Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g3540.t1
Gene name
Locationscaffold_03:1916891..1918633
Strand+
Gene length (bp)1742
Transcript length (bp)1539
Coding sequence length (bp)1539
Protein length (aa) 513

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10281 Ish1 Putative nuclear envelope organisation protein 1.3E-06 30 65
PF10281 Ish1 Putative nuclear envelope organisation protein 2.4E-12 93 128
PF10281 Ish1 Putative nuclear envelope organisation protein 3.1E-11 151 183
PF10281 Ish1 Putative nuclear envelope organisation protein 2.1E-13 214 249
PF10281 Ish1 Putative nuclear envelope organisation protein 1.8E-09 299 333
PF10281 Ish1 Putative nuclear envelope organisation protein 2.0E-11 414 449

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g3540.t1
MKLNLATGLICLLASTEVVAASSWWNKALYNKWHETELERWLSDHNIPYPSPADRRDLENLVKTNWDSRVQTPLG
QAVDNVNHELHHAREWIFDSWSDSQLKAFLDRHGIPAPQPRRHDLLVKTARENYEKIATKVGQTAAYPGDWLYAE
WSDSDLKEWLDERGWPVPQPSERDKLIASVRRNSRIFSLQTQSIAASASAEAEAVKETLSNQLFNAWSDSKLKEF
LDEHNVKVPQGSKRNELIALARKNRHYLSDQVSSASSAVEGAFGAATTKAGNEYAQATDYAKLKIDDAFETALNG
WSDSRLKAFLDARSVPVPQNGKRDELIAKVRANAHKAAGGWNQYNFDTWDKEHLVNYLSSVNHKAIKQADASREQ
LVKSAQDSYAKASKAGGEQYASATSSIAHATDTAKDATFDQWSHSELKEYLDDYGVPTYQGSSINELRAAARRNA
HYYKYGTASPQATIYAKVMSVLQWFADQLKIGAASGRAQGTEAAEKVQKKVSEHTERLREEL*
Coding >Pro_DTO070G2_2|g3540.t1
ATGAAGTTGAATTTGGCCACTGGCCTCATCTGCTTGCTCGCTTCCACTGAAGTAGTGGCAGCTTCTAGCTGGTGG
AACAAGGCTCTCTACAACAAATGGCATGAAACTGAGCTCGAGCGATGGCTCTCCGACCATAATATTCCCTACCCC
AGTCCTGCCGATCGCCGCGATCTGGAGAACCTCGTCAAGACCAACTGGGACAGCAGAGTGCAAACACCCCTTGGA
CAAGCTGTCGACAACGTCAATCATGAGCTACACCATGCCAGAGAATGGATTTTTGATAGTTGGTCTGACTCTCAG
TTGAAGGCATTCCTCGATCGCCACGGCATCCCTGCCCCCCAGCCCCGCAGACACGACCTTCTAGTCAAAACCGCG
CGTGAGAACTATGAGAAGATCGCTACCAAGGTTGGCCAAACGGCTGCCTACCCCGGAGACTGGCTTTATGCGGAG
TGGTCCGACTCGGATCTCAAGGAATGGCTCGACGAGCGTGGATGGCCGGTGCCTCAGCCTTCCGAGCGTGACAAG
CTCATTGCCTCGGTTCGCCGCAACTCGCGCATTTTCAGCCTGCAGACCCAGAGCATTGCTGCATCTGCATCCGCT
GAGGCTGAGGCTGTTAAGGAGACACTGAGTAATCAGCTTTTCAATGCCTGGTCCGACTCGAAGCTGAAGGAATTC
CTTGACGAGCACAATGTCAAGGTGCCTCAGGGCTCGAAGCGCAATGAACTCATTGCTCTGGCTCGGAAGAACCGT
CACTACCTTTCTGACCAGGTGTCGAGTGCCTCCTCCGCTGTAGAGGGTGCGTTTGGCGCTGCTACCACCAAGGCT
GGGAACGAATATGCACAGGCTACCGATTATGCCAAGCTGAAGATCGACGATGCTTTCGAGACTGCGTTGAATGGC
TGGTCTGACTCCCGCTTGAAGGCGTTCCTTGATGCTCGAAGCGTCCCTGTCCCTCAGAATGGTAAGCGTGATGAA
CTTATTGCCAAGGTCCGCGCCAATGCGCACAAGGCTGCTGGAGGATGGAACCAGTACAACTTTGATACTTGGGAT
AAAGAACACCTGGTGAACTACTTGTCGTCCGTGAACCACAAGGCGATTAAGCAGGCCGATGCCTCACGCGAACAG
CTTGTGAAGAGTGCCCAGGACTCCTACGCCAAGGCTTCCAAGGCTGGCGGCGAACAGTACGCCTCTGCGACTTCT
TCCATCGCGCATGCAACAGACACAGCCAAGGATGCTACTTTCGACCAATGGTCGCACTCCGAGCTCAAGGAATAC
CTGGACGACTACGGTGTTCCGACATACCAGGGCTCGAGCATCAATGAACTTCGAGCTGCGGCCCGGCGCAACGCC
CATTACTATAAGTACGGCACTGCGAGCCCGCAAGCTACGATCTACGCCAAGGTCATGAGTGTTTTGCAGTGGTTT
GCCGATCAGTTAAAGATCGGCGCTGCTAGCGGCCGCGCCCAAGGCACCGAAGCTGCTGAAAAGGTCCAGAAGAAG
GTTTCCGAGCACACGGAGAGATTGCGTGAAGAACTTTGA
Transcript >Pro_DTO070G2_2|g3540.t1
ATGAAGTTGAATTTGGCCACTGGCCTCATCTGCTTGCTCGCTTCCACTGAAGTAGTGGCAGCTTCTAGCTGGTGG
AACAAGGCTCTCTACAACAAATGGCATGAAACTGAGCTCGAGCGATGGCTCTCCGACCATAATATTCCCTACCCC
AGTCCTGCCGATCGCCGCGATCTGGAGAACCTCGTCAAGACCAACTGGGACAGCAGAGTGCAAACACCCCTTGGA
CAAGCTGTCGACAACGTCAATCATGAGCTACACCATGCCAGAGAATGGATTTTTGATAGTTGGTCTGACTCTCAG
TTGAAGGCATTCCTCGATCGCCACGGCATCCCTGCCCCCCAGCCCCGCAGACACGACCTTCTAGTCAAAACCGCG
CGTGAGAACTATGAGAAGATCGCTACCAAGGTTGGCCAAACGGCTGCCTACCCCGGAGACTGGCTTTATGCGGAG
TGGTCCGACTCGGATCTCAAGGAATGGCTCGACGAGCGTGGATGGCCGGTGCCTCAGCCTTCCGAGCGTGACAAG
CTCATTGCCTCGGTTCGCCGCAACTCGCGCATTTTCAGCCTGCAGACCCAGAGCATTGCTGCATCTGCATCCGCT
GAGGCTGAGGCTGTTAAGGAGACACTGAGTAATCAGCTTTTCAATGCCTGGTCCGACTCGAAGCTGAAGGAATTC
CTTGACGAGCACAATGTCAAGGTGCCTCAGGGCTCGAAGCGCAATGAACTCATTGCTCTGGCTCGGAAGAACCGT
CACTACCTTTCTGACCAGGTGTCGAGTGCCTCCTCCGCTGTAGAGGGTGCGTTTGGCGCTGCTACCACCAAGGCT
GGGAACGAATATGCACAGGCTACCGATTATGCCAAGCTGAAGATCGACGATGCTTTCGAGACTGCGTTGAATGGC
TGGTCTGACTCCCGCTTGAAGGCGTTCCTTGATGCTCGAAGCGTCCCTGTCCCTCAGAATGGTAAGCGTGATGAA
CTTATTGCCAAGGTCCGCGCCAATGCGCACAAGGCTGCTGGAGGATGGAACCAGTACAACTTTGATACTTGGGAT
AAAGAACACCTGGTGAACTACTTGTCGTCCGTGAACCACAAGGCGATTAAGCAGGCCGATGCCTCACGCGAACAG
CTTGTGAAGAGTGCCCAGGACTCCTACGCCAAGGCTTCCAAGGCTGGCGGCGAACAGTACGCCTCTGCGACTTCT
TCCATCGCGCATGCAACAGACACAGCCAAGGATGCTACTTTCGACCAATGGTCGCACTCCGAGCTCAAGGAATAC
CTGGACGACTACGGTGTTCCGACATACCAGGGCTCGAGCATCAATGAACTTCGAGCTGCGGCCCGGCGCAACGCC
CATTACTATAAGTACGGCACTGCGAGCCCGCAAGCTACGATCTACGCCAAGGTCATGAGTGTTTTGCAGTGGTTT
GCCGATCAGTTAAAGATCGGCGCTGCTAGCGGCCGCGCCCAAGGCACCGAAGCTGCTGAAAAGGTCCAGAAGAAG
GTTTCCGAGCACACGGAGAGATTGCGTGAAGAACTTTGA
Gene >Pro_DTO070G2_2|g3540.t1
ATGAAGTTGAATTTGGCCACTGGCCTCATCTGCTTGCTCGCTTCCACTGAAGTAGTGGCAGCTTCTAGCTGGTGG
AACAAGGCTCGTATGTTGTCTTGGGTACAACTATACCCTTCGCAAGCTAATATCATCAACAGTCTACAACAAATG
GCATGAAACTGAGCTCGAGCGATGGCTCTCCGACCATAGTATGGAGCACTTCTCTGTCTAGCAGCTTCAATTACT
CACAATTCACACAGATATTCCCTACCCCAGTCCTGCCGATCGCCGCGATCTGGAGAACCTCGTCAAGACCAACTG
GGACAGCAGAGTGCAAACACCCCTTGGACAAGCTGTCGACAACGTCAATCATGAGCTACACCATGCCAGAGAATG
GATTTTTGATAGGTAGGGTGCTTACCTTTCCTTGTTGTGAATGATAGCTAACCAGTATAGTTGGTCTGACTCTCA
GTTGAAGGCATTCCTCGATCGCCACGGCATCCCTGCCCCCCAGCCCCGCAGACACGACCTTCTAGTCAAAACCGC
GCGTGAGAACTATGAGAAGATCGCTACCAAGGTTGGCCAAACGGCTGCCTACCCCGGAGACTGGCTTTATGCGGA
GTGGTCCGACTCGGATCTCAAGGAATGGCTCGACGAGCGTGGATGGCCGGTGCCTCAGCCTTCCGAGCGTGACAA
GCTCATTGCCTCGGTTCGCCGCAACTCGCGCATTTTCAGCCTGCAGACCCAGAGCATTGCTGCATCTGCATCCGC
TGAGGCTGAGGCTGTTAAGGAGACACTGAGTAATCAGCTTTTCAATGCCTGGTCCGACTCGAAGCTGAAGGAATT
CCTTGACGAGCACAATGTCAAGGTGCCTCAGGGCTCGAAGCGCAATGAACTCATTGCTCTGGCTCGGAAGAACCG
TCACTACCTTTCTGACCAGGTGTCGAGTGCCTCCTCCGCTGTAGAGGGTGCGTTTGGCGCTGCTACCACCAAGGC
TGGGAACGAATATGCACAGGCTACCGATTATGCCAAGCTGAAGATCGACGATGCTTTCGAGACTGCGTTGAATGG
CTGGTCTGACTCCCGCTTGAAGGCGTTCCTTGATGCTCGAAGCGTCCCTGTCCCTCAGAATGGTAAGCGTGATGA
ACTTATTGCCAAGGTCCGCGCCAATGCGCACAAGGCTGCTGGAGGATGGAACCAGTACAACTTTGATACTTGGGA
TAAAGAACACCTGGTGTAAGTACATACTTGTCTGCTGGTTATGATCTCACTGGCTTACCTTTCCTAGGAACTACT
TGTCGTCCGTGAACCACAAGGCGATTAAGCAGGCCGATGCCTCACGCGAACAGCTTGTGAAGAGTGCCCAGGACT
CCTACGCCAAGGCTTCCAAGGCTGGCGGCGAACAGTACGCCTCTGCGACTTCTTCCATCGCGCATGCAACAGACA
CAGCCAAGGATGCTACTTTCGACCAATGGTCGCACTCCGAGCTCAAGGAATACCTGGACGACTACGGTGTTCCGA
CATACCAGGGCTCGAGCATCAATGAACTTCGAGCTGCGGCCCGGCGCAACGCCCATTACTATAAGTACGGCACTG
CGAGCCCGCAAGCTACGATCTACGCCAAGGTCATGAGTGTTTTGCAGTGGTTTGCCGATCAGTTAAAGATCGGCG
CTGCTAGCGGCCGCGCCCAAGGCACCGAAGCTGCTGAAAAGGTCCAGAAGAAGGTTTCCGAGCACACGGAGAGAT
TGCGTGAAGAACTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail