Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g2793.t1
Gene name
Locationscaffold_02:2786701..2788974
Strand+
Gene length (bp)2273
Transcript length (bp)1776
Coding sequence length (bp)1776
Protein length (aa) 592

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16275 SF1-HH Splicing factor 1 helix-hairpin domain 1.1E-42 74 183
PF00098 zf-CCHC Zinc knuckle 2.3E-05 307 323
PF00098 zf-CCHC Zinc knuckle 1.4E-05 332 347

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003676 nucleic acid binding Yes
GO:0005488 binding No
GO:0043169 cation binding No
GO:1901363 heterocyclic compound binding No
GO:0046914 transition metal ion binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Zinc finger, CCHC-type

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g2793.t1
MAWRNQGITGSNNIPLGRRRMGGEDGEEESRTVTPSSIPSSSMGPDGPKRGRSPVRADPAPLNTDGDGKRRKKRN
RWGDQQENKAAGLMGLPTMIMANFTSEQLEAYTLHLRIEEISQKLRINDVVPADGDRSPSPPPQYDNFGRRVNTR
EYRYRKRLEDERHKLVEKAIKTIPNYNPPSDYRRPTKTQEKVYVPVNDYPEINFRPRGNTLKKMETESGAKIAIR
GKGSVKEGKGRSDAAHGSNQEEDLHCLIMADTEEKVNKAKKLVHNVIETAASIPEGQNELKRNQLRELAALNGTL
RDDENQACQNCGQIGHRKYDCPEQRNFTANIICRVCGNAGHMARDCPDRQRGSDWRNAGGPRGDRAVGTGDAVDR
EMEQLMNELSGGAPGEYEPRRIEAGPDGGNGRPDDRDVKPWQQRGPPPQSDVAPWQQRRDPRPRDDYGSRDNYGS
RDNHGPRDDYGSRNQGGPAPWAAQAQPQGPPQTRDYAYGSQGGYAAPGVAPGAAPWQQPAPPGGQQPAYGGGYGG
YGYAAYPPGMGAPGAAPPGMGAPPPPPGMAPMYPGGAGSPPPPPPPGDAPPPPPPSDLPPPPPPPQ*
Coding >Pro_DTO070G2_2|g2793.t1
ATGGCTTGGCGCAACCAGGGAATAACTGGCTCCAACAATATCCCGCTTGGCCGGCGACGCATGGGCGGCGAGGAT
GGAGAGGAGGAAAGTCGCACTGTGACCCCTTCTTCTATCCCCTCTTCGTCTATGGGTCCCGATGGTCCAAAGCGT
GGGCGTAGCCCTGTTCGAGCCGATCCAGCTCCCTTGAACACCGATGGCGATGGCAAGAGGCGCAAGAAGCGCAAC
CGCTGGGGTGACCAACAAGAGAATAAGGCTGCCGGTCTTATGGGCCTGCCAACTATGATCATGGCGAACTTCACC
AGCGAGCAGCTTGAAGCTTATACGCTTCACCTTCGTATTGAGGAAATCAGCCAGAAGCTTCGAATCAACGACGTG
GTCCCCGCCGATGGTGACAGATCTCCCTCGCCACCTCCCCAGTACGACAACTTCGGAAGACGTGTGAACACTCGC
GAGTACCGTTATCGCAAGCGTCTTGAGGACGAACGTCATAAACTGGTCGAGAAGGCCATCAAGACCATCCCTAAC
TACAACCCGCCTTCTGACTACAGACGCCCCACCAAGACCCAGGAGAAGGTCTACGTCCCCGTGAATGACTATCCA
GAGATTAACTTCAGACCTCGTGGAAACACCTTGAAAAAGATGGAGACCGAGTCCGGTGCCAAGATTGCCATTCGA
GGCAAAGGCTCCGTCAAAGAAGGAAAGGGTCGGTCTGACGCCGCTCACGGTAGCAACCAGGAAGAAGACCTGCAC
TGTCTGATTATGGCGGACACCGAAGAAAAGGTTAACAAGGCCAAGAAGCTTGTCCACAATGTCATTGAAACAGCC
GCATCCATCCCTGAAGGCCAGAACGAGCTCAAGCGCAACCAACTTCGTGAGCTGGCTGCTCTTAACGGTACCCTT
CGTGACGATGAGAACCAGGCTTGCCAGAACTGTGGTCAAATTGGACACCGTAAGTATGACTGCCCCGAGCAGCGT
AACTTCACTGCGAATATCATCTGTCGTGTCTGTGGCAATGCTGGCCATATGGCTCGTGATTGTCCCGACCGCCAG
AGAGGCAGTGACTGGCGTAACGCCGGCGGCCCACGTGGCGATCGTGCTGTTGGCACTGGTGATGCCGTGGATCGC
GAGATGGAGCAACTGATGAATGAATTGTCTGGTGGTGCTCCTGGCGAATACGAGCCCCGTCGCATTGAAGCCGGT
CCCGACGGTGGCAATGGCCGTCCCGACGACCGTGATGTGAAGCCCTGGCAGCAGCGTGGACCGCCGCCCCAAAGC
GATGTGGCTCCATGGCAACAGCGCCGAGACCCTCGCCCTCGTGACGACTACGGATCCCGCGATAACTATGGATCC
CGCGACAATCACGGACCTCGTGACGACTATGGATCTCGCAACCAGGGTGGTCCTGCCCCTTGGGCTGCGCAGGCC
CAACCCCAAGGTCCACCCCAAACCCGCGACTACGCTTACGGATCTCAAGGTGGTTATGCTGCTCCTGGTGTTGCT
CCGGGTGCTGCTCCTTGGCAGCAACCGGCCCCTCCTGGCGGACAGCAGCCTGCCTATGGTGGTGGTTATGGTGGA
TACGGATATGCGGCTTATCCTCCTGGCATGGGAGCTCCTGGTGCTGCCCCCCCTGGTATGGGCGCACCTCCTCCC
CCTCCTGGTATGGCTCCAATGTACCCCGGAGGTGCTGGCAGTCCTCCTCCTCCGCCCCCGCCTGGCGATGCTCCG
CCTCCACCACCTCCAAGCGACCTGCCTCCCCCACCCCCACCCCCACAGTGA
Transcript >Pro_DTO070G2_2|g2793.t1
ATGGCTTGGCGCAACCAGGGAATAACTGGCTCCAACAATATCCCGCTTGGCCGGCGACGCATGGGCGGCGAGGAT
GGAGAGGAGGAAAGTCGCACTGTGACCCCTTCTTCTATCCCCTCTTCGTCTATGGGTCCCGATGGTCCAAAGCGT
GGGCGTAGCCCTGTTCGAGCCGATCCAGCTCCCTTGAACACCGATGGCGATGGCAAGAGGCGCAAGAAGCGCAAC
CGCTGGGGTGACCAACAAGAGAATAAGGCTGCCGGTCTTATGGGCCTGCCAACTATGATCATGGCGAACTTCACC
AGCGAGCAGCTTGAAGCTTATACGCTTCACCTTCGTATTGAGGAAATCAGCCAGAAGCTTCGAATCAACGACGTG
GTCCCCGCCGATGGTGACAGATCTCCCTCGCCACCTCCCCAGTACGACAACTTCGGAAGACGTGTGAACACTCGC
GAGTACCGTTATCGCAAGCGTCTTGAGGACGAACGTCATAAACTGGTCGAGAAGGCCATCAAGACCATCCCTAAC
TACAACCCGCCTTCTGACTACAGACGCCCCACCAAGACCCAGGAGAAGGTCTACGTCCCCGTGAATGACTATCCA
GAGATTAACTTCAGACCTCGTGGAAACACCTTGAAAAAGATGGAGACCGAGTCCGGTGCCAAGATTGCCATTCGA
GGCAAAGGCTCCGTCAAAGAAGGAAAGGGTCGGTCTGACGCCGCTCACGGTAGCAACCAGGAAGAAGACCTGCAC
TGTCTGATTATGGCGGACACCGAAGAAAAGGTTAACAAGGCCAAGAAGCTTGTCCACAATGTCATTGAAACAGCC
GCATCCATCCCTGAAGGCCAGAACGAGCTCAAGCGCAACCAACTTCGTGAGCTGGCTGCTCTTAACGGTACCCTT
CGTGACGATGAGAACCAGGCTTGCCAGAACTGTGGTCAAATTGGACACCGTAAGTATGACTGCCCCGAGCAGCGT
AACTTCACTGCGAATATCATCTGTCGTGTCTGTGGCAATGCTGGCCATATGGCTCGTGATTGTCCCGACCGCCAG
AGAGGCAGTGACTGGCGTAACGCCGGCGGCCCACGTGGCGATCGTGCTGTTGGCACTGGTGATGCCGTGGATCGC
GAGATGGAGCAACTGATGAATGAATTGTCTGGTGGTGCTCCTGGCGAATACGAGCCCCGTCGCATTGAAGCCGGT
CCCGACGGTGGCAATGGCCGTCCCGACGACCGTGATGTGAAGCCCTGGCAGCAGCGTGGACCGCCGCCCCAAAGC
GATGTGGCTCCATGGCAACAGCGCCGAGACCCTCGCCCTCGTGACGACTACGGATCCCGCGATAACTATGGATCC
CGCGACAATCACGGACCTCGTGACGACTATGGATCTCGCAACCAGGGTGGTCCTGCCCCTTGGGCTGCGCAGGCC
CAACCCCAAGGTCCACCCCAAACCCGCGACTACGCTTACGGATCTCAAGGTGGTTATGCTGCTCCTGGTGTTGCT
CCGGGTGCTGCTCCTTGGCAGCAACCGGCCCCTCCTGGCGGACAGCAGCCTGCCTATGGTGGTGGTTATGGTGGA
TACGGATATGCGGCTTATCCTCCTGGCATGGGAGCTCCTGGTGCTGCCCCCCCTGGTATGGGCGCACCTCCTCCC
CCTCCTGGTATGGCTCCAATGTACCCCGGAGGTGCTGGCAGTCCTCCTCCTCCGCCCCCGCCTGGCGATGCTCCG
CCTCCACCACCTCCAAGCGACCTGCCTCCCCCACCCCCACCCCCACAGTGA
Gene >Pro_DTO070G2_2|g2793.t1
ATGGCTTGGCGCAACCAGGGAATAACTGGCTCCAACAATATCCCGCTTGGCCGGCGACGCATGGGCGGCGAGGAT
GGAGAGGAGGAAAGTCGCACTGTGACCCCTTCTTCTATCCCCTCTTCGTCTATGGGTCCCGATGGTCCAAAGCGT
GGGCGTAGCCCTGTTCGAGGTACGTTTCTTCTAAACTCAAAGGTGAAAACAAAATCAAGACTGACCTTGCTTCAA
AGCCGATCCAGCTCCCTTGAACACCGATGGCGATGGCAAGAGGCGCAAGAAGCGCAACCGCTGGGGTGACCAACA
AGAGAATAAGGCTGCCGGTCTTATGGGCCTGCCAACTATGATCATGGCGAACTTCACCAGCGAGCAGCTTGAAGC
TTATACGCTTCACCTTCGTATTGAGGAAATCAGCCAGAAGCTTCGAATCAACGACGTGGTCCCCGCCGATGGTGA
CAGGTACGTGCTTTCATCCTTTGTAAACTCCGTTTATTTGTATACTGACTTTGATCGCAGATCTCCCTCGCCACC
TCCCCAGTACGACAACTTCGGAAGACGTGTGAACACTCGCGAGTACCGTTATCGCAAGCGTCTTGAGGACGAACG
TCATAAACTGGTCGAGAAGGCCATCAAGACCATCCCTAACTACAACCCGCCTTCTGACTACAGACGCCCCACCAA
GACCCAGGAGAAGGTCTACGTCCCCGTGAATGACTATCCAGAGATTAACTTCAGTATGATAACTAACCCTCTAAC
TCCTAACCATTCTTCCATTGCGTCTATCACGAGTCCCTACTCGACTCGAGCTGACAAGGCATACCACTTTGGATG
TCCTCAGCTTGTTTCTTGCTAAACCGTGGTGCTTGATGCTGCACATATTTAAAAAAATTACAGGATCACTAACAC
CTAGCTCTTGCTATTTTTACAGTTGGCTTACTCATAGGACCTCGTGGAAACACCTTGAAAAAGATGGAGACCGAG
TCCGGTGCCAAGATTGCCATTCGAGGCAAAGGCTCCGTCAAAGAAGGAAAGGGTCGGTCTGACGCCGCTCACGGT
AGCAACCAGGAAGAAGACCTGCACTGTCTGATTATGGCGGACACCGAAGAAAAGGTTAACAAGGCCAAGAAGCTT
GTCCACAATGTCATTGAAACAGTAAGTTCCCATGTCTCATTTTGTCGATCAAAACCCGGTATTAACAGTTGCTAG
GCCGCATCCATCCCTGAAGGCCAGAACGAGCTCAAGCGCAACCAACTTCGTGAGCTGGCTGCTCTTAACGGTACC
CTTCGTGACGATGAGAACCAGGCTTGCCAGAACTGTAAGTGAACACCTTTCAAACGTCCTTTGTTGCGCGATTAA
TTCTAACCGTGGTTCTTATCAGGTGGTCAAATTGGACACCGTAAGTATGACTGCCCCGAGCAGCGTAACTTCACT
GCGAATATCATCTGTCGTGTCTGTGGCAATGCTGGCCATATGGCTCGTGATTGTCCCGACCGCCAGAGAGGCAGT
GACTGGCGTAACGCCGGCGGCCCACGTGGCGATCGTGCTGTTGGCACTGGTGATGCCGTGGATCGCGAGATGGAG
GTAAGTTCTCTTTGCTCATGACTGCTTTCTCGGGCATGGCACTAACAACCCCTTAGCAACTGATGAATGAATTGT
CTGGTGGTGCTCCTGGCGAATACGAGCCCCGTCGCATTGAAGCCGGTCCCGACGGTGGCAATGGCCGTCCCGACG
ACCGTGATGTGAAGCCCTGGCAGCAGCGTGGACCGCCGCCCCAAAGCGATGTGGCTCCATGGCAACAGCGCCGAG
ACCCTCGCCCTCGTGACGACTACGGATCCCGCGATAACTATGGATCCCGCGACAATCACGGACCTCGTGACGACT
ATGGATCTCGCAACCAGGGTGGTCCTGCCCCTTGGGCTGCGCAGGCCCAACCCCAAGGTCCACCCCAAACCCGCG
ACTACGCTTACGGATCTCAAGGTGGTTATGCTGCTCCTGGTGTTGCTCCGGGTGCTGCTCCTTGGCAGCAACCGG
CCCCTCCTGGCGGACAGCAGCCTGCCTATGGTGGTGGTTATGGTGGATACGGATATGCGGCTTATCCTCCTGGCA
TGGGAGCTCCTGGTGCTGCCCCCCCTGGTATGGGCGCACCTCCTCCCCCTCCTGGTATGGCTCCAATGTACCCCG
GAGGTGCTGGCAGTCCTCCTCCTCCGCCCCCGCCTGGCGATGCTCCGCCTCCACCACCTCCAAGCGACCTGCCTC
CCCCACCCCCACCCCCACAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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