Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO070G2_2\|g2490.t1
Gene name
Location	scaffold_02:1982187..1983109
Strand	+
Gene length (bp)	922
Transcript length (bp)	723
Coding sequence length (bp)	723
Protein length (aa)	241

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05630	NPP1	Necrosis inducing protein (NPP1)	1.7E-60	50	238

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO070G2_2\|g2490.t1 MIPQLIAGLAALTVLPVTASPVELTRRGTVASDAIVGFPQTVPAGTVGDLYLAYQPKLYVVNGCVPFPAVDAEGN TNAGLSPTGSSNGDCSTSTGQIYVRGASSGNYYALMYSWYFPKDSPSTDLGHRHDWEGVIIWLSSDGSTTASNIV AVCPSAHGDWNCSTDGYTLDGTASLIKYQSIWPVNHSLGLTTTVGGTQPLVAWESLSTVVQDALDTTDFGAANVP FDDGNFASNLAKATF*
Coding	>Pro_DTO070G2_2\|g2490.t1 ATGATTCCTCAACTGATAGCTGGACTGGCTGCTCTCACTGTTCTGCCTGTGACGGCTAGCCCGGTTGAGCTGACA CGTCGAGGAACAGTTGCATCCGACGCAATTGTCGGATTCCCCCAGACAGTTCCAGCTGGTACCGTTGGCGACCTC TATTTGGCCTACCAGCCAAAGCTTTATGTTGTCAATGGCTGCGTGCCTTTCCCGGCCGTTGATGCAGAAGGGAAC ACCAACGCCGGTCTCAGCCCAACAGGAAGCTCAAATGGTGATTGCAGTACGAGCACAGGGCAGATATACGTGAGA GGCGCTTCTTCAGGCAACTACTATGCCCTGATGTATTCCTGGTATTTCCCCAAGGATTCGCCTTCGACTGATCTC GGCCATCGCCATGATTGGGAAGGTGTTATTATCTGGCTTTCCAGTGATGGAAGTACCACTGCATCGAACATTGTG GCCGTCTGTCCATCAGCACACGGTGACTGGAACTGCAGTACAGATGGCTACACGCTTGATGGGACCGCCTCTCTG ATCAAGTACCAGTCCATCTGGCCTGTTAATCATTCTCTCGGCCTGACAACCACTGTGGGCGGCACACAGCCGTTG GTTGCCTGGGAATCATTGTCAACTGTCGTGCAAGATGCCCTGGATACAACTGATTTTGGAGCAGCGAACGTTCCC TTCGACGACGGAAACTTTGCCTCCAACCTAGCAAAGGCAACGTTTTGA
Transcript	>Pro_DTO070G2_2\|g2490.t1 ATGATTCCTCAACTGATAGCTGGACTGGCTGCTCTCACTGTTCTGCCTGTGACGGCTAGCCCGGTTGAGCTGACA CGTCGAGGAACAGTTGCATCCGACGCAATTGTCGGATTCCCCCAGACAGTTCCAGCTGGTACCGTTGGCGACCTC TATTTGGCCTACCAGCCAAAGCTTTATGTTGTCAATGGCTGCGTGCCTTTCCCGGCCGTTGATGCAGAAGGGAAC ACCAACGCCGGTCTCAGCCCAACAGGAAGCTCAAATGGTGATTGCAGTACGAGCACAGGGCAGATATACGTGAGA GGCGCTTCTTCAGGCAACTACTATGCCCTGATGTATTCCTGGTATTTCCCCAAGGATTCGCCTTCGACTGATCTC GGCCATCGCCATGATTGGGAAGGTGTTATTATCTGGCTTTCCAGTGATGGAAGTACCACTGCATCGAACATTGTG GCCGTCTGTCCATCAGCACACGGTGACTGGAACTGCAGTACAGATGGCTACACGCTTGATGGGACCGCCTCTCTG ATCAAGTACCAGTCCATCTGGCCTGTTAATCATTCTCTCGGCCTGACAACCACTGTGGGCGGCACACAGCCGTTG GTTGCCTGGGAATCATTGTCAACTGTCGTGCAAGATGCCCTGGATACAACTGATTTTGGAGCAGCGAACGTTCCC TTCGACGACGGAAACTTTGCCTCCAACCTAGCAAAGGCAACGTTTTGA
Gene	>Pro_DTO070G2_2\|g2490.t1 ATGATTCCTCAACTGATAGCTGGACTGGCTGCTCTCACTGTTCTGCCTGTGACGGCTAGCCCGGTTGAGCTGACA CGTCGAGGAACAGTTGCATCCGACGCAATTGTCGGATTCCCCCAGACAGTTCCAGCTGGTACCGTTGGCGACCTC TATTTGGCCTACCAGCCAAAGCTTTATGTTGTCAATGGCTGCGTGCCTTTCCCGGCCGTTGATGCAGAAGGGAAC ACCAAGTGAGCGAAATAATCTCCTCTTTAACGATCTCCTGGACTCCCATATCTAATATCTGTGATGTAGCGCCGG TCTCAGCCCAACAGGAAGCTCAAATGGTGATTGCAGTACGAGCACAGGGCAGATATACGGTGAGTTTCTCCAGAA GTATCTATTGAATACCTGGCCCTGGGTACATTGACTAACGGGCTTCTATTTGCAATTTACAGTGAGAGGCGCTTC TTCAGGCAACTACTATGCCCTGATGTATTCCTGGTATTTCCCCAAGGATTCGCCTTCGACTGATCTCGGCCATCG CCATGATTGGGAAGGTGTