Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g2560.t1
Gene name
Locationscaffold_02:2171309..2174074
Strand+
Gene length (bp)2765
Transcript length (bp)2658
Coding sequence length (bp)2658
Protein length (aa) 886

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12708 Pectate_lyase_3 Pectate lyase superfamily protein 3.3E-47 178 396
PF12708 Pectate_lyase_3 Pectate lyase superfamily protein 1.3E-08 514 575

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g2560.t1
MRGFSSLVAIAAVVSTTSGAIVPLDLVHASSSHALSSPTVHARPSNNDYPFDWALASSLAGLTGTSSTVIVHDCA
CTKASSVVANTLSTTVQSPSKADDTLMATKVAGSSSNMAQATTTAASASTPSPISQADHSPATKTCAAPTTKSPE
TYWLDEQDHNQQGAGFAPYAKTSLYPVYRNVMDYSVVNDGSGNQTPKLQKAIDDDGAGGSRKGQGVTRYPAQVYL
PGGVYQLETTLNLTVGTIIVGNPLNPPIIKAAPGFRGDYLIMGYDSNNGNPETSFATLVKNVIVDTTALSPDRHF
TALQWGVAQGSGLTNVKIRMPKDSTGHTGIDINAGSTIAVTDVDIIGGAIGIKNSNQQVNFKNIYFQSCKTAFSA
AGGWTVLLQQATFDSCGTGIDMTGNGLGSLVLLDSTSTNTGPVVRFYDSSHDSGNQNSQFLIQNLKHDTSNAIAV
DAQGKVALAANAHVDTWVWGTVVPETYQTGVSWETKRPAALLVGDKYFTKAQPTYQDYSTADIVNVKTVSGHTVK
GDGKTDDTKGLNAILAENADSCKVTYIPFGVYRVSDTIFVPVGTRIVGEAWSVISGYGEKFKDSGNPRPVVQLGN
PGDVGVIEIQDMRFSVGEILPGAKIIEINAAGAQPGDIGLWNTMVTVGGTADTSISSACTSQNPKDCMAAFMVMH
LTNSSSAYIENFWGWTADHNLDSESALTIISTGRGILVESTKGTWLTGTGSEHHWLYNYNFHKAQNVFAGLLQTE
TPYMQGQGEYQAAPAPWTAVAKYGDPDFSWCAADDQKCRTAIATNVDGGSNIALYNSAAWAFFDGYWNGLYNMPC
EGNCQTNMMRVTNDPQNLVWYSISTRKTDVMVLDGKSNPRQSDHQGGWEAIIQVYGQFTA*
Coding >Pro_DTO070G2_2|g2560.t1
ATGAGGGGCTTCTCTTCTTTGGTTGCAATTGCAGCGGTTGTGTCTACAACATCAGGTGCCATTGTGCCTCTAGAC
TTGGTGCATGCGTCTTCATCGCACGCACTTTCATCTCCAACCGTTCATGCAAGGCCGTCAAATAATGACTACCCT
TTTGATTGGGCGCTTGCATCTTCTTTGGCAGGTCTGACCGGGACATCATCCACTGTTATTGTTCATGACTGCGCA
TGTACCAAGGCTTCGTCTGTTGTAGCAAATACTCTTTCCACGACCGTGCAATCTCCATCCAAGGCTGACGATACC
TTGATGGCCACAAAGGTGGCTGGCTCCTCCTCGAATATGGCACAGGCTACTACGACAGCAGCCAGTGCTTCAACC
CCATCTCCAATATCTCAAGCAGATCATTCGCCCGCGACAAAAACATGTGCTGCCCCTACCACCAAATCACCGGAG
ACCTACTGGCTGGACGAGCAGGACCACAATCAGCAAGGAGCAGGATTTGCTCCCTACGCCAAAACGTCGCTCTAC
CCGGTGTATCGCAATGTGATGGACTACTCGGTCGTCAATGATGGCAGCGGTAATCAAACTCCGAAGTTACAGAAG
GCTATAGACGATGATGGGGCGGGCGGCAGTCGCAAGGGTCAAGGTGTCACGCGGTATCCTGCCCAGGTCTACCTT
CCAGGCGGCGTGTACCAGCTTGAAACCACTCTCAACCTGACTGTTGGTACGATAATTGTTGGCAATCCGTTGAAC
CCACCCATCATCAAAGCTGCACCAGGTTTCCGTGGTGACTATCTCATCATGGGGTACGATTCAAACAATGGCAAC
CCAGAAACCAGCTTTGCAACGCTTGTCAAGAATGTGATCGTTGATACGACAGCCCTCAGCCCGGACCGCCACTTC
ACTGCTCTTCAATGGGGAGTTGCCCAAGGGTCGGGGTTGACAAATGTCAAGATTCGCATGCCAAAAGATTCCACG
GGTCATACTGGGATCGATATCAATGCCGGGTCAACAATTGCCGTCACGGATGTGGATATTATTGGCGGAGCTATC
GGGATCAAGAACTCCAACCAACAGGTCAACTTCAAGAACATCTATTTCCAATCTTGCAAAACAGCATTCTCCGCG
GCAGGTGGGTGGACGGTGTTGCTCCAACAAGCAACTTTTGATAGCTGCGGCACTGGTATCGATATGACTGGAAAT
GGACTGGGTAGCCTAGTGCTTCTAGATTCCACTTCCACGAACACGGGACCAGTAGTCAGATTCTATGACTCGTCC
CATGATTCAGGAAACCAAAATAGTCAGTTTCTCATTCAGAACCTCAAGCACGATACTTCGAACGCTATCGCGGTC
GACGCTCAGGGCAAAGTGGCATTGGCCGCTAATGCTCATGTCGACACATGGGTCTGGGGCACTGTTGTTCCAGAA
ACCTACCAGACTGGGGTGAGCTGGGAAACAAAGCGGCCGGCCGCTTTGCTGGTTGGAGACAAATACTTTACGAAG
GCCCAGCCCACCTATCAAGATTACAGCACAGCGGATATTGTAAATGTGAAGACCGTATCTGGACACACAGTGAAA
GGTGACGGTAAGACTGACGACACCAAAGGCCTGAACGCTATCTTGGCTGAAAATGCCGATTCGTGCAAGGTGACA
TACATCCCCTTTGGTGTATATCGAGTCTCAGACACTATCTTCGTCCCAGTCGGAACTCGCATTGTTGGAGAAGCA
TGGTCTGTTATTTCTGGATATGGGGAGAAGTTCAAGGATTCCGGCAATCCGAGACCTGTCGTTCAACTTGGCAAT
CCTGGCGACGTCGGTGTGATTGAGATTCAGGACATGAGATTCTCCGTTGGCGAAATCCTGCCAGGGGCCAAGATC
ATTGAAATCAATGCCGCAGGTGCTCAGCCCGGCGATATCGGTCTTTGGAACACGATGGTGACGGTGGGCGGGACC
GCTGACACAAGTATCTCCAGTGCTTGCACGTCGCAAAACCCCAAGGACTGTATGGCTGCGTTTATGGTAATGCAC
CTGACCAACAGTTCGTCCGCATATATTGAGAACTTCTGGGGATGGACCGCCGATCACAACCTTGATAGCGAGTCA
GCTCTCACTATTATCTCAACAGGCCGCGGAATCTTGGTCGAATCCACCAAGGGCACCTGGCTGACTGGAACCGGT
TCCGAGCATCACTGGCTGTATAACTACAACTTCCACAAAGCCCAGAACGTCTTTGCGGGTCTTCTTCAAACAGAA
ACACCGTATATGCAAGGCCAAGGCGAGTACCAGGCCGCACCAGCGCCATGGACAGCTGTCGCCAAATACGGTGAC
CCTGATTTCTCGTGGTGTGCTGCAGATGATCAAAAGTGTCGTACCGCGATAGCTACGAACGTCGACGGCGGATCC
AACATTGCGCTGTACAACTCAGCTGCCTGGGCGTTTTTCGACGGGTACTGGAATGGTCTGTACAATATGCCTTGC
GAGGGGAACTGCCAAACCAACATGATGCGGGTGACGAATGACCCTCAGAATTTGGTTTGGTACTCGATCAGCACG
CGCAAGACGGATGTAATGGTGCTCGATGGGAAGAGCAATCCCCGTCAATCAGACCACCAAGGCGGGTGGGAAGCC
ATCATCCAGGTGTACGGCCAGTTTACAGCGTGA
Transcript >Pro_DTO070G2_2|g2560.t1
ATGAGGGGCTTCTCTTCTTTGGTTGCAATTGCAGCGGTTGTGTCTACAACATCAGGTGCCATTGTGCCTCTAGAC
TTGGTGCATGCGTCTTCATCGCACGCACTTTCATCTCCAACCGTTCATGCAAGGCCGTCAAATAATGACTACCCT
TTTGATTGGGCGCTTGCATCTTCTTTGGCAGGTCTGACCGGGACATCATCCACTGTTATTGTTCATGACTGCGCA
TGTACCAAGGCTTCGTCTGTTGTAGCAAATACTCTTTCCACGACCGTGCAATCTCCATCCAAGGCTGACGATACC
TTGATGGCCACAAAGGTGGCTGGCTCCTCCTCGAATATGGCACAGGCTACTACGACAGCAGCCAGTGCTTCAACC
CCATCTCCAATATCTCAAGCAGATCATTCGCCCGCGACAAAAACATGTGCTGCCCCTACCACCAAATCACCGGAG
ACCTACTGGCTGGACGAGCAGGACCACAATCAGCAAGGAGCAGGATTTGCTCCCTACGCCAAAACGTCGCTCTAC
CCGGTGTATCGCAATGTGATGGACTACTCGGTCGTCAATGATGGCAGCGGTAATCAAACTCCGAAGTTACAGAAG
GCTATAGACGATGATGGGGCGGGCGGCAGTCGCAAGGGTCAAGGTGTCACGCGGTATCCTGCCCAGGTCTACCTT
CCAGGCGGCGTGTACCAGCTTGAAACCACTCTCAACCTGACTGTTGGTACGATAATTGTTGGCAATCCGTTGAAC
CCACCCATCATCAAAGCTGCACCAGGTTTCCGTGGTGACTATCTCATCATGGGGTACGATTCAAACAATGGCAAC
CCAGAAACCAGCTTTGCAACGCTTGTCAAGAATGTGATCGTTGATACGACAGCCCTCAGCCCGGACCGCCACTTC
ACTGCTCTTCAATGGGGAGTTGCCCAAGGGTCGGGGTTGACAAATGTCAAGATTCGCATGCCAAAAGATTCCACG
GGTCATACTGGGATCGATATCAATGCCGGGTCAACAATTGCCGTCACGGATGTGGATATTATTGGCGGAGCTATC
GGGATCAAGAACTCCAACCAACAGGTCAACTTCAAGAACATCTATTTCCAATCTTGCAAAACAGCATTCTCCGCG
GCAGGTGGGTGGACGGTGTTGCTCCAACAAGCAACTTTTGATAGCTGCGGCACTGGTATCGATATGACTGGAAAT
GGACTGGGTAGCCTAGTGCTTCTAGATTCCACTTCCACGAACACGGGACCAGTAGTCAGATTCTATGACTCGTCC
CATGATTCAGGAAACCAAAATAGTCAGTTTCTCATTCAGAACCTCAAGCACGATACTTCGAACGCTATCGCGGTC
GACGCTCAGGGCAAAGTGGCATTGGCCGCTAATGCTCATGTCGACACATGGGTCTGGGGCACTGTTGTTCCAGAA
ACCTACCAGACTGGGGTGAGCTGGGAAACAAAGCGGCCGGCCGCTTTGCTGGTTGGAGACAAATACTTTACGAAG
GCCCAGCCCACCTATCAAGATTACAGCACAGCGGATATTGTAAATGTGAAGACCGTATCTGGACACACAGTGAAA
GGTGACGGTAAGACTGACGACACCAAAGGCCTGAACGCTATCTTGGCTGAAAATGCCGATTCGTGCAAGGTGACA
TACATCCCCTTTGGTGTATATCGAGTCTCAGACACTATCTTCGTCCCAGTCGGAACTCGCATTGTTGGAGAAGCA
TGGTCTGTTATTTCTGGATATGGGGAGAAGTTCAAGGATTCCGGCAATCCGAGACCTGTCGTTCAACTTGGCAAT
CCTGGCGACGTCGGTGTGATTGAGATTCAGGACATGAGATTCTCCGTTGGCGAAATCCTGCCAGGGGCCAAGATC
ATTGAAATCAATGCCGCAGGTGCTCAGCCCGGCGATATCGGTCTTTGGAACACGATGGTGACGGTGGGCGGGACC
GCTGACACAAGTATCTCCAGTGCTTGCACGTCGCAAAACCCCAAGGACTGTATGGCTGCGTTTATGGTAATGCAC
CTGACCAACAGTTCGTCCGCATATATTGAGAACTTCTGGGGATGGACCGCCGATCACAACCTTGATAGCGAGTCA
GCTCTCACTATTATCTCAACAGGCCGCGGAATCTTGGTCGAATCCACCAAGGGCACCTGGCTGACTGGAACCGGT
TCCGAGCATCACTGGCTGTATAACTACAACTTCCACAAAGCCCAGAACGTCTTTGCGGGTCTTCTTCAAACAGAA
ACACCGTATATGCAAGGCCAAGGCGAGTACCAGGCCGCACCAGCGCCATGGACAGCTGTCGCCAAATACGGTGAC
CCTGATTTCTCGTGGTGTGCTGCAGATGATCAAAAGTGTCGTACCGCGATAGCTACGAACGTCGACGGCGGATCC
AACATTGCGCTGTACAACTCAGCTGCCTGGGCGTTTTTCGACGGGTACTGGAATGGTCTGTACAATATGCCTTGC
GAGGGGAACTGCCAAACCAACATGATGCGGGTGACGAATGACCCTCAGAATTTGGTTTGGTACTCGATCAGCACG
CGCAAGACGGATGTAATGGTGCTCGATGGGAAGAGCAATCCCCGTCAATCAGACCACCAAGGCGGGTGGGAAGCC
ATCATCCAGGTGTACGGCCAGTTTACAGCGTGA
Gene >Pro_DTO070G2_2|g2560.t1
ATGAGGGGCTTCTCTTCTTTGGTTGCAATTGCAGCGGTTGTGTCTACAACATCAGGTGCCATTGTGCCTCTAGAC
TTGGTGCATGCGTCTTCATCGCACGCACTTTCATCTCCAACCGTTCATGCAAGGCCGTCAAATAATGACTACCCT
TTTGATTGGGCGCTTGCATCTTCTTTGGCAGGTCTGACCGGGACATCATCCACTGTTATTGTTCATGACTGCGCA
TGTACCAAGGCTTCGTCTGTTGTAGCAAATACTCTTTCCACGACCGTGCAATCTCCATCCAAGGCTGACGATACC
TTGATGGCCACAAAGGTGGCTGGCTCCTCCTCGAATATGGCACAGGCTACTACGACAGCAGCCAGTGCTTCAACC
CCATCGTATGTGTCATTTAACGTCTCATAGGATACTTGATTGCTGACAACCTGTCCAGTCCAATATCTCAAGCAG
ATCATTCGCCCGCGACAAAAACATGTGCTGCCCCTACCACCAAATCACCGGAGACCTACTGGCTGGACGAGCAGG
ACCACAATCAGCAAGGAGCAGGATTTGCTCCCTACGCCAAAACGTCGCTCTACCCGGTGTATCGCAATGTGATGG
ACTACTCGGTCGTCAATGATGGCAGCGGTAATCAAACTCCGAAGTTACAGAAGGCTATAGACGATGATGGGGCGG
GCGGCAGTCGCAAGGGTCAAGGTGTCACGCGGTATCCTGCCCAGGTCTACCTTCCAGGCGGCGTGTACCAGCTTG
AAACCACTCTCAACCTGACTGTTGGTACGATAATTGTTGGCAATCCGTTGAACCCACCCATCATCAAAGCTGCAC
CAGGTTTCCGTGGTGACTATCTCATCATGGGGTACGATTCAAACAATGGCAACCCAGAAACCAGCTTTGCAACGC
TTGTCAAGAATGTGATCGTTGATACGACAGCCCTCAGCCCGGACCGCCACTTCACTGCTCTTCAATGGGGAGTTG
CCCAAGGGTCGGGGTTGACAAATGTCAAGATTCGCATGCCAAAAGATTCCACGGGTCATACTGGGATCGATATCA
ATGCCGGGTCAACAATTGCCGTCACGGATGTGGTAAGTAATTCAGAGAAGCCCAAGAAGAAGAAAAAGCAGCCTA
ACAAAGCGTAGGATATTATTGGCGGAGCTATCGGGATCAAGAACTCCAACCAACAGGTCAACTTCAAGAACATCT
ATTTCCAATCTTGCAAAACAGCATTCTCCGCGGCAGGTGGGTGGACGGTGTTGCTCCAACAAGCAACTTTTGATA
GCTGCGGCACTGGTATCGATATGACTGGAAATGGACTGGGTAGCCTAGTGCTTCTAGATTCCACTTCCACGAACA
CGGGACCAGTAGTCAGATTCTATGACTCGTCCCATGATTCAGGAAACCAAAATAGTCAGTTTCTCATTCAGAACC
TCAAGCACGATACTTCGAACGCTATCGCGGTCGACGCTCAGGGCAAAGTGGCATTGGCCGCTAATGCTCATGTCG
ACACATGGGTCTGGGGCACTGTTGTTCCAGAAACCTACCAGACTGGGGTGAGCTGGGAAACAAAGCGGCCGGCCG
CTTTGCTGGTTGGAGACAAATACTTTACGAAGGCCCAGCCCACCTATCAAGATTACAGCACAGCGGATATTGTAA
ATGTGAAGACCGTATCTGGACACACAGTGAAAGGTGACGGTAAGACTGACGACACCAAAGGCCTGAACGCTATCT
TGGCTGAAAATGCCGATTCGTGCAAGGTGACATACATCCCCTTTGGTGTATATCGAGTCTCAGACACTATCTTCG
TCCCAGTCGGAACTCGCATTGTTGGAGAAGCATGGTCTGTTATTTCTGGATATGGGGAGAAGTTCAAGGATTCCG
GCAATCCGAGACCTGTCGTTCAACTTGGCAATCCTGGCGACGTCGGTGTGATTGAGATTCAGGACATGAGATTCT
CCGTTGGCGAAATCCTGCCAGGGGCCAAGATCATTGAAATCAATGCCGCAGGTGCTCAGCCCGGCGATATCGGTC
TTTGGAACACGATGGTGACGGTGGGCGGGACCGCTGACACAAGTATCTCCAGTGCTTGCACGTCGCAAAACCCCA
AGGACTGTATGGCTGCGTTTATGGTAATGCACCTGACCAACAGTTCGTCCGCATATATTGAGAACTTCTGGGGAT
GGACCGCCGATCACAACCTTGATAGCGAGTCAGCTCTCACTATTATCTCAACAGGCCGCGGAATCTTGGTCGAAT
CCACCAAGGGCACCTGGCTGACTGGAACCGGTTCCGAGCATCACTGGCTGTATAACTACAACTTCCACAAAGCCC
AGAACGTCTTTGCGGGTCTTCTTCAAACAGAAACACCGTATATGCAAGGCCAAGGCGAGTACCAGGCCGCACCAG
CGCCATGGACAGCTGTCGCCAAATACGGTGACCCTGATTTCTCGTGGTGTGCTGCAGATGATCAAAAGTGTCGTA
CCGCGATAGCTACGAACGTCGACGGCGGATCCAACATTGCGCTGTACAACTCAGCTGCCTGGGCGTTTTTCGACG
GGTACTGGAATGGTCTGTACAATATGCCTTGCGAGGGGAACTGCCAAACCAACATGATGCGGGTGACGAATGACC
CTCAGAATTTGGTTTGGTACTCGATCAGCACGCGCAAGACGGATGTAATGGTGCTCGATGGGAAGAGCAATCCCC
GTCAATCAGACCACCAAGGCGGGTGGGAAGCCATCATCCAGGTGTACGGCCAGTTTACAGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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