Protein ID | Pro_DTO070G2_2|g4127.t1 |
Gene name | |
Location | scaffold_04:872183..873962 |
Strand | - |
Gene length (bp) | 1779 |
Transcript length (bp) | 1605 |
Coding sequence length (bp) | 1605 |
Protein length (aa) | 535 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00046 | Homeodomain | Homeodomain | 2.8E-16 | 194 | 250 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003677 | DNA binding | Yes |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0003676 | nucleic acid binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
Transcription Factor Class (based on PFAM domains) |
---|
Homeodomain |
Orthofinder run ID | 2 |
Orthogroup | 8240 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g4127.t1 MSVGGPCLWLPSLSSPVHSPLSAVSSHLSARNSERLSLGPRTISPRLSAQKKEEPAVPVPVHVPARPVEMQPTGY KAENALNNPAAQPVSMGSAPYLERDVSQDTVNHRLEAAKQDMLPRVKLEIPSLNQRGFLAVQPLVGHGGHPEEMG ISSFSGSHDQRDDHDRESTISPDDDKDMMGSDDNRSPSMEKKKMKRFRLTHNQTRFLMSEFTRQAHPDAAHRERL SREIPGLTPRQVQVWFQNRRAKLKRLTTNDRERMLKSRALPDDFDTTKVLRTPFEGKQSGITPVASPQGYGVPNP DFGALRTLRTDCYARPNEDDYLVSPLSSASTAGTYMSSTGRNDSMSQSNMMFRPAASSSMSDLHRTIRNDYPVTR SSSLSDASAHPSPYAGYPMHNRFAGPQPNQPALPYMRRPIEYAMPRHPGMGPYDQHQPFEGSVSPTDTQGSHLTY DINNLGPQQQGYNLGMGSQLPPQGRPIATMQNLPVSAAQNYRPYSYDATAGPMGTPIPYTQANTSTLSLPTSEPS YNYPNYIQQ* |
Coding | >Pro_DTO070G2_2|g4127.t1 ATGTCAGTCGGTGGCCCTTGTCTTTGGTTGCCTTCTTTATCTTCGCCAGTTCATTCGCCCCTTTCTGCGGTTTCA TCTCATCTATCAGCCCGCAATAGCGAGAGACTCTCTTTAGGGCCTAGGACTATCTCACCACGGCTATCTGCGCAG AAGAAAGAGGAGCCTGCCGTTCCTGTTCCTGTGCACGTTCCCGCTCGTCCTGTGGAGATGCAGCCGACTGGTTAT AAGGCTGAAAACGCCTTGAATAACCCGGCGGCACAGCCCGTCAGCATGGGCTCAGCGCCGTACTTGGAGAGAGAT GTTTCACAGGATACGGTCAACCACCGCTTGGAGGCGGCGAAACAGGATATGCTTCCGCGTGTTAAATTGGAGATC CCAAGTTTGAATCAGCGGGGCTTTTTGGCTGTTCAGCCCCTGGTCGGGCACGGCGGTCATCCCGAGGAAATGGGT ATTTCATCGTTTTCGGGCTCGCATGACCAGAGAGACGACCACGACAGAGAATCGACAATCAGTCCTGATGACGAT AAGGATATGATGGGTAGCGATGACAATAGATCGCCTTCGATGGAGAAGAAGAAGATGAAGCGTTTTCGATTAACA CATAACCAAACCCGATTTCTGATGAGTGAGTTCACTCGCCAGGCACATCCCGATGCAGCCCATCGAGAACGTCTG TCGAGGGAAATCCCTGGGTTGACCCCGCGTCAAGTGCAAGTCTGGTTCCAAAATAGGCGAGCAAAGCTCAAGCGT CTCACTACGAATGATCGGGAGAGAATGCTCAAATCTCGAGCCCTTCCTGACGATTTCGATACCACAAAAGTTCTC