Protein ID | Pro_DTO070G2_2|g3977.t1 |
Gene name | |
Location | scaffold_04:459014..460951 |
Strand | - |
Gene length (bp) | 1937 |
Transcript length (bp) | 1830 |
Coding sequence length (bp) | 1830 |
Protein length (aa) | 610 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00305 | Lipoxygenase | Lipoxygenase | 9.0E-18 | 259 | 504 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Yes |
GO:0046872 | metal ion binding | Yes |
GO:0016491 | oxidoreductase activity | No |
GO:0005488 | binding | No |
GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
GO:0043169 | cation binding | No |
GO:0043167 | ion binding | No |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0051213 | dioxygenase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.5 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g3977.t1 MTLFPIYKLLLSFLYIGNAVAWPIISVQSVLKPFAALPDDNGPKYSLPMFDTRSWERVDEIRLARAGYIYGPPLL GNTSFFPTGVLGEAMVARDRVAWFKDVEYVTNNVYLELDKAAAALIKVGGIQSLSSYEILYKDQWASSLPDGVSP GMLTNWTQDLLFSMERLSTNPYVVRRLHPRIGSLPFPVEDGVVQHLAEGRTLADLHQEGRLFYADHSYQAPYPKT PGRWTAACTAYFYIHPGSGDFLPLAIKTNMGKNLTYTPRDDANDWLFAKMAFGMNDLFHSQLYHLANTHDVAEPV HQAALRTMSSRHPVRGYLDRLMYQAYAVRPIGEEFLFNEGGFYDSSFAVPNWAGKKFATDAYWEHAGHFRSTNFY RDFADRGLLDCAYGPPLRSFPFYETVAPMVQAIEDFTRSFVEYSYPKSSLMGSDHELQAWIMEATSEAQVIDFFP APLFAREDLVSILSHMAFLSGIAHHALNGATVGEALGVLPLHPSSFNQPLPETKGGIESLIPWLHNETEALKQAS LLVRFNRPLLDEQKGNLPHMFWETEFLGPAGSDLHAAEGKFRATMLAISEEIRTRQFDEDGLSQGMPFIWRSIDP RKIPYYLCV* |
Coding | >Pro_DTO070G2_2|g3977.t1 ATGACACTCTTCCCTATTTATAAGCTTTTGCTATCATTCCTCTATATTGGCAATGCTGTTGCTTGGCCAATTATT TCCGTTCAGTCGGTTCTGAAACCTTTCGCTGCACTTCCCGACGACAATGGTCCTAAGTACAGCCTTCCAATGTTT GACACCAGGTCCTGGGAAAGAGTAGACGAGATTCGTCTAGCTCGAGCAGGATATATCTATGGGCCCCCTTTACTC GGAAACACATCCTTCTTCCCTACCGGGGTTCTGGGAGAAGCAATGGTAGCCCGAGACAGGGTTGCGTGGTTCAAA GATGTGGAATATGTCACCAACAACGTCTACCTTGAGTTGGACAAGGCCGCTGCAGCACTGATTAAGGTGGGGGGC ATACAATCACTCTCTAGCTATGAGATTCTTTACAAAGATCAATGGGCCTCCTCACTCCCGGACGGTGTATCCCCC GGGATGCTGACCAACTGGACCCAAGATCTGCTTTTCTCCATGGAGAGGCTTTCTACTAATCCCTACGTGGTTCGA CGCCTACATCCCAGAATTGGCAGTCTCCCTTTTCCAGTAGAAGATGGGGTGGTGCAACACCTGGCTGAGGGTCGA ACACTGGCGGATCTACACCAGGAAGGACGTCTCTTCTATGCTGACCATTCCTATCAAGCCCCTTACCCCAAGACT CCTGGGCGCTGGACAGCCGCTTGTACCGCGTATTTCTATATCCATCCTGGATCTGGCGATTTCCTTCCATTGGCT ATCAAGACTAACATGGGGAAAAACCTTACATATACGCCACGGGACGACGCAAATGACTGGCTTTTCGCCAAAATG GCCTTTGGCATGAACGATCTCTTCCATTCCCAGCTATACCATCTAGCAAATACACATGATGTCGCTGAGCCCGTG CACCAGGCTGCCTTGCGAACCATGAGCTCGCGGCATCCTGTCCGTGGATACCTTGACCGCTTAATGTATCAGGCA TATGCGGTTCGACCCATTGGTGAGGAATTCCTTTTCAATGAAGGCGGTTTCTACGACAGCTCCTTCGCGGTTCCA AACTGGGCCGGCAAGAAGTTCGCAACAGACGCCTATTGGGAGCACGCGGGTCACTTCCGGTCCACGAATTTTTAT CGGGATTTCGCAGACCGTGGTCTTCTAGATTGCGCGTATGGGCCTCCGCTCCGCTCCTTCCCATTCTATGAGACT GTGGCACCCATGGTGCAAGCCATCGAAGACTTCACTCGTTCTTTCGTGGAATATTCCTACCCCAAGAGCAGTCTG ATGGGCAGCGACCACGAACTACAAGCCTGGATCATGGAGGCCACCAGTGAGGCTCAAGTCATTGACTTTTTCCCT GCCCCATTATTCGCGCGCGAGGATCTTGTCTCGATTCTCTCCCACATGGCATTCCTCTCTGGGATTGCGCATCAT GCACTCAATGGTGCGACTGTCGGGGAGGCCCTGGGTGTGCTTCCGTTGCATCCCTCCTCCTTCAACCAGCCACTT CCTGAGACTAAAGGGGGCATCGAATCGCTGATCCCGTGGCTGCATAACGAGACCGAGGCACTGAAGCAAGCTTCG CTCCTCGTCAGGTTCAACCGACCATTGTTGGATGAGCAGAAAGGAAACCTTCCGCATATGTTCTGGGAGACCGAA TTCTTAGGCCCGGCTGGAAGCGATCTTCATGCTGCCGAGGGGAAGTTTCGGGCGACGATGTTAGCTATCAGTGAA GAAATCCGGACAAGGCAATTCGACGAGGATGGTTTATCGCAGGGTATGCCTTTTATCTGGCGTTCGATTGATCCG AGGAAGATTCCTTACTACTTGTGTGTGTAG |
Transcript | >Pro_DTO070G2_2|g3977.t1 ATGACACTCTTCCCTATTTATAAGCTTTTGCTATCATTCCTCTATATTGGCAATGCTGTTGCTTGGCCAATTATT TCCGTTCAGTCGGTTCTGAAACCTTTCGCTGCACTTCCCGACGACAATGGTCCTAAGTACAGCCTTCCAATGTTT GACACCAGGTCCTGGGAAAGAGTAGACGAGATTCGTCTAGCTCGAGCAGGATATATCTATGGGCCCCCTTTACTC GGAAACACATCCTTCTTCCCTACCGGGGTTCTGGGAGAAGCAATGGTAGCCCGAGACAGGGTTGCGTGGTTCAAA GATGTGGAATATGTCACCAACAACGTCTACCTTGAGTTGGACAAGGCCGCTGCAGCACTGATTAAGGTGGGGGGC ATACAATCACTCTCTAGCTATGAGATTCTTTACAAAGATCAATGGGCCTCCTCACTCCCGGACGGTGTATCCCCC GGGATGCTGACCAACTGGACCCAAGATCTGCTTTTCTCCATGGAGAGGCTTTCTACTAATCCCTACGTGGTTCGA CGCCTACATCCCAGAATTGGCAGTCTCCCTTTTCCAGTAGAAGATGGGGTGGTGCAACACCTGGCTGAGGGTCGA ACACTGGCGGATCTACACCAGGAAGGACGTCTCTTCTATGCTGACCATTCCTATCAAGCCCCTTACCCCAAGACT CCTGGGCGCTGGACAGCCGCTTGTACCGCGTATTTCTATATCCATCCTGGATCTGGCGATTTCCTTCCATTGGCT ATCAAGACTAACATGGGGAAAAACCTTACATATACGCCACGGGACGACGCAAATGACTGGCTTTTCGCCAAAATG GCCTTTGGCATGAACGATCTCTTCCATTCCCAGCTATACCATCTAGCAAATACACATGATGTCGCTGAGCCCGTG CACCAGGCTGCCTTGCGAACCATGAGCTCGCGGCATCCTGTCCGTGGATACCTTGACCGCTTAATGTATCAGGCA TATGCGGTTCGACCCATTGGTGAGGAATTCCTTTTCAATGAAGGCGGTTTCTACGACAGCTCCTTCGCGGTTCCA AACTGGGCCGGCAAGAAGTTCGCAACAGACGCCTATTGGGAGCACGCGGGTCACTTCCGGTCCACGAATTTTTAT CGGGATTTCGCAGACCGTGGTCTTCTAGATTGCGCGTATGGGCCTCCGCTCCGCTCCTTCCCATTCTATGAGACT GTGGCACCCATGGTGCAAGCCATCGAAGACTTCACTCGTTCTTTCGTGGAATATTCCTACCCCAAGAGCAGTCTG ATGGGCAGCGACCACGAACTACAAGCCTGGATCATGGAGGCCACCAGTGAGGCTCAAGTCATTGACTTTTTCCCT GCCCCATTATTCGCGCGCGAGGATCTTGTCTCGATTCTCTCCCACATGGCATTCCTCTCTGGGATTGCGCATCAT GCACTCAATGGTGCGACTGTCGGGGAGGCCCTGGGTGTGCTTCCGTTGCATCCCTCCTCCTTCAACCAGCCACTT CCTGAGACTAAAGGGGGCATCGAATCGCTGATCCCGTGGCTGCATAACGAGACCGAGGCACTGAAGCAAGCTTCG CTCCTCGTCAGGTTCAACCGACCATTGTTGGATGAGCAGAAAGGAAACCTTCCGCATATGTTCTGGGAGACCGAA TTCTTAGGCCCGGCTGGAAGCGATCTTCATGCTGCCGAGGGGAAGTTTCGGGCGACGATGTTAGCTATCAGTGAA GAAATCCGGACAAGGCAATTCGACGAGGATGGTTTATCGCAGGGTATGCCTTTTATCTGGCGTTCGATTGATCCG AGGAAGATTCCTTACTACTTGTGTGTGTAG |
Gene | >Pro_DTO070G2_2|g3977.t1 ATGACACTCTTCCCTATTTATAAGCTTTTGCTATCATTCCTCTATATTGGCAATGCTGTTGCTTGGCCAATTATT TCCGTTCAGTCGGTTCTGAAACCTTTCGCTGCACTTCCCGACGACAATGGTCCTAAGTACAGCCTTCCAATGTTT GACACCAGGTCCTGGGAAAGAGTAGACGAGATTCGTCTAGCTCGAGCAGGATATATCTATGGGCCCCCTTTACTC GGAAACACATCCTTCTTCCCTACCGGGGTTCTGGGAGAAGCAATGGTAGCCCGAGACAGGGTTGCGTGGTTCAAA GATGTGGAATATGTCACCAACAACGTCTACCTTGAGTTGGACAAGGCCGCTGCAGCACTGATTAAGGTATACCGG CAGAAGTCCCTTTGTCTAAAATGGGCCCTAGCTAATCATATAAGGTGGGGGGCATACAATCACTCTCTAGCTATG AGATTCTTTACAAAGATCAATGGGCCTCCTCACTCCCGGACGGTGTATCCCCCGGGATGCTGACCAACTGGACCC AAGATCTGCTTTTCTCCATGGAGAGGCTTTCTACTAATCCCTACGTGGTTCGACGCCTACATCCCAGAATTGGCA GTCTCCCTTTTCCAGTAGAAGATGGGGTGGTGCAACACCTGGCTGAGGGTCGAACACTGGCGGATCTACACCAGG AAGGACGTCTCTTCTATGCTGACCATTCCTATCAAGCCCCTTACCCCAAGACTCCTGGGCGCTGGACAGCCGCTT GTACCGCGTATTTCTATATCCATCCTGGATCTGGCGATTTCCTTCCATTGGCTATCAAGACTAACATGGGGAAAA ACCTTACATATACGCCACGGGACGACGCAAATGACTGGCTTTTCGCCAAAATGGCCTTTGGCATGAACGATCTCT TCCATTCCCAGCTATACCATCTAGCAAATACACATGATGTCGCTGAGCCCGTGCACCAGGCTGCCTTGCGAACCA TGAGCTCGCGGCATCCTGTCCGTGGATACCTTGACCGCTGTATGTTGCTCTCCCTTCGGCGTTTCAAAATTCAAC GCAGCTAATTATTCAAAGTAATGTATCAGGCATATGCGGTTCGACCCATTGGTGAGGAATTCCTTTTCAATGAAG GCGGTTTCTACGACAGCTCCTTCGCGGTTCCAAACTGGGCCGGCAAGAAGTTCGCAACAGACGCCTATTGGGAGC ACGCGGGTCACTTCCGGTCCACGAATTTTTATCGGGATTTCGCAGACCGTGGTCTTCTAGATTGCGCGTATGGGC CTCCGCTCCGCTCCTTCCCATTCTATGAGACTGTGGCACCCATGGTGCAAGCCATCGAAGACTTCACTCGTTCTT TCGTGGAATATTCCTACCCCAAGAGCAGTCTGATGGGCAGCGACCACGAACTACAAGCCTGGATCATGGAGGCCA CCAGTGAGGCTCAAGTCATTGACTTTTTCCCTGCCCCATTATTCGCGCGCGAGGATCTTGTCTCGATTCTCTCCC ACATGGCATTCCTCTCTGGGATTGCGCATCATGCACTCAATGGTGCGACTGTCGGGGAGGCCCTGGGTGTGCTTC CGTTGCATCCCTCCTCCTTCAACCAGCCACTTCCTGAGACTAAAGGGGGCATCGAATCGCTGATCCCGTGGCTGC ATAACGAGACCGAGGCACTGAAGCAAGCTTCGCTCCTCGTCAGGTTCAACCGACCATTGTTGGATGAGCAGAAAG GAAACCTTCCGCATATGTTCTGGGAGACCGAATTCTTAGGCCCGGCTGGAAGCGATCTTCATGCTGCCGAGGGGA AGTTTCGGGCGACGATGTTAGCTATCAGTGAAGAAATCCGGACAAGGCAATTCGACGAGGATGGTTTATCGCAGG GTATGCCTTTTATCTGGCGTTCGATTGATCCGAGGAAGATTCCTTACTACTTGTGTGTGTAG |