230.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g6609.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g3437.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g5292.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g7990.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g9448.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g8720.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g5377.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g2697.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g42.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g93.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g7852.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g8842.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g3859.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g9138.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g8793.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g7750.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g6382.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g277.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g1698.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g8057.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g4570.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g5996.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g2505.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g6887.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g42.t1
MQVSSRAPPSRRANHSEMRGRAPLPATSGAPQNPQNGHSRNPSALDVARSPPNQSNKNTKHVPCKFFRQGACQAG
PACPFLHSTDAGIDYAPCKYFAKGNCKFGAKCALAHILPDGRRVNRPTGNMGIGSGHLNLGGRVNPQAYVNQDSA
LTNSVLSQQRMNGHEQPRYAQLAPQEEYESLHGQQQPSYDGIPTIDTGLASDAGSKYGSPAEDVRYLMSPNNNHL
SALDAGLPASFDSQGISHAARYGPVAASMPSQFGLESPPPQRPAHADIFRNLGDLGYGTSLRKPSSNIGSSPPAP
EDTVGTRFMHSSRPVRPRMFSASVPRPTALEEWDENFPMEEDYLPFNLHDDVLTPQEKLRRLSRTDNDLSSSHRD
LTGLGMTSTSFSKNGSPLASSPSRFGALFAKQRQRKEEESHGSSSFHIGSPLRESSLNPITSPSLGPIGSSRVSH
EASFISSPGRQSSMSIISEQLSGMGLHPGSARPSPAIPSSLSNPTPIGPTPIGRFDRIISPPVNTGKIEEEEQSD
LVFDMEEEVGHKRTSASWTENKESSS*
Coding >Pro_DTO070G2_2|g42.t1
ATGCAGGTGTCTTCTCGTGCTCCGCCATCTCGTCGAGCCAATCATTCAGAGATGAGAGGTCGTGCGCCTCTTCCG
GCTACCTCTGGGGCACCCCAGAACCCCCAGAACGGACATTCTCGCAATCCATCGGCACTTGACGTTGCCCGCAGC
CCGCCGAACCAGAGCAATAAGAACACCAAACATGTTCCTTGCAAATTTTTCCGCCAGGGTGCCTGCCAGGCAGGT
CCCGCCTGTCCGTTTTTACACTCCACCGATGCCGGCATTGATTACGCTCCGTGCAAGTATTTTGCAAAGGGAAAC
TGCAAATTCGGCGCAAAATGCGCACTGGCGCATATCCTACCAGATGGACGGAGAGTCAACCGGCCGACTGGGAAC