CGCACGCCCTTTGAGGGCAAACAATCAGGTATCACGCCAGTGGCATCTCCACAAGGCTATGGCGTTCCGAATCCG GATTTCGGGGCTTTGAGAACACTGCGTACCGATTGCTACGCTCGACCAAATGAAGACGACTATCTCGTCTCACCT CTCAGCTCTGCATCGACAGCAGGAACCTACATGTCCTCGACTGGACGAAACGACAGCATGTCTCAGTCGAACATG ATGTTCCGTCCTGCTGCGTCTTCCTCCATGTCCGATTTACATAGAACCATCCGCAACGATTACCCGGTCACCAGA TCAAGTAGCTTGTCCGATGCATCGGCCCATCCATCGCCGTATGCGGGGTATCCTATGCACAATCGCTTCGCGGGG CCACAGCCAAATCAGCCAGCTCTACCCTATATGAGACGACCCATAGAATATGCCATGCCTCGTCATCCAGGCATG GGACCTTATGATCAACATCAACCGTTTGAGGGCTCGGTGTCACCGACAGACACTCAAGGCTCACATCTTACTTAT GACATAAACAATCTAGGCCCGCAACAACAGGGCTACAATCTTGGAATGGGCTCTCAATTACCACCCCAAGGCCGA CCTATAGCCACCATGCAGAACCTGCCAGTCTCGGCAGCACAAAATTATCGGCCCTATTCCTACGACGCCACCGCA GGCCCAATGGGTACACCAATTCCTTACACACAAGCAAATACCTCGACTCTGAGTCTCCCAACTTCCGAGCCATCA TACAACTACCCCAACTATATCCAGCAGTGA |
Transcript | >Pro_DTO070G2_2|g4127.t1 ATGTCAGTCGGTGGCCCTTGTCTTTGGTTGCCTTCTTTATCTTCGCCAGTTCATTCGCCCCTTTCTGCGGTTTCA TCTCATCTATCAGCCCGCAATAGCGAGAGACTCTCTTTAGGGCCTAGGACTATCTCACCACGGCTATCTGCGCAG AAGAAAGAGGAGCCTGCCGTTCCTGTTCCTGTGCACGTTCCCGCTCGTCCTGTGGAGATGCAGCCGACTGGTTAT AAGGCTGAAAACGCCTTGAATAACCCGGCGGCACAGCCCGTCAGCATGGGCTCAGCGCCGTACTTGGAGAGAGAT GTTTCACAGGATACGGTCAACCACCGCTTGGAGGCGGCGAAACAGGATATGCTTCCGCGTGTTAAATTGGAGATC CCAAGTTTGAATCAGCGGGGCTTTTTGGCTGTTCAGCCCCTGGTCGGGCACGGCGGTCATCCCGAGGAAATGGGT ATTTCATCGTTTTCGGGCTCGCATGACCAGAGAGACGACCACGACAGAGAATCGACAATCAGTCCTGATGACGAT AAGGATATGATGGGTAGCGATGACAATAGATCGCCTTCGATGGAGAAGAAGAAGATGAAGCGTTTTCGATTAACA CATAACCAAACCCGATTTCTGATGAGTGAGTTCACTCGCCAGGCACATCCCGATGCAGCCCATCGAGAACGTCTG TCGAGGGAAATCCCTGGGTTGACCCCGCGTCAAGTGCAAGTCTGGTTCCAAAATAGGCGAGCAAAGCTCAAGCGT CTCACTACGAATGATCGGGAGAGAATGCTCAAATCTCGAGCCCTTCCTGACGATTTCGATACCACAAAAGTTCTC CGCACGCCCTTTGAGGGCAAACAATCAGGTATCACGCCAGTGGCATCTCCACAAGGCTATGGCGTTCCGAATCCG GATTTCGGGGCTTTGAGAACACTGCGTACCGATTGCTACGCTCGACCAAATGAAGACGACTATCTCGTCTCACCT CTCAGCTCTGCATCGACAGCAGGAACCTACATGTCCTCGACTGGACGAAACGACAGCATGTCTCAGTCGAACATG ATGTTCCGTCCTGCTGCGTCTTCCTCCATGTCCGATTTACATAGAACCATCCGCAACGATTACCCGGTCACCAGA TCAAGTAGCTTGTCCGATGCATCGGCCCATCCATCGCCGTATGCGGGGTATCCTATGCACAATCGCTTCGCGGGG CCACAGCCAAATCAGCCAGCTCTACCCTATATGAGACGACCCATAGAATATGCCATGCCTCGTCATCCAGGCATG GGACCTTATGATCAACATCAACCGTTTGAGGGCTCGGTGTCACCGACAGACACTCAAGGCTCACATCTTACTTAT GACATAAACAATCTAGGCCCGCAACAACAGGGCTACAATCTTGGAATGGGCTCTCAATTACCACCCCAAGGCCGA CCTATAGCCACCATGCAGAACCTGCCAGTCTCGGCAGCACAAAATTATCGGCCCTATTCCTACGACGCCACCGCA GGCCCAATGGGTACACCAATTCCTTACACACAAGCAAATACCTCGACTCTGAGTCTCCCAACTTCCGAGCCATCA TACAACTACCCCAACTATATCCAGCAGTGA |
Gene | >Pro_DTO070G2_2|g4127.t1 ATGTCAGTCGGTGGCCCTTGTCTTTGGTTGCCTTCTTTATCTTCGCCAGTTCATTCGCCCCTTTCTGCGGTTTCA TCTCATCTATCAGCCCGCAATAGCGAGAGACTCTCTTTAGGGCCTAGGACTATCTCACCACGGCTATCTGCGCAG AAGAAAGAGGAGCCTGCCGTTCCTGTTCCTGTGCACGTTCCCGCTCGTCCTGTGGAGATGCAGCCGACTGGTTAT AAGGCTGAAAACGCCTTGAATAACCCGGCGGCACAGCCCGTCAGCATGGGCTCAGCGCCGTACTTGGAGAGAGAT GTTTCACAGGATACGGTCAACCACCGCTTGGAGGCGGCGAAACAGGATATGCTTCCGCGTGTTAAATTGGAGATC CCAAGTTTGAATCAGCGGGGCTTTTTGGCTGTTCAGCCCCTGGTCGGGCACGGCGGTCATCCCGAGGAAATGGGT ATTTCATCGTTTTCGGGCTCGCATGACCAGAGAGACGACCACGACAGAGAATCGACAATCAGTCCTGATGACGAT AAGGATATGATGGGTAGCGATGACAATAGATCGCCTTCGATGGAGAAGAAGAAGATGAAGCGTTTTCGGTATGGA ATTTCTTATCTTCCAAGTACCACGCATGGTTGCTGACAGAACTATAGATTAACACATAACCAAACCCGATTTCTG ATGAGTGAGTTCACTCGCCAGGCACATCCCGATGCAGCCCATCGAGAACGTCTGTCGAGGGAAATCCCTGGGTTG ACCCCGCGTCAAGTGCAAGTCTGGTTCCAAAATAGGTAGGGTGATCAACTAGTCGAATCGTCTGTCCTTGACTAA CGTAGGTGTACTGTCAGGCGAGCAAAGCTCAAGCGTCTCACTACGAATGATCGGGAGAGAATGCTCAAATCTCGA GCCCTTCCTGACGATTTCGATACCACAAAAGTTCTCCGCACGCCCTTTGAGGGCAAACAATCAGGTATCACGCCA GTGGCATCTCCACAAGGCTATGGCGTTCCGAATCCGGATTTCGGGGCTTTGAGAACACTGCGTACCGATTGCTAC GCTCGACCAAATGAAGACGACTATCTCGTCTCACCTCTCAGCTCTGCATCGACAGCAGGAACCTACATGTCCTCG ACTGGACGAAACGACAGCATGTCTCAGTCGAACATGATGTTCCGTCCTGCTGCGTCTTCCTCCATGTCCGATTTA CATAGAACCATCCGCAACGATTACCCGGTCACCAGATCAAGTAGCTTGTCCGATGCATCGGCCCATCCATCGCCG TATGCGGGGTATCCTATGCACAATCGCTTCGCGGGGCCACAGCCAAATCAGCCAGCTCTACCCTATATGAGACGA CCCATAGAATATGCCATGCCTCGTCATCCAGGCATGGGACCTTATGATCAACATCAACCGTTTGAGGGCTCGGTG TCACCGACAGACACTCAAGGCTCACATCTTACTTATGACATAAACAATCTAGGTTAGTATCTTTTTCCTTGCCTC GACATTCTCCAACCCGATTTCCTAACATGGTTTTATACAGGCCCGCAACAACAGGGCTACAATCTTGGAATGGGC TCTCAATTACCACCCCAAGGCCGACCTATAGCCACCATGCAGAACCTGCCAGTCTCGGCAGCACAAAATTATCGG CCCTATTCCTACGACGCCACCGCAGGCCCAATGGGTACACCAATTCCTTACACACAAGCAAATACCTCGACTCTG AGTCTCCCAACTTCCGAGCCATCATACAACTACCCCAACTATATCCAGCAGTGA |