Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g2490.t1
Gene name
Locationscaffold_02:1982187..1983109
Strand+
Gene length (bp)922
Transcript length (bp)723
Coding sequence length (bp)723
Protein length (aa) 241

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05630 NPP1 Necrosis inducing protein (NPP1) 1.7E-60 50 238

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g2490.t1
MIPQLIAGLAALTVLPVTASPVELTRRGTVASDAIVGFPQTVPAGTVGDLYLAYQPKLYVVNGCVPFPAVDAEGN
TNAGLSPTGSSNGDCSTSTGQIYVRGASSGNYYALMYSWYFPKDSPSTDLGHRHDWEGVIIWLSSDGSTTASNIV
AVCPSAHGDWNCSTDGYTLDGTASLIKYQSIWPVNHSLGLTTTVGGTQPLVAWESLSTVVQDALDTTDFGAANVP
FDDGNFASNLAKATF*
Coding >Pro_DTO070G2_2|g2490.t1
ATGATTCCTCAACTGATAGCTGGACTGGCTGCTCTCACTGTTCTGCCTGTGACGGCTAGCCCGGTTGAGCTGACA
CGTCGAGGAACAGTTGCATCCGACGCAATTGTCGGATTCCCCCAGACAGTTCCAGCTGGTACCGTTGGCGACCTC
TATTTGGCCTACCAGCCAAAGCTTTATGTTGTCAATGGCTGCGTGCCTTTCCCGGCCGTTGATGCAGAAGGGAAC
ACCAACGCCGGTCTCAGCCCAACAGGAAGCTCAAATGGTGATTGCAGTACGAGCACAGGGCAGATATACGTGAGA
GGCGCTTCTTCAGGCAACTACTATGCCCTGATGTATTCCTGGTATTTCCCCAAGGATTCGCCTTCGACTGATCTC
GGCCATCGCCATGATTGGGAAGGTGTTATTATCTGGCTTTCCAGTGATGGAAGTACCACTGCATCGAACATTGTG
GCCGTCTGTCCATCAGCACACGGTGACTGGAACTGCAGTACAGATGGCTACACGCTTGATGGGACCGCCTCTCTG
ATCAAGTACCAGTCCATCTGGCCTGTTAATCATTCTCTCGGCCTGACAACCACTGTGGGCGGCACACAGCCGTTG
GTTGCCTGGGAATCATTGTCAACTGTCGTGCAAGATGCCCTGGATACAACTGATTTTGGAGCAGCGAACGTTCCC
TTCGACGACGGAAACTTTGCCTCCAACCTAGCAAAGGCAACGTTTTGA
Transcript >Pro_DTO070G2_2|g2490.t1
ATGATTCCTCAACTGATAGCTGGACTGGCTGCTCTCACTGTTCTGCCTGTGACGGCTAGCCCGGTTGAGCTGACA
CGTCGAGGAACAGTTGCATCCGACGCAATTGTCGGATTCCCCCAGACAGTTCCAGCTGGTACCGTTGGCGACCTC
TATTTGGCCTACCAGCCAAAGCTTTATGTTGTCAATGGCTGCGTGCCTTTCCCGGCCGTTGATGCAGAAGGGAAC
ACCAACGCCGGTCTCAGCCCAACAGGAAGCTCAAATGGTGATTGCAGTACGAGCACAGGGCAGATATACGTGAGA
GGCGCTTCTTCAGGCAACTACTATGCCCTGATGTATTCCTGGTATTTCCCCAAGGATTCGCCTTCGACTGATCTC
GGCCATCGCCATGATTGGGAAGGTGTTATTATCTGGCTTTCCAGTGATGGAAGTACCACTGCATCGAACATTGTG
GCCGTCTGTCCATCAGCACACGGTGACTGGAACTGCAGTACAGATGGCTACACGCTTGATGGGACCGCCTCTCTG
ATCAAGTACCAGTCCATCTGGCCTGTTAATCATTCTCTCGGCCTGACAACCACTGTGGGCGGCACACAGCCGTTG
GTTGCCTGGGAATCATTGTCAACTGTCGTGCAAGATGCCCTGGATACAACTGATTTTGGAGCAGCGAACGTTCCC
TTCGACGACGGAAACTTTGCCTCCAACCTAGCAAAGGCAACGTTTTGA
Gene >Pro_DTO070G2_2|g2490.t1
ATGATTCCTCAACTGATAGCTGGACTGGCTGCTCTCACTGTTCTGCCTGTGACGGCTAGCCCGGTTGAGCTGACA
CGTCGAGGAACAGTTGCATCCGACGCAATTGTCGGATTCCCCCAGACAGTTCCAGCTGGTACCGTTGGCGACCTC
TATTTGGCCTACCAGCCAAAGCTTTATGTTGTCAATGGCTGCGTGCCTTTCCCGGCCGTTGATGCAGAAGGGAAC
ACCAAGTGAGCGAAATAATCTCCTCTTTAACGATCTCCTGGACTCCCATATCTAATATCTGTGATGTAGCGCCGG
TCTCAGCCCAACAGGAAGCTCAAATGGTGATTGCAGTACGAGCACAGGGCAGATATACGGTGAGTTTCTCCAGAA
GTATCTATTGAATACCTGGCCCTGGGTACATTGACTAACGGGCTTCTATTTGCAATTTACAGTGAGAGGCGCTTC
TTCAGGCAACTACTATGCCCTGATGTATTCCTGGTATTTCCCCAAGGATTCGCCTTCGACTGATCTCGGCCATCG
CCATGATTGGGAAGGTGTTATTATCTGGCTTTCCAGTGATGGAAGTACCACTGCATCGAACATTGTGGCCGTCTG
TCCATCAGCACACGGTGACTGGAACTGCAGTACAGATGGCTACACGCTTGATGGGACCGCCTCTCTGATCAAGTA
CCAGTCCATCTGGCCTGTTAATCATTCTCTCGGCCTGACAACCACTGTGGGCGGCACACAGCCGTTGGTTGCCTG
GGAATCATTGTCAAGTAAGTTATCCAAATATACCCCCAACTTCTGGAAGCGCAATCTAACATATTCTTAAGCTGT
CGTGCAAGATGCCCTGGATACAACTGATTTTGGAGCAGCGAACGTTCCCTTCGACGACGGAAACTTTGCCTCCAA
CCTAGCAAAGGCAACGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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