ATGGGAATAGGAAGCGGTCATCTCAATCTGGGCGGCCGGGTGAATCCGCAGGCCTATGTCAACCAGGACTCCGCC
TTGACCAACTCGGTGCTCTCCCAACAGCGCATGAACGGTCACGAGCAGCCTCGATATGCTCAGCTGGCCCCACAG
GAGGAGTATGAATCCCTGCATGGGCAGCAACAGCCGTCCTATGATGGAATCCCCACGATCGATACGGGCCTGGCA
TCCGATGCCGGCTCCAAGTATGGATCTCCCGCTGAAGATGTCCGATACCTCATGTCGCCTAATAACAACCACCTC
AGCGCCCTCGATGCAGGGCTCCCGGCTTCCTTCGACAGTCAAGGTATCTCTCATGCTGCCCGTTACGGTCCGGTG
GCTGCTTCCATGCCCTCGCAATTTGGATTGGAATCGCCACCACCCCAGAGACCGGCTCATGCAGATATATTCCGG
AACCTGGGCGATCTCGGCTATGGCACCAGTTTGCGCAAGCCTTCATCGAACATAGGATCTTCTCCTCCCGCCCCT
GAAGATACAGTCGGTACCCGGTTCATGCACTCGTCGCGCCCCGTCAGGCCACGCATGTTTTCCGCTAGTGTTCCT
CGTCCCACGGCCCTTGAGGAATGGGATGAGAACTTCCCCATGGAAGAGGATTACCTACCATTCAATCTGCACGAC
GATGTTCTGACTCCACAGGAAAAGCTGCGCCGCCTCTCCCGGACCGATAACGACCTCAGCTCCAGCCACCGCGAC
CTCACTGGCCTTGGCATGACCAGCACCAGCTTTTCCAAGAATGGTTCTCCCCTGGCGTCGAGCCCGTCTCGCTTT
GGTGCATTGTTTGCTAAGCAGCGCCAGCGCAAGGAAGAGGAATCTCACGGCTCTTCCTCTTTCCACATCGGCTCT
CCTCTCCGTGAGTCATCACTGAACCCAATCACCAGCCCTAGCCTGGGACCCATTGGTAGTAGCCGGGTATCCCAC
GAAGCGTCGTTCATCTCGAGCCCTGGACGTCAATCCTCAATGTCCATTATCTCCGAGCAGCTCAGCGGCATGGGC
CTTCACCCTGGTTCTGCTCGTCCGTCGCCTGCCATTCCTAGCAGTCTCAGCAATCCTACCCCTATCGGTCCTACT
CCTATCGGCCGATTTGACCGAATCATCTCCCCTCCTGTCAACACAGGCAAGATTGAGGAGGAAGAGCAGAGTGAC
CTGGTCTTCGACATGGAGGAAGAGGTCGGCCACAAGCGGACCAGTGCCTCGTGGACTGAGAACAAAGAAAGTTCC
TCCTAA
Transcript >Pro_DTO070G2_2|g42.t1
ATGCAGGTGTCTTCTCGTGCTCCGCCATCTCGTCGAGCCAATCATTCAGAGATGAGAGGTCGTGCGCCTCTTCCG
GCTACCTCTGGGGCACCCCAGAACCCCCAGAACGGACATTCTCGCAATCCATCGGCACTTGACGTTGCCCGCAGC
CCGCCGAACCAGAGCAATAAGAACACCAAACATGTTCCTTGCAAATTTTTCCGCCAGGGTGCCTGCCAGGCAGGT
CCCGCCTGTCCGTTTTTACACTCCACCGATGCCGGCATTGATTACGCTCCGTGCAAGTATTTTGCAAAGGGAAAC
TGCAAATTCGGCGCAAAATGCGCACTGGCGCATATCCTACCAGATGGACGGAGAGTCAACCGGCCGACTGGGAAC
ATGGGAATAGGAAGCGGTCATCTCAATCTGGGCGGCCGGGTGAATCCGCAGGCCTATGTCAACCAGGACTCCGCC
TTGACCAACTCGGTGCTCTCCCAACAGCGCATGAACGGTCACGAGCAGCCTCGATATGCTCAGCTGGCCCCACAG
GAGGAGTATGAATCCCTGCATGGGCAGCAACAGCCGTCCTATGATGGAATCCCCACGATCGATACGGGCCTGGCA
TCCGATGCCGGCTCCAAGTATGGATCTCCCGCTGAAGATGTCCGATACCTCATGTCGCCTAATAACAACCACCTC
AGCGCCCTCGATGCAGGGCTCCCGGCTTCCTTCGACAGTCAAGGTATCTCTCATGCTGCCCGTTACGGTCCGGTG
GCTGCTTCCATGCCCTCGCAATTTGGATTGGAATCGCCACCACCCCAGAGACCGGCTCATGCAGATATATTCCGG
AACCTGGGCGATCTCGGCTATGGCACCAGTTTGCGCAAGCCTTCATCGAACATAGGATCTTCTCCTCCCGCCCCT
GAAGATACAGTCGGTACCCGGTTCATGCACTCGTCGCGCCCCGTCAGGCCACGCATGTTTTCCGCTAGTGTTCCT
CGTCCCACGGCCCTTGAGGAATGGGATGAGAACTTCCCCATGGAAGAGGATTACCTACCATTCAATCTGCACGAC
GATGTTCTGACTCCACAGGAAAAGCTGCGCCGCCTCTCCCGGACCGATAACGACCTCAGCTCCAGCCACCGCGAC
CTCACTGGCCTTGGCATGACCAGCACCAGCTTTTCCAAGAATGGTTCTCCCCTGGCGTCGAGCCCGTCTCGCTTT
GGTGCATTGTTTGCTAAGCAGCGCCAGCGCAAGGAAGAGGAATCTCACGGCTCTTCCTCTTTCCACATCGGCTCT
CCTCTCCGTGAGTCATCACTGAACCCAATCACCAGCCCTAGCCTGGGACCCATTGGTAGTAGCCGGGTATCCCAC
GAAGCGTCGTTCATCTCGAGCCCTGGACGTCAATCCTCAATGTCCATTATCTCCGAGCAGCTCAGCGGCATGGGC
CTTCACCCTGGTTCTGCTCGTCCGTCGCCTGCCATTCCTAGCAGTCTCAGCAATCCTACCCCTATCGGTCCTACT
CCTATCGGCCGATTTGACCGAATCATCTCCCCTCCTGTCAACACAGGCAAGATTGAGGAGGAAGAGCAGAGTGAC
CTGGTCTTCGACATGGAGGAAGAGGTCGGCCACAAGCGGACCAGTGCCTCGTGGACTGAGAACAAAGAAAGTTCC
TCCTAA
Gene >Pro_DTO070G2_2|g42.t1
ATGCAGGTGTCTTCTCGTGCTCCGCCATCTCGTCGAGCCAATCATTCAGAGATGAGAGGTCGTGCGCCTCTTCCG
GCTACCTCTGGGGCACCCCAGAACCCCCAGAACGGACATTCTCGCAATCCATCGGCACTTGACGTTGCCCGCAGC
CCGCCGAACCAGAGCAATAAGAGTAAGTCTTGACTTGATTCATTCATATTATTGTAGCGACGCCCGAATGCGAAA
CTAACCCTCTGCTATCATATATACAGACACCAAACATGTTCCTTGCAAATTTTTCCGCCAGGGTGCCTGCCAGGC
AGGTCCCGCCTGTCCGTTTTTACACTCCACCGATGCCGGCATTGATTACGCTCCGTGCAAGTATTTTGCAAAGGT
ATGAAATCGGAACTGTTTCGAAGTCCTCCTCTCATGGCGTGTTATCCGAGGCCATCGGAAGCTAACGGGGCAATG
ATTTTAGGGAAACTGCAAATTCGGCGCAAAATGCGCACTGGCGCATATCCTACCAGATGGACGGAGAGTCAACCG
GCCGACTGGGAACATGGGAATAGGAAGCGGTCATCTCAATCTGGGCGGCCGGGTGAATCCGCAGGCCTATGTCAA
CCAGGACTCCGCCTTGACCAACTCGGTGCTCTCCCAACAGCGCATGAACGGTCACGAGCAGCCTCGATATGCTCA
GCTGGCCCCACAGGAGGAGTATGAATCCCTGCATGGGCAGCAACAGCCGTCCTATGATGGAATCCCCACGATCGA
TACGGGCCTGGCATCCGATGCCGGCTCCAAGTATGGATCTCCCGCTGAAGATGTCCGATACCTCATGTCGCCTAA
TAACAACCACCTCAGCGCCCTCGATGCAGGGCTCCCGGCTTCCTTCGACAGTCAAGGTATCTCTCATGCTGCCCG
TTACGGTCCGGTGGCTGCTTCCATGCCCTCGCAATTTGGATTGGAATCGCCACCACCCCAGAGACCGGCTCATGC
AGATATATTCCGGAACCTGGGCGATCTCGGCTATGGCACCAGTTTGCGCAAGCCTTCATCGAACATAGGATCTTC
TCCTCCCGCCCCTGAAGATACAGTCGGTACCCGGTTCATGCACTCGTCGCGCCCCGTCAGGCCACGCATGTTTTC
CGCTAGTGTTCCTCGTCCCACGGCCCTTGAGGAATGGGATGAGAACTTCCCCATGGAAGAGGATTACCTACCATT
CAATCTGCACGACGATGTTCTGACTCCACAGGAAAAGCTGCGCCGCCTCTCCCGGACCGATAACGACCTCAGCTC
CAGCCACCGCGACCTCACTGGCCTTGGCATGACCAGCACCAGCTTTTCCAAGAATGGTTCTCCCCTGGCGTCGAG
CCCGTCTCGCTTTGGTGCATTGTTTGCTAAGCAGCGCCAGCGCAAGGAAGAGGAATCTCACGGCTCTTCCTCTTT
CCACATCGGCTCTCCTCTCCGTGAGTCATCACTGAACCCAATCACCAGCCCTAGCCTGGGACCCATTGGTAGTAG
CCGGGTATCCCACGAAGCGTCGTTCATCTCGAGCCCTGGACGTCAATCCTCAATGTCCATTATCTCCGAGCAGCT
CAGCGGCATGGGCCTTCACCCTGGTTCTGCTCGTCCGTCGCCTGCCATTCCTAGCAGTCTCAGCAATCCTACCCC
TATCGGTCCTACTCCTATCGGCCGATTTGACCGAATCATCTCCCCTCCTGTCAACACAGGCAAGATTGAGGAGGA
AGAGCAGAGTGACCTGGTCTTCGACATGGAGGAAGAGGTCGGCCACAAGCGGACCAGTGCCTCGTGGACTGAGAA
CAAAGAAAGTTCCTCCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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