Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g3874.t1
Gene name
Locationscaffold_04:197522..198332
Strand-
Gene length (bp)810
Transcript length (bp)753
Coding sequence length (bp)753
Protein length (aa) 251

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01670 Glyco_hydro_12 Glycosyl hydrolase family 12 8.5E-46 47 249

GO

GO Term Description Terminal node
GO:0000272 polysaccharide catabolic process Yes
GO:0008810 cellulase activity Yes
GO:0009056 catabolic process No
GO:0003674 molecular_function No
GO:0016052 carbohydrate catabolic process No
GO:0008150 biological_process No
GO:0003824 catalytic activity No
GO:0005976 polysaccharide metabolic process No
GO:0016787 hydrolase activity No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0009057 macromolecule catabolic process No
GO:1901575 organic substance catabolic process No
GO:0043170 macromolecule metabolic process No
GO:0008152 metabolic process No
GO:0005975 carbohydrate metabolic process No
GO:0044238 primary metabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0071704 organic substance metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999765

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH12 4.0E-46 103 249

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup6174
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g6781.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g6089.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g6604.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g3325.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g5284.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g6691.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g6869.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g6677.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g7727.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g3094.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g7943.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g4764.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g3466.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g7918.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g875.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g5742.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g7770.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g4825.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g3874.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g7709.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g3299.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g6014.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g6604.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g5031.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g6449.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g6455.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g4401.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g6958.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g6289.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g3320.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g4857.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g5792.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g5966.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g6206.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g3874.t1
MKSFIAPVSLLCLGLSAMGNAARAPVKAIARRADFCDQWGTTTTDTYILYNNLWNEAQDPSGTQCTGLDSSSGSK
IAWHTSWSWAGATNQVKSYASASLQFTPKTLSAISSIESVWDWSYSTTDIVADVAYDMFLSSTADGSEEYEIMVW
LAALGGAGPISSTGKAIATVTINGVEWDVWVGPNGQMTVYSFVAKSTVTSFSGDLLKFFTYLVNDQGLSNSKYLI
DVQAGTEPFTGTAKLTVSSYSVAVV*
Coding >Pro_DTO070G2_2|g3874.t1
ATGAAGTCCTTCATCGCACCCGTGTCCCTCCTCTGCCTGGGACTGTCGGCCATGGGCAACGCCGCCAGGGCCCCA
GTCAAGGCCATCGCTCGTCGCGCAGACTTCTGCGATCAGTGGGGCACAACCACAACGGACACCTACATCCTCTAC
AACAACCTCTGGAACGAAGCCCAAGACCCCTCCGGCACGCAGTGCACAGGGCTAGACTCGAGCAGCGGCAGTAAG
ATCGCGTGGCACACCTCGTGGTCGTGGGCCGGTGCCACGAACCAGGTCAAGAGCTACGCCAGTGCCTCGCTGCAG
TTCACTCCTAAGACGCTGAGTGCTATTAGCAGCATCGAGTCCGTTTGGGACTGGAGCTACTCGACTACCGATATC
GTCGCCGATGTCGCTTACGACATGTTTCTCAGTTCTACTGCTGACGGCAGCGAGGAGTACGAGATCATGGTGTGG
CTTGCGGCTCTGGGCGGTGCGGGCCCGATCTCGAGCACTGGCAAGGCCATCGCGACGGTTACTATCAATGGTGTC
GAATGGGATGTGTGGGTTGGTCCCAATGGCCAGATGACTGTTTACAGCTTCGTCGCCAAGTCGACCGTTACGAGC
TTCTCCGGTGACCTGTTGAAGTTCTTTACGTACCTTGTCAACGACCAGGGTCTGAGCAACAGCAAATACTTGATT
GATGTGCAGGCTGGCACTGAGCCTTTCACTGGTACTGCTAAGTTGACTGTTTCTTCTTACTCGGTCGCTGTTGTT
TAA
Transcript >Pro_DTO070G2_2|g3874.t1
ATGAAGTCCTTCATCGCACCCGTGTCCCTCCTCTGCCTGGGACTGTCGGCCATGGGCAACGCCGCCAGGGCCCCA
GTCAAGGCCATCGCTCGTCGCGCAGACTTCTGCGATCAGTGGGGCACAACCACAACGGACACCTACATCCTCTAC
AACAACCTCTGGAACGAAGCCCAAGACCCCTCCGGCACGCAGTGCACAGGGCTAGACTCGAGCAGCGGCAGTAAG
ATCGCGTGGCACACCTCGTGGTCGTGGGCCGGTGCCACGAACCAGGTCAAGAGCTACGCCAGTGCCTCGCTGCAG
TTCACTCCTAAGACGCTGAGTGCTATTAGCAGCATCGAGTCCGTTTGGGACTGGAGCTACTCGACTACCGATATC
GTCGCCGATGTCGCTTACGACATGTTTCTCAGTTCTACTGCTGACGGCAGCGAGGAGTACGAGATCATGGTGTGG
CTTGCGGCTCTGGGCGGTGCGGGCCCGATCTCGAGCACTGGCAAGGCCATCGCGACGGTTACTATCAATGGTGTC
GAATGGGATGTGTGGGTTGGTCCCAATGGCCAGATGACTGTTTACAGCTTCGTCGCCAAGTCGACCGTTACGAGC
TTCTCCGGTGACCTGTTGAAGTTCTTTACGTACCTTGTCAACGACCAGGGTCTGAGCAACAGCAAATACTTGATT
GATGTGCAGGCTGGCACTGAGCCTTTCACTGGTACTGCTAAGTTGACTGTTTCTTCTTACTCGGTCGCTGTTGTT
TAA
Gene >Pro_DTO070G2_2|g3874.t1
ATGAAGTCCTTCATCGCACCCGTGTCCCTCCTCTGCCTGGGACTGTCGGCCATGGGCAACGCCGCCAGGGCCCCA
GTCAAGGCCATCGCTCGTCGCGCAGACTTCTGCGATCAGTGGGGCACAACCACAACGGACACCTACATCCTCTAC
AACAACCTCTGGAACGAAGCCCAAGACCCCTCCGGCACGCAGTGCACAGGGCTAGACTCGAGCAGCGGCAGTAAG
ATCGCGTGGCACACCTCGTGGTCGTGGGCCGGTGCCACGAACCAGGTCAAGAGCTACGCCAGTGCCTCGCTGCAG
TTCACTCCTAAGACGCTGAGTGCTATTAGCAGCATCGAGTCCGTTTGGGACTGGAGGTAAGCCTGGTGCACATGG
TTTCTTTAGAACGAACAGCCCTAACCATCTCTGAATAGCTACTCGACTACCGATATCGTCGCCGATGTCGCTTAC
GACATGTTTCTCAGTTCTACTGCTGACGGCAGCGAGGAGTACGAGATCATGGTGTGGCTTGCGGCTCTGGGCGGT
GCGGGCCCGATCTCGAGCACTGGCAAGGCCATCGCGACGGTTACTATCAATGGTGTCGAATGGGATGTGTGGGTT
GGTCCCAATGGCCAGATGACTGTTTACAGCTTCGTCGCCAAGTCGACCGTTACGAGCTTCTCCGGTGACCTGTTG
AAGTTCTTTACGTACCTTGTCAACGACCAGGGTCTGAGCAACAGCAAATACTTGATTGATGTGCAGGCTGGCACT
GAGCCTTTCACTGGTACTGCTAAGTTGACTGTTTCTTCTTACTCGGTCGCTGTTGTTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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