Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g3847.t1
Gene name
Locationscaffold_04:127967..130300
Strand-
Gene length (bp)2333
Transcript length (bp)2223
Coding sequence length (bp)2223
Protein length (aa) 741

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.7E-17 47 116
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3.8E-17 135 202
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.2E-19 228 296
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.7E-08 331 368
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5.7E-06 424 460
PF00658 PABP Poly-adenylate binding protein, unique domain 1.3E-28 645 709
PF13893 RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.7E-03 32 123
PF13893 RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7.4E-02 133 214

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup6829
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g7515.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g9816.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g7053.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g3352.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g5257.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g6664.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g6896.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g9140.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g8412.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g3120.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g3903.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g4790.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g3439.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g7945.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g901.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g5715.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g7796.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g4851.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g3847.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g8985.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g3272.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g6041.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g6631.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g5004.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g6422.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g9873.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g4374.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g6931.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g6262.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g3293.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g4830.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g5765.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g5939.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g6179.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g3847.t1
MSAEAPATAPVTDNVVAATPEANGAPVEATSEAAGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIR
VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALH
DTFAAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANF
TNIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVAEMNEKDVKTQKLYVGR
AQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRDLFTPYGTITSAKVMRDAAERSPSPEAEE
KEADKETKDSEEKEVKTEESTEAKTEEPTEEKKTEEEGEDTEEKKTEKKAFGKSKGFGFVCFSSPDEASKAVTEM
NQRMVNAKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQPFMQPAVFYGAGQQGFMPPGQRGGMPF
APQGGMPMPNMPAGRPQYPGPFPQGGRGMPPNQQLPPNFQGMPMGMQAPGGIPNGMGYPMPQAFGRGGGGRGVPG
MPMNMRGGPGFGRGGPQMGRGGGRGQPAPGGQPAGGEPASANQALLTAPPAQQKQMLGEALYPKIQAQQPELAGK
ITGMLLEMDNAELLGLLDDEEALRGKVDEALNVYDEYMKNKGDGETTEPKPQEAAKEAPVEENKS*
Coding >Pro_DTO070G2_2|g3847.t1
ATGTCTGCTGAAGCCCCCGCCACCGCTCCTGTCACTGACAACGTTGTCGCCGCTACCCCTGAGGCCAATGGCGCC
CCCGTCGAGGCCACTTCCGAGGCCGCCGGTGATGCTGCCAACAACCAGCCCCACTCGGCTTCCCTCTACGTCGGC
GAGCTTGACCCCTCCGTGACTGAGGCTATGCTCTACGAGCTATTCTCTTCCATCGGCCAGGTCGCCTCTATCCGT
GTCTGCCGTGATGCCGTCACCCGCCGGTCCTTGGGCTACGCCTACGTCAACTACAACAACACCGCTGACGGCGAG
CGTGCTCTTGAGGATCTGAACTACACTCTCATCAAGGGAAAGCCTTGCCGCATCATGTGGTCCCAGCGTGACCCC
GCTCTGCGCAAGACTGGCCAGGGCAACGTGTTCATCAAGAACCTTGACAACGCCATTGACAACAAGGCTCTCCAC
GACACCTTCGCTGCCTTCGGCAACATTCTCAGCTGCAAGGTCGCCCAGGATGAGTTCGCCAACTCCAAGGGCTAC
GGTTTCGTCCACTACGAGACCGCCGAAGCCGCCAACAACGCCATCAAGCACGTTAACGGTATGCTGCTGAATGAC
AAGAAGGTCTTCGTCGGACACCACATCTCCAAGAAGGACCGCCAAAGCAAGTTCGAGGAGATGAAGGCCAACTTC
ACCAACATCTACATCAAGAACATCGATCTCGAGATTACCGACGACGAGTTCCGCGTCATGTTCGAGGCCTTTGGT
GAGATCACCTCCGCCACCCTCAGCCACGACCAGGATGGCAAGAGCCGCGGTTTCGGCTTTGTTAACTACGCCAAC
CACGAGAGCGCCGAGGCCGCTGTGGCTGAGATGAACGAGAAGGACGTCAAGACTCAGAAGCTTTACGTTGGCCGT
GCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCATGGAGAAGGCCTCCAAG
TACCAGGGTGTCAACCTCTACGTTAAGAACTTGACCGACGACATTGATGATGAGAAGCTCCGTGACCTCTTCACT
CCTTACGGTACTATCACTTCCGCCAAGGTTATGCGTGATGCCGCCGAACGTTCTCCCTCCCCCGAGGCCGAGGAG
AAGGAGGCCGACAAGGAGACCAAGGACTCCGAGGAGAAGGAGGTGAAGACCGAGGAGAGCACCGAGGCGAAGACT
GAGGAGCCTACCGAGGAGAAGAAGACCGAGGAGGAGGGCGAGGACACCGAGGAGAAGAAGACAGAGAAGAAGGCC
TTCGGTAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAGGCTGTCACCGAGATG
AACCAGCGTATGGTCAACGCCAAGCCCCTCTACGTTGCTCTCGCTCAGCGCAAGGATGTCCGCCGCAGCCAGCTC
GAGGCTAGCATCCAGGCTCGCAACACTATCCGCCAGCAGCAGGCCGCAGCCGCTGCCGGTATGCCCCAGCCTTTC
ATGCAGCCCGCCGTCTTCTACGGTGCTGGCCAGCAGGGCTTCATGCCCCCTGGACAGCGTGGTGGTATGCCATTC
GCCCCCCAGGGCGGTATGCCCATGCCTAACATGCCCGCTGGACGTCCCCAGTACCCCGGTCCCTTCCCCCAAGGT
GGTCGTGGTATGCCCCCCAACCAACAGCTTCCTCCCAACTTCCAGGGTATGCCTATGGGCATGCAGGCCCCTGGT
GGCATTCCTAACGGCATGGGCTACCCTATGCCCCAGGCTTTCGGACGTGGCGGCGGTGGCCGTGGTGTTCCCGGT
ATGCCCATGAACATGCGTGGTGGCCCCGGTTTCGGCCGTGGTGGTCCTCAGATGGGTCGTGGTGGTGGTCGCGGC
CAGCCCGCCCCTGGTGGTCAGCCCGCTGGTGGCGAGCCCGCCTCTGCCAACCAGGCTCTTCTCACCGCTCCCCCC
GCTCAGCAGAAGCAGATGCTCGGCGAGGCTCTTTACCCCAAGATCCAGGCTCAGCAGCCCGAGCTTGCTGGCAAG
ATCACTGGTATGCTTCTTGAGATGGATAACGCTGAGTTGCTTGGCCTGCTCGATGATGAGGAGGCTCTCCGCGGC
AAGGTCGATGAGGCCCTTAACGTCTATGATGAGTACATGAAGAACAAGGGTGATGGCGAGACCACCGAACCCAAG
CCCCAGGAAGCCGCCAAGGAGGCCCCTGTTGAGGAGAACAAGTCTTAA
Transcript >Pro_DTO070G2_2|g3847.t1
ATGTCTGCTGAAGCCCCCGCCACCGCTCCTGTCACTGACAACGTTGTCGCCGCTACCCCTGAGGCCAATGGCGCC
CCCGTCGAGGCCACTTCCGAGGCCGCCGGTGATGCTGCCAACAACCAGCCCCACTCGGCTTCCCTCTACGTCGGC
GAGCTTGACCCCTCCGTGACTGAGGCTATGCTCTACGAGCTATTCTCTTCCATCGGCCAGGTCGCCTCTATCCGT
GTCTGCCGTGATGCCGTCACCCGCCGGTCCTTGGGCTACGCCTACGTCAACTACAACAACACCGCTGACGGCGAG
CGTGCTCTTGAGGATCTGAACTACACTCTCATCAAGGGAAAGCCTTGCCGCATCATGTGGTCCCAGCGTGACCCC
GCTCTGCGCAAGACTGGCCAGGGCAACGTGTTCATCAAGAACCTTGACAACGCCATTGACAACAAGGCTCTCCAC
GACACCTTCGCTGCCTTCGGCAACATTCTCAGCTGCAAGGTCGCCCAGGATGAGTTCGCCAACTCCAAGGGCTAC
GGTTTCGTCCACTACGAGACCGCCGAAGCCGCCAACAACGCCATCAAGCACGTTAACGGTATGCTGCTGAATGAC
AAGAAGGTCTTCGTCGGACACCACATCTCCAAGAAGGACCGCCAAAGCAAGTTCGAGGAGATGAAGGCCAACTTC
ACCAACATCTACATCAAGAACATCGATCTCGAGATTACCGACGACGAGTTCCGCGTCATGTTCGAGGCCTTTGGT
GAGATCACCTCCGCCACCCTCAGCCACGACCAGGATGGCAAGAGCCGCGGTTTCGGCTTTGTTAACTACGCCAAC
CACGAGAGCGCCGAGGCCGCTGTGGCTGAGATGAACGAGAAGGACGTCAAGACTCAGAAGCTTTACGTTGGCCGT
GCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCATGGAGAAGGCCTCCAAG
TACCAGGGTGTCAACCTCTACGTTAAGAACTTGACCGACGACATTGATGATGAGAAGCTCCGTGACCTCTTCACT
CCTTACGGTACTATCACTTCCGCCAAGGTTATGCGTGATGCCGCCGAACGTTCTCCCTCCCCCGAGGCCGAGGAG
AAGGAGGCCGACAAGGAGACCAAGGACTCCGAGGAGAAGGAGGTGAAGACCGAGGAGAGCACCGAGGCGAAGACT
GAGGAGCCTACCGAGGAGAAGAAGACCGAGGAGGAGGGCGAGGACACCGAGGAGAAGAAGACAGAGAAGAAGGCC
TTCGGTAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAGGCTGTCACCGAGATG
AACCAGCGTATGGTCAACGCCAAGCCCCTCTACGTTGCTCTCGCTCAGCGCAAGGATGTCCGCCGCAGCCAGCTC
GAGGCTAGCATCCAGGCTCGCAACACTATCCGCCAGCAGCAGGCCGCAGCCGCTGCCGGTATGCCCCAGCCTTTC
ATGCAGCCCGCCGTCTTCTACGGTGCTGGCCAGCAGGGCTTCATGCCCCCTGGACAGCGTGGTGGTATGCCATTC
GCCCCCCAGGGCGGTATGCCCATGCCTAACATGCCCGCTGGACGTCCCCAGTACCCCGGTCCCTTCCCCCAAGGT
GGTCGTGGTATGCCCCCCAACCAACAGCTTCCTCCCAACTTCCAGGGTATGCCTATGGGCATGCAGGCCCCTGGT
GGCATTCCTAACGGCATGGGCTACCCTATGCCCCAGGCTTTCGGACGTGGCGGCGGTGGCCGTGGTGTTCCCGGT
ATGCCCATGAACATGCGTGGTGGCCCCGGTTTCGGCCGTGGTGGTCCTCAGATGGGTCGTGGTGGTGGTCGCGGC
CAGCCCGCCCCTGGTGGTCAGCCCGCTGGTGGCGAGCCCGCCTCTGCCAACCAGGCTCTTCTCACCGCTCCCCCC
GCTCAGCAGAAGCAGATGCTCGGCGAGGCTCTTTACCCCAAGATCCAGGCTCAGCAGCCCGAGCTTGCTGGCAAG
ATCACTGGTATGCTTCTTGAGATGGATAACGCTGAGTTGCTTGGCCTGCTCGATGATGAGGAGGCTCTCCGCGGC
AAGGTCGATGAGGCCCTTAACGTCTATGATGAGTACATGAAGAACAAGGGTGATGGCGAGACCACCGAACCCAAG
CCCCAGGAAGCCGCCAAGGAGGCCCCTGTTGAGGAGAACAAGTCTTAA
Gene >Pro_DTO070G2_2|g3847.t1
ATGTCTGCTGAAGCCCCCGCCACCGCTCCTGTCACTGACAACGTTGTCGCCGCTACCCCTGAGGCCAATGGCGCC
CCCGTCGAGGCCACTTCCGAGGCCGCCGGTGATGCTGCCAACAACCAGCCCCACTCGGCTTCCCTCTACGTCGGC
GAGCTTGACCCCTCCGTGACTGAGGCTATGCTCTACGAGCTATTCTCTTCCATCGGCCAGGTCGCCTCTATCCGT
GTCTGCCGTGATGCCGTCACCCGCCGGTCCTTGGGCTACGCCTACGTCAACTACAACAACACCGCTGACGGCGAG
CGTGCTCTTGAGGATCTGAACTACACTCTCATCAAGGGAAAGCCTTGCCGCATCATGTGGTCCCAGCGTGACCCC
GCTCTGCGCAAGACTGGCCAGGGCAACGTGTTCATCAAGAACCTTGACAACGCCATTGACAACAAGGCTCTCCAC
GACACCTTCGCTGCCTTCGGCAACATTCTCAGCTGCAAGGTCGCCCAGGATGAGTTCGCCAACTCCAAGGGCTAC
GGTTTCGTCCACTACGAGACCGCCGAAGCCGCCAACAACGCCATCAAGCACGTTAACGGTATGCTGCTGAATGAC
AAGAAGGTCTTCGTCGGACACCACATCTCCAAGAAGGACCGCCAAAGCAAGTTCGAGGAGATGAAGGCCAACTTC
ACCAACATCTACATCAAGAACATCGATCTCGAGATTACCGACGACGAGTTCCGCGTCATGTTCGAGGCCTTTGGT
GAGATCACCTCCGCCACCCTCAGCCACGACCAGGATGGCAAGAGCCGCGGTTTCGGCTTTGTTAACTACGCCAAC
CACGAGAGCGCCGAGGCCGCTGTGGCTGAGATGAACGAGAAGGACGTCAAGACTCAGAAGCTTTACGTTGGCCGT
GCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCATGGAGAAGGCCTCCAAG
TACCAGGGTGTCAACCTCTACGTTAAGAACTTGACCGACGACATTGATGATGAGAAGCTCCGTGACCTCTTCACT
CCTTACGGTACTATCACTTCCGCCAAGGTTATGCGTGATGCCGCCGAACGTTCTCCCTCCCCCGAGGCCGAGGAG
AAGGAGGCCGACAAGGAGACCAAGGACTCCGAGGAGAAGGAGGTGAAGACCGAGGAGAGCACCGAGGCGAAGACT
GAGGAGCCTACCGAGGAGAAGAAGACCGAGGAGGAGGGCGAGGACACCGAGGAGAAGAAGACAGAGAAGAAGGCC
TTCGGTAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAGGCTGTCACCGAGATG
AACCAGCGTATGGTCAACGCCAAGCCCCTCTACGTTGCTCTCGCTCAGCGCAAGGATGTCCGCCGCAGCCAGCTC
GAGGCTAGCATCCAGGCTCGCAACACTATCCGCCAGCAGCAGGCCGCAGCCGCTGCCGGTATGCCCCAGCCTGTA
AGTTGCAACTTTCCTGTTCAGCCCGCTCAATTACTAACTTGACTAGTTCATGCAGCCCGCCGTCTTCTACGGTGC
TGGCCAGCAGGGCTTCATGCCCCCTGGACAGCGTGGTGGTATGCCATTCGCCCCCCAGGGCGGTATGCCCATGCC
TAACATGCCCGCTGGACGTCCCCAGTACCCCGGTCCCTTCCCCCAAGGTGGTCGTGGTATGCCCCCCAACCAACA
GCTTCCTCCCAACTTCCAGGGTATGCCTATGGGCATGCAGGCCCCTGGTGGCATTCCTAACGGCATGGGCTACCC
TATGCCCCAGGCTTTCGGACGTGGCGGCGGTGGCCGTGGTGTTCCCGGTATGCCCATGAACATGCGTGGTGGCCC
CGGTTTCGGCCGTGGTGGTCCTCAGATGGGTCGTGGTGGTGGTCGCGGCCAGCCCGCCCCTGGTGGTCAGCCCGC
TGGTGGCGAGCCCGCCTCTGCCAACCAGGCTCTTCTCACCGCTCCCCCCGCTCAGCAGAAGCAGATGCTCGGCGA
GGCTCTTTACCCCAAGATCCAGGCTCAGCAGCCCGAGCTTGCTGGCAAGATCACTGGTATGCTTCTTGAGATGGA
TAACGCTGAGTTGCTTGGCCTGTAAGTTACACTGCCCATTTTTTTGAGTTATGTGTGACAAGATTTACTAACATT
CTTCCAGGCTCGATGATGAGGAGGCTCTCCGCGGCAAGGTCGATGAGGCCCTTAACGTCTATGATGAGTACATGA
AGAACAAGGGTGATGGCGAGACCACCGAACCCAAGCCCCAGGAAGCCGCCAAGGAGGCCCCTGTTGAGGAGAACA
AGTCTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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