Protein ID | Pro_DTO070G2_2|g2990.t1 |
Gene name | |
Location | scaffold_03:507760..509412 |
Strand | + |
Gene length (bp) | 1652 |
Transcript length (bp) | 1410 |
Coding sequence length (bp) | 1410 |
Protein length (aa) | 470 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10355 | Ytp1 | Protein of unknown function (Ytp1) | 3.7E-70 | 154 | 393 |
PF10348 | DUF2427 | Domain of unknown function (DUF2427) | 1.8E-32 | 28 | 126 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 24 | 17 |
2 | 44 | 66 | 22 |
3 | 71 | 88 | 17 |
4 | 103 | 125 | 22 |
5 | 137 | 159 | 22 |
6 | 179 | 201 | 22 |
7 | 274 | 296 | 22 |
8 | 300 | 322 | 22 |
9 | 334 | 353 | 19 |
10 | 368 | 390 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g2990.t1 MAYLRQSLWTLFVLVASALAHGGHEAVPEGESISQDPIDATLWTHMILMGLAFGLIFPTGMVLGIIRSRWHVPVQ VVGTVIAVLAYFLGHAHKGRQFDKNLHASVANWLMLLLVAQVVLGVYLKLHLEKAGQARIRWIFVLAHGIVGKAM PVLSWAQMLFGGIAALGFCRDDHLGQCLAHFIMGSAFIAYGICLTILLLVGQYWLRRTGRSQEFFDSLIIAAWGC VNTFTEHRWGSAWVHNDLQHTTMGIIWWCAGLLGMWLSRTRSGRPKRNLIPAIVILITGYAMSAHPQQLMISTMV HTIFGYTLMAAGLTRIIEISFILRDKPALSEPNSFQYLTPFLLYASGFLFMGATEEQMLLLNNAGVTHVAYVLVL YSIAFILFLFVNILLHLYAVHAWPNSESTNQDGPMYSTLNGNANVNGRARSNSQQIQDAEAFELHGLISDDDEGP SMGPRKNSDEELGKEEAHR* |
Coding | >Pro_DTO070G2_2|g2990.t1 ATGGCATATCTCCGTCAGTCCTTATGGACTTTATTTGTATTAGTGGCCTCGGCTCTCGCCCATGGCGGCCACGAG GCTGTTCCTGAGGGCGAATCTATCTCCCAGGATCCTATCGATGCAACACTATGGACTCATATGATTCTCATGGGT TTGGCATTTGGCCTAATCTTCCCAACGGGAATGGTTCTCGGAATCATCCGTTCCCGCTGGCACGTCCCCGTCCAA GTCGTCGGCACCGTCATCGCCGTACTAGCTTACTTCCTCGGCCACGCCCACAAAGGCCGCCAATTCGACAAGAAC CTGCACGCCTCCGTCGCAAACTGGCTGATGCTATTGCTGGTCGCGCAAGTTGTCCTCGGAGTATATCTCAAACTG CACCTGGAGAAGGCGGGCCAGGCCCGCATCCGATGGATCTTCGTGCTGGCCCACGGCATCGTCGGCAAGGCCATG CCCGTCCTCAGCTGGGCGCAAATGCTCTTCGGTGGCATTGCCGCGCTCGGCTTCTGCCGCGATGACCATCTCGGC CAGTGTCTGGCCCATTTCATTATGGGCTCCGCCTTCATCGCGTACGGTATCTGTTTGACCATCCTCTTGCTGGTC GGCCAGTATTGGTTGCGCCGGACCGGCCGCAGCCAGGAATTCTTCGATTCCCTCATCATCGCCGCTTGGGGCTGT GTCAATACTTTTACCGAACACCGCTGGGGTTCCGCTTGGGTGCACAATGACCTCCAGCATACTACTATGGGCATT ATCTGGTGGTGTGCTGGTCTGCTGGGTATGTGGCTCAGCCGTACTCGCAGCGGACGTCCTAAGCGTAACCTCATT CCGGCTATTGTCATCTTGATTACCGGATATGCTATGTCGGCGCATCCCCAGCAGCTGATGATCAGTACCATGGTC CACACTATCTTCGGGTACACCCTGATGGCGGCGGGTCTGACGCGCATTATTGAGATCTCGTTCATTCTGAGGGAT AAGCCTGCTCTCTCCGAGCCGAACAGCTTCCAATACCTAACTCCTTTCTTGCTATATGCCTCTGGCTTCCTCTTT ATGGGCGCCACCGAGGAGCAGATGCTCCTGCTAAACAACGCAGGCGTCACCCACGTGGCGTACGTGTTGGTCCTC TACAGCATTGCCTTCATCCTCTTCCTCTTCGTCAACATCCTGCTCCACCTCTACGCTGTCCACGCCTGGCCCAAC TCCGAGTCCACCAATCAGGACGGCCCCATGTACTCCACTCTCAACGGGAACGCGAATGTGAATGGCCGTGCACGC TCAAACTCGCAGCAGATCCAAGATGCCGAGGCATTCGAGCTCCATGGTTTGATTTCCGATGATGATGAGGGCCCT TCCATGGGACCGCGGAAGAATAGCGATGAGGAACTTGGAAAAGAAGAGGCCCATCGCTGA |
Transcript | >Pro_DTO070G2_2|g2990.t1 ATGGCATATCTCCGTCAGTCCTTATGGACTTTATTTGTATTAGTGGCCTCGGCTCTCGCCCATGGCGGCCACGAG GCTGTTCCTGAGGGCGAATCTATCTCCCAGGATCCTATCGATGCAACACTATGGACTCATATGATTCTCATGGGT TTGGCATTTGGCCTAATCTTCCCAACGGGAATGGTTCTCGGAATCATCCGTTCCCGCTGGCACGTCCCCGTCCAA GTCGTCGGCACCGTCATCGCCGTACTAGCTTACTTCCTCGGCCACGCCCACAAAGGCCGCCAATTCGACAAGAAC CTGCACGCCTCCGTCGCAAACTGGCTGATGCTATTGCTGGTCGCGCAAGTTGTCCTCGGAGTATATCTCAAACTG CACCTGGAGAAGGCGGGCCAGGCCCGCATCCGATGGATCTTCGTGCTGGCCCACGGCATCGTCGGCAAGGCCATG CCCGTCCTCAGCTGGGCGCAAATGCTCTTCGGTGGCATTGCCGCGCTCGGCTTCTGCCGCGATGACCATCTCGGC CAGTGTCTGGCCCATTTCATTATGGGCTCCGCCTTCATCGCGTACGGTATCTGTTTGACCATCCTCTTGCTGGTC GGCCAGTATTGGTTGCGCCGGACCGGCCGCAGCCAGGAATTCTTCGATTCCCTCATCATCGCCGCTTGGGGCTGT GTCAATACTTTTACCGAACACCGCTGGGGTTCCGCTTGGGTGCACAATGACCTCCAGCATACTACTATGGGCATT ATCTGGTGGTGTGCTGGTCTGCTGGGTATGTGGCTCAGCCGTACTCGCAGCGGACGTCCTAAGCGTAACCTCATT CCGGCTATTGTCATCTTGATTACCGGATATGCTATGTCGGCGCATCCCCAGCAGCTGATGATCAGTACCATGGTC CACACTATCTTCGGGTACACCCTGATGGCGGCGGGTCTGACGCGCATTATTGAGATCTCGTTCATTCTGAGGGAT AAGCCTGCTCTCTCCGAGCCGAACAGCTTCCAATACCTAACTCCTTTCTTGCTATATGCCTCTGGCTTCCTCTTT ATGGGCGCCACCGAGGAGCAGATGCTCCTGCTAAACAACGCAGGCGTCACCCACGTGGCGTACGTGTTGGTCCTC TACAGCATTGCCTTCATCCTCTTCCTCTTCGTCAACATCCTGCTCCACCTCTACGCTGTCCACGCCTGGCCCAAC TCCGAGTCCACCAATCAGGACGGCCCCATGTACTCCACTCTCAACGGGAACGCGAATGTGAATGGCCGTGCACGC TCAAACTCGCAGCAGATCCAAGATGCCGAGGCATTCGAGCTCCATGGTTTGATTTCCGATGATGATGAGGGCCCT TCCATGGGACCGCGGAAGAATAGCGATGAGGAACTTGGAAAAGAAGAGGCCCATCGCTGA |
Gene | >Pro_DTO070G2_2|g2990.t1 ATGGCATATCTCCGTCAGTCCTTATGGACTTTATTTGTATTAGTGGCCTCGGCTCTCGCCCATGGCGGCCACGAG GCTGTTCCTGAGGGCGAATCTATCTCCCAGGATCCTATCGTACGTCCTACTACGCCATTCCCCTCGGCAAAAGTT AACACATGATTCCAGGATGCAACACTATGGACTCATATGATTCTCATGGGTTTGGCATTTGGCCTAATCTTCCCA ACGGGAATGGTTCTCGGAGTATGTACCGCTTCACTGACCTCTCCGTTTCCTTCCTACCGTCACGTCACGTCCCAT CTCTAACAAAAGAAAATAGATCATCCGTTCCCGCTGGCACGTCCCCGTCCAAGTCGTCGGCACCGTCATCGCCGT ACTAGCTTACTTCCTCGGCCACGCCCACAAAGGCCGCCAATTCGACAAGAACCTGCACGCCTCCGTCGCAAACTG GCTGATGCTATTGCTGGTCGCGCAAGTTGTCCTCGGAGTATATCTCAAACTGCACCTGGAGAAGGCGGGCCAGGC CCGCATCCGATGGATCTTCGTGCTGGCCCACGGCATCGTCGGCAAGGCCATGCCCGTCCTCAGCTGGGCGCAAAT GCTCTTCGGTGGCATTGCCGCGCTCGGCTTCTGCCGCGATGACCATCTCGGCCAGTGTCTGGCCCATTTCATTAT GGGCTCCGCCTTCATCGCGTACGGTATCTGTTTGACCATCCTCTTGCTGGTCGGCCAGTATTGGTTGCGCCGGAC CGGCCGCAGCCAGGAATTCTTCGATTCCCTCATCATCGCCGCTTGGGGCTGTGTCAATACTTTTACCGAACACCG CTGGGGTTCCGCTTGGGTGCACAATGACCTCCAGCATACTACTATGGGCATTATCTGGTGGTGTGCTGGTCTGCT GGGTATGTGGCTCAGCCGTACTCGCAGCGGACGTCCTAAGCGTAACCTCATTCCGGCTATTGTCATCTTGATTAC CGGATATGCTATGTCGGCGCATCCCCAGCAGCTGATGATCAGTACCATGGTCCACACTATCTTCGGGTACACCCT GATGGCGGCGGGTCTGACGCGCATTATTGAGATCTCGTTCATTCTGAGGGATAAGCCTGCTCTCTCCGAGCCGAA CAGCTTCCAATACCTAACTCCTTTCGTATGTATACTCTCCGGTTGATGTGGTATATAGGATGATACTGACTCTTT TCTCTTTCAGTTGCTATATGCCTCTGGCTTCCTCTTTATGGGCGCCACCGAGGAGCAGATGCTCCTGCTAAACAA CGCAGGCGTCACCCACGTGGCGTACGTGTTGGTCCTCTACAGCATTGCCTTCATCCTCTTCCTCTGTAAGTTGAT TCCCTGCTTTCTTCTTCTAGAACAATCACTCATCCTTCCCTTCAGTCGTCAACATCCTGCTCCACCTCTACGCTG TCCACGCCTGGCCCAACTCCGAGTCCACCAATCAGGACGGCCCCATGTACTCCACTCTCAACGGGAACGCGAATG TGAATGGCCGTGCACGCTCAAACTCGCAGCAGATCCAAGATGCCGAGGCATTCGAGCTCCATGGTTTGATTTCCG ATGATGATGAGGGCCCTTCCATGGGACCGCGGAAGAATAGCGATGAGGAACTTGGAAAAGAAGAGGCCCATCGCT GA |