Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g4002.t1
Gene name
Locationscaffold_04:516090..518100
Strand-
Gene length (bp)2010
Transcript length (bp)1809
Coding sequence length (bp)1809
Protein length (aa) 603

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00579 tRNA-synt_1b tRNA synthetases class I (W and Y) 5.3E-71 118 438
PF16714 TyrRSs_C Tyrosyl-tRNA synthetase C-terminal domain 2.9E-46 481 598

GO

GO Term Description Terminal node
GO:0004812 aminoacyl-tRNA ligase activity Yes
GO:0005524 ATP binding Yes
GO:0000166 nucleotide binding Yes
GO:0003723 RNA binding Yes
GO:0006418 tRNA aminoacylation for protein translation Yes
GO:0009987 cellular process No
GO:0043436 oxoacid metabolic process No
GO:0032553 ribonucleotide binding No
GO:0006520 cellular amino acid metabolic process No
GO:0043168 anion binding No
GO:0017076 purine nucleotide binding No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0016874 ligase activity No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0008152 metabolic process No
GO:0043039 tRNA aminoacylation No
GO:0097367 carbohydrate derivative binding No
GO:0046483 heterocycle metabolic process No
GO:0032559 adenyl ribonucleotide binding No
GO:0090304 nucleic acid metabolic process No
GO:0006399 tRNA metabolic process No
GO:0019752 carboxylic acid metabolic process No
GO:0016875 ligase activity, forming carbon-oxygen bonds No
GO:1901265 nucleoside phosphate binding No
GO:0006082 organic acid metabolic process No
GO:0044238 primary metabolic process No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0005488 binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0140098 catalytic activity, acting on RNA No
GO:0003824 catalytic activity No
GO:0044237 cellular metabolic process No
GO:0044281 small molecule metabolic process No
GO:0003676 nucleic acid binding No
GO:0071704 organic substance metabolic process No
GO:0034660 ncRNA metabolic process No
GO:0016070 RNA metabolic process No
GO:0032555 purine ribonucleotide binding No
GO:0043038 amino acid activation No
GO:0036094 small molecule binding No
GO:1901564 organonitrogen compound metabolic process No
GO:0043167 ion binding No
GO:0030554 adenyl nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0003674 molecular_function No
GO:0043170 macromolecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0008150 biological_process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup6292
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g6911.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g6216.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g6731.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g3195.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g5414.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g9736.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g6740.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g6806.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g7598.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8239.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g6444.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g4636.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g9154.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g9494.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g748.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g9268.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g7641.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g4697.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g4002.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g7838.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g3428.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g5885.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g6476.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g5164.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g6581.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g6327.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g4531.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g8424.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9305.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g3450.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g4989.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g5918.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g6091.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g6335.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g4002.t1
MRLQSASLGPAPYRSLLTPRRIPCGARSFAATTAILPRGDSNRPVLSTLQSGTCFQQQRWITQKYIQRMKDGEQE
WAGFAEEIKAGKRKNFAQHLEERGLIHDVVGERDLLHKVFTEKRVGIYVGVDPTAPSMHVGHMLPFMVLAWGYVW
GLPVTFLLGGATSRVGDPSGRLKGRDAVHSSIRKANMASMHMQLKKLGSSIEHYGRRHGHEKNPMWKRALTNNNT
WWNSMPFLEVLRDLGAFMRLGPMLGRDTVKTRLNQGDGMSFAEFSYPILQAWDWWTLFQQGTQIQVGGADQYGNI
LFGMEAVKSISRNTADEQLRNPLESELDRPIGFTTPLLTTPSGEKLGKSAGNAVWLDKDLTSTFELYQYFVRTPD
DVVEQYLKMFTFVPLPEIATIMEEQNKDPSQRVAQHKLAHEFVELIHGKVEADAVALQHRQLFRPRSSTAEPTPL
PKSSSPQSGHPQSPTAGFSTPQSGNPYAPQTNWANMGDFKVTLPESLVFNQPFNKILWSAGLVSSKSEGHRVIVN
NGAKVGSRPGDSGPMSDQLSFTPIRPWDAEKTKEFVLNGNLLMLKLGKWKLKAVHIVPDEEYRAQGLTAPGWETE
SE*
Coding >Pro_DTO070G2_2|g4002.t1
ATGCGACTACAGTCGGCATCGCTCGGCCCAGCGCCATACCGCAGCCTTCTCACACCCCGTCGGATCCCGTGCGGA
GCGCGCAGTTTTGCCGCAACAACAGCGATTCTGCCGCGCGGTGACAGCAATCGGCCAGTATTGTCCACCTTGCAG
TCCGGGACATGCTTTCAACAGCAGAGATGGATTACACAAAAGTATATCCAGCGTATGAAAGACGGGGAGCAGGAA
TGGGCCGGCTTCGCGGAGGAGATCAAAGCCGGGAAGAGGAAGAACTTCGCGCAACACTTGGAAGAGCGAGGATTG
ATCCATGATGTTGTCGGTGAACGGGACTTGTTGCACAAGGTCTTCACAGAGAAGCGGGTTGGAATATATGTTGGA
GTCGACCCGACTGCCCCCTCAATGCACGTTGGACACATGCTTCCTTTCATGGTTCTGGCCTGGGGATATGTCTGG
GGATTACCTGTGACATTTCTACTCGGCGGTGCTACTTCTAGAGTCGGCGACCCCAGCGGGCGCCTCAAAGGCCGA
GATGCTGTCCATTCCTCAATCCGGAAAGCAAACATGGCTAGCATGCATATGCAGTTGAAGAAGTTGGGCTCGAGC
ATTGAGCACTACGGCAGGAGACACGGACACGAGAAGAACCCAATGTGGAAGCGGGCGTTGACAAATAACAACACT
TGGTGGAACTCGATGCCCTTCCTTGAAGTGTTGCGAGACCTTGGCGCTTTCATGCGACTTGGTCCCATGCTCGGC
AGAGATACTGTCAAGACGCGATTGAACCAAGGAGATGGCATGTCATTTGCTGAGTTTTCCTATCCTATTCTCCAG
GCATGGGATTGGTGGACGCTGTTCCAACAGGGCACTCAAATCCAAGTCGGAGGTGCCGACCAATATGGAAATATT
CTGTTCGGTATGGAGGCTGTCAAGTCTATCAGCCGAAACACTGCCGACGAACAACTCCGCAATCCATTAGAATCA
GAATTAGATCGCCCGATCGGTTTCACTACGCCGCTTCTGACAACCCCGTCCGGCGAGAAGCTCGGCAAGTCTGCT
GGAAACGCCGTTTGGCTCGATAAGGACCTGACTTCTACATTCGAACTTTACCAGTACTTTGTGCGCACGCCTGAC
GATGTTGTCGAGCAATATCTCAAGATGTTCACTTTCGTACCCTTGCCTGAAATCGCTACCATCATGGAGGAGCAG
AACAAGGACCCATCTCAGCGCGTTGCGCAGCACAAGCTCGCGCATGAGTTTGTCGAGCTTATCCATGGTAAGGTC
GAAGCTGATGCCGTGGCTCTCCAACATCGCCAGCTATTCCGTCCCCGATCCTCAACCGCAGAGCCCACTCCTCTT
CCCAAGTCATCCTCTCCTCAATCTGGTCATCCGCAATCCCCCACCGCTGGCTTCTCGACTCCTCAGTCCGGAAAT
CCATATGCCCCCCAAACAAATTGGGCCAACATGGGAGATTTCAAGGTCACCCTGCCCGAATCGCTGGTTTTCAAC
CAGCCGTTCAATAAAATTCTATGGTCAGCCGGCCTTGTTTCATCCAAGAGCGAGGGCCACCGAGTCATCGTCAAC
AATGGCGCCAAAGTCGGCAGCCGTCCTGGTGATAGTGGCCCCATGTCAGACCAATTATCCTTCACACCTATCCGG
CCGTGGGACGCAGAGAAAACAAAGGAGTTTGTCTTGAACGGCAACCTTCTAATGTTAAAGTTGGGCAAATGGAAG
CTCAAGGCTGTTCACATTGTGCCCGATGAAGAATATCGTGCGCAAGGTCTCACGGCTCCTGGATGGGAGACTGAA
TCTGAGTAG
Transcript >Pro_DTO070G2_2|g4002.t1
ATGCGACTACAGTCGGCATCGCTCGGCCCAGCGCCATACCGCAGCCTTCTCACACCCCGTCGGATCCCGTGCGGA
GCGCGCAGTTTTGCCGCAACAACAGCGATTCTGCCGCGCGGTGACAGCAATCGGCCAGTATTGTCCACCTTGCAG
TCCGGGACATGCTTTCAACAGCAGAGATGGATTACACAAAAGTATATCCAGCGTATGAAAGACGGGGAGCAGGAA
TGGGCCGGCTTCGCGGAGGAGATCAAAGCCGGGAAGAGGAAGAACTTCGCGCAACACTTGGAAGAGCGAGGATTG
ATCCATGATGTTGTCGGTGAACGGGACTTGTTGCACAAGGTCTTCACAGAGAAGCGGGTTGGAATATATGTTGGA
GTCGACCCGACTGCCCCCTCAATGCACGTTGGACACATGCTTCCTTTCATGGTTCTGGCCTGGGGATATGTCTGG
GGATTACCTGTGACATTTCTACTCGGCGGTGCTACTTCTAGAGTCGGCGACCCCAGCGGGCGCCTCAAAGGCCGA
GATGCTGTCCATTCCTCAATCCGGAAAGCAAACATGGCTAGCATGCATATGCAGTTGAAGAAGTTGGGCTCGAGC
ATTGAGCACTACGGCAGGAGACACGGACACGAGAAGAACCCAATGTGGAAGCGGGCGTTGACAAATAACAACACT
TGGTGGAACTCGATGCCCTTCCTTGAAGTGTTGCGAGACCTTGGCGCTTTCATGCGACTTGGTCCCATGCTCGGC
AGAGATACTGTCAAGACGCGATTGAACCAAGGAGATGGCATGTCATTTGCTGAGTTTTCCTATCCTATTCTCCAG
GCATGGGATTGGTGGACGCTGTTCCAACAGGGCACTCAAATCCAAGTCGGAGGTGCCGACCAATATGGAAATATT
CTGTTCGGTATGGAGGCTGTCAAGTCTATCAGCCGAAACACTGCCGACGAACAACTCCGCAATCCATTAGAATCA
GAATTAGATCGCCCGATCGGTTTCACTACGCCGCTTCTGACAACCCCGTCCGGCGAGAAGCTCGGCAAGTCTGCT
GGAAACGCCGTTTGGCTCGATAAGGACCTGACTTCTACATTCGAACTTTACCAGTACTTTGTGCGCACGCCTGAC
GATGTTGTCGAGCAATATCTCAAGATGTTCACTTTCGTACCCTTGCCTGAAATCGCTACCATCATGGAGGAGCAG
AACAAGGACCCATCTCAGCGCGTTGCGCAGCACAAGCTCGCGCATGAGTTTGTCGAGCTTATCCATGGTAAGGTC
GAAGCTGATGCCGTGGCTCTCCAACATCGCCAGCTATTCCGTCCCCGATCCTCAACCGCAGAGCCCACTCCTCTT
CCCAAGTCATCCTCTCCTCAATCTGGTCATCCGCAATCCCCCACCGCTGGCTTCTCGACTCCTCAGTCCGGAAAT
CCATATGCCCCCCAAACAAATTGGGCCAACATGGGAGATTTCAAGGTCACCCTGCCCGAATCGCTGGTTTTCAAC
CAGCCGTTCAATAAAATTCTATGGTCAGCCGGCCTTGTTTCATCCAAGAGCGAGGGCCACCGAGTCATCGTCAAC
AATGGCGCCAAAGTCGGCAGCCGTCCTGGTGATAGTGGCCCCATGTCAGACCAATTATCCTTCACACCTATCCGG
CCGTGGGACGCAGAGAAAACAAAGGAGTTTGTCTTGAACGGCAACCTTCTAATGTTAAAGTTGGGCAAATGGAAG
CTCAAGGCTGTTCACATTGTGCCCGATGAAGAATATCGTGCGCAAGGTCTCACGGCTCCTGGATGGGAGACTGAA
TCTGAGTAG
Gene >Pro_DTO070G2_2|g4002.t1
ATGCGACTACAGTCGGCATCGCTCGGCCCAGCGCCATACCGCAGCCTTCTCACACCCCGTCGGATCCCGTGCGGA
GCGCGCAGTTTTGCCGCAACAACAGCGATTCTGCCGCGCGGTGACAGCAATCGGCCAGTATTGTCCACCTTGCAG
TCCGGGACATGCTTTCAACAGCAGAGATGGATTACACAAAAGTATATCCAGCGTATGAAAGACGGGGAGCAGGAA
TGGGCCGGCTTCGCGGAGGAGATCAAAGCCGGGAAGAGGAAGAACTTCGCGCAACACTTGGAAGAGCGAGGATTG
ATCCATGATGTTGTCGGGTATGTGCACACTAGGATATAATGAAGTTGCTGGCATTTGCTGCCGGAAAGGTTTTGA
ATGGCTCGCTAATCGTTTCCTTTCGATTACAGTGAACGGGACTTGTTGCACAAGGTCTTCACAGAGAAGCGGGTT
GGAATATATGTTGGAGTCGACCCGACTGCCCCCTCAATGCACGTTGGACACATGCTTCCTTTCATGGTTCTGGCC
TGGGGATATGTCTGGGGATTACCTGTGACATTTCTAGTAAGTTGCCTACTTCACGCCAAATTGAATGCACCAACC
TAATACTCCATAGCTCGGCGGTGCTACTTCTAGAGTCGGCGACCCCAGCGGGCGCCTCAAAGGCCGAGATGCTGT
CCATTCCTCAATCCGGAAAGCAAACATGGCTAGCATGCATATGCAGTTGAAGAAGTTGGGCTCGAGCATTGAGCA
CTACGGCAGGAGACACGGACACGAGAAGAACCCAATGTGGAAGCGGGCGTTGACAAATAACAACACTTGGTGGAA
CTCGATGCCCTTCCTTGAAGTGTTGCGAGACCTTGGCGCTTTCATGCGACTTGGTCCCATGCTCGGCAGAGATAC
GTGAGTTTTGGCAGGTCCGACAGTGCTGTTGACGCGGGTTTACTGAACTTTTCTACTAGTGTCAAGACGCGATTG
AACCAAGGAGATGGCATGTCATTTGCTGAGTTTTCCTATCCTATTCTCCAGGCATGGGATTGGTGGACGCTGTTC
CAACAGGGCACTCAAATCCAAGTCGGAGGTGCCGACCAATATGGAAATATTCTGTTCGGTATGGAGGCTGTCAAG
TCTATCAGCCGAAACACTGCCGACGAACAACTCCGCAATCCATTAGAATCAGAATTAGATCGCCCGATCGGTTTC
ACTACGCCGCTTCTGACAACCCCGTCCGGCGAGAAGCTCGGCAAGTCTGCTGGAAACGCCGTTTGGCTCGATAAG
GACCTGACTTCTACATTCGAACTTTACCAGTACTTTGTGCGCACGCCTGACGATGTTGTCGAGCAATATCTCAAG
ATGTTCACTTTCGTACCCTTGCCTGAAATCGCTACCATCATGGAGGAGCAGAACAAGGACCCATCTCAGCGCGTT
GCGCAGCACAAGCTCGCGCATGAGTTTGTCGAGCTTATCCATGGTAAGGTCGAAGCTGATGCCGTGGCTCTCCAA
CATCGCCAGCTATTCCGTCCCCGATCCTCAACCGCAGAGCCCACTCCTCTTCCCAAGTCATCCTCTCCTCAATCT
GGTCATCCGCAATCCCCCACCGCTGGCTTCTCGACTCCTCAGTCCGGAAATCCATATGCCCCCCAAACAAATTGG
GCCAACATGGGAGATTTCAAGGTCACCCTGCCCGAATCGCTGGTTTTCAACCAGCCGTTCAATAAAATTCTATGG
TCAGCCGGCCTTGTTTCATCCAAGAGCGAGGGCCACCGAGTCATCGTCAACAATGGCGCCAAAGTCGGCAGCCGT
CCTGGTGATAGTGGCCCCATGTCAGACCAATTATCCTTCACACCTATCCGGCCGTGGGACGCAGAGAAAACAAAG
GAGTTTGTCTTGAACGGCAACCTTCTAATGTTAAAGTTGGGCAAATGGAAGCTCAAGGCTGTTCACATTGTGCCC
GATGAAGAATATCGTGCGCAAGGTCTCACGGCTCCTGGATGGGAGACTGAATCTGAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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