Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO070G2_2\|g2565.t1
Gene name
Location	scaffold_02:2185630..2186578
Strand	+
Gene length (bp)	948
Transcript length (bp)	891
Coding sequence length (bp)	891
Protein length (aa)	297

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00010	HLH	Helix-loop-helix DNA-binding domain	1.2E-09	205	264

GO

GO Term	Description	Terminal node
GO:0046983	protein dimerization activity	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No
GO:0005515	protein binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 43	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
Helix-loop-helix

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO070G2_2\|g2565.t1 MCIMACNRSNEIPNLCIDQGTYLSQHLSPQSRPADFFERPDPLAANWSYDNAIDLFSINPSDMEPVSFDFADSLT NIESKDLFNDPFASSGISGFSMPEDAASLSSEFESDDQTWPSAARQSIDSNAFETELTSNYTSSQPQTQSKTRSS SASWSSSPEMKQEEIATPLPSKPTTSTSRKTRSFSRDSNHSSTGGQDPQMRNAAKRAAHNIIEKRYRTNMNAKFV SLEQAISPSGVQKHTKVGAGSLKKSEILSNALTYIDSIQQENQALHKELAMLKQNLLPAGGIWRQTKNPRL*
Coding	>Pro_DTO070G2_2\|g2565.t1 ATGTGTATCATGGCTTGCAACCGATCCAATGAGATCCCCAATCTCTGCATAGACCAGGGGACCTACCTCAGCCAA CACCTGAGTCCTCAGTCTCGACCAGCCGACTTCTTCGAAAGACCTGACCCTCTCGCTGCCAACTGGAGCTACGAC AACGCGATTGACCTGTTCTCTATCAACCCCTCCGACATGGAGCCCGTCTCGTTCGACTTCGCCGACAGCCTCACC AACATCGAGTCCAAGGATCTCTTCAACGACCCCTTTGCCAGCTCCGGAATCAGTGGCTTCTCCATGCCCGAGGAC GCAGCTTCTCTCTCATCTGAGTTCGAAAGCGACGATCAAACATGGCCCTCTGCTGCCCGTCAATCCATTGACTCA AACGCCTTCGAGACCGAGTTGACTTCAAACTACACCTCGTCTCAACCTCAAACACAGAGCAAGACTCGCTCATCT TCAGCAAGCTGGTCATCCAGTCCAGAGATGAAGCAAGAAGAGATTGCTACTCCTCTACCCTCCAAACCCACCACA TCCACATCCCGCAAGACCCGTAGCTTCTCCCGAGACTCCAACCACTCCTCAACCGGCGGCCAAGACCCTCAAATG CGGAATGCAGCCAAGCGTGCCGCCCACAACATCATTGAGAAGCGCTACCGTACCAACATGAACGCCAAATTTGTT TCTCTCGAGCAGGCCATCTCGCCCTCGGGGGTTCAAAAACATACCAAGGTTGGCGCGGGATCTCTCAAGAAGTCC GAGATCCTCAGCAATGCCCTCACCTACATCGATAGCATTCAGCAGGAGAACCAGGCCTTGCACAAGGAGCTCGCA ATGCTCAAGCAAAACCTGCTACCGGCGGGAGGAATCTGGCGTCAGACCAAAAACCCCCGACTTTGA
Transcript	>Pro_DTO070G2_2\|g2565.t1 ATGTGTATCATGGCTTGCAACCGATCCAATGAGATCCCCAATCTCTGCATAGACCAGGGGACCTACCTCAGCCAA CACCTGAGTCCTCAGTCTCGACCAGCCGACTTCTTCGAAAGACCTGACCCTCTCGCTGCCAACTGGAGCTACGAC AACGCGATTGACCTGTTCTCTATCAACCCCTCCGACATGGAGCCCGTCTCGTTCGACTTCGCCGACAGCCTCACC AACATCGAGTCCAAGGATCTCTTCAACGACCCCTTTGCCAGCTCCGGAATCAGTGGCTTCTCCATGCCCGAGGAC GCAGCTTCTCTCTCATCTGAGTTCGAAAGCGACGATCAAACATGGCCCTCTGCTGCCCGTCAATCCATTGACTCA AACGCCTTCGAGACCGAGTTGACTTCAAACTACACCTCGTCTCAACCTCAAACACAGAGCAAGACTCGCTCATCT TCAGCAAGCTGGTCATCCAGTCCAGAGATGAAGCAAGAAGAGATTGCTACTCCTCTACCCTCCAAACCCACCACA TCCACATCCCGCAAGACCCGTAGCTTCTCCCGAGACTCCAACCACTCCTCAACCGGCGGCCAAGACCCTCAAATG CGGAATGCAGCCAAGCGTGCCGCCCACAACATCATTGAGAAGCGCTACCGTACCAACATGAACGCCAAATTTGTT TCTCTCGAGCAGGCCATCTCGCCCTCGGGGGTTCAAAAACATACCAAGGTTGGCGCGGGATCTCTCAAGAAGTCC GAGATCCTCAGCAATGCCCTCACCTACATCGATAGCATTCAGCAGGAGAACCAGGCCTTGCACAAGGAGCTCGCA ATGCTCAAGCAAAACCTGCTACCGGCGGGAGGAATCTGGCGTCAGACCAAAAACCCCCGACTTTGA
Gene	>Pro_DTO070G2_2\|g2565.t1 ATGTGTATCATGGCTTGCAACCGATCCAATGAGATCCCCAATCTCTGCATAGACCAGGGGACCTACCTCAGCCAA CACCTGAGTCCTCAGTCTCGACCAGCCGACTTCTTCGAAAGACCTGACCCTCTCGCTGCCAACTGGAGCTACGAC AACGCGATTGACCTGTTCTCTATCAACCCCTCCGACATGGAGCCCGTCTCGTTCGACTTCGCCGACAGCCTCACC AACATCGAGTCCAAGGATCTCTTCAACGACCCCTTTGCCAGCTCCGGAATCAGTGGCTTCTCCATGCCCGAGGAC GCAGCTTCTCTCTCATCTGTACGATTGTCCACCCTTCCTATCAATATTTTGTCACAGAAGCTAATCTTTCTACAG GAGTTCGAAAGCGACGATCAAACATGGCCCTCTGCTGCCCGTCAATCCATTGACTCAAACGCCTTCGAGACCGAG TTGACTTCAAACTACACCTCGTCTCAACCTCAAACACAGAGCAAGACTCGCTCATCTTCAGCAAGCTGGTCATCC AGTCCAGAGATGAAGCAAGAAGAGATTGCTACTCCTCTACCCTCCAAACCCACCACATCCACATCCCGCAAGACC CGTAGCTTCTCCCGAGACTCCAACCACTCCTCAACCGGCGGCCAAGACCCTCAAATGCGGAATGCAGCCAAGCGT GCCGCCCACAACATCATTGAGAAGCGCTACCGTACCAACATGAACGCCAAATTTGTTTCTCTCGAGCAGGCCATC TCGCCCTCGGGGGTTCAAAAACATACCAAGGTTGGCGCGGGATCTCTCAAGAAGTCCGAGATCCTCAGCAATGCC CTCACCTACATCGATAGCATTCAGCAGGAGAACCAGGCCTTGCACAAGGAGCTCGCAATGCTCAAGCAAAACCTG CTACCGGCGGGAGGAATCTGGCGTCAGACCAAAAACCCCCGACTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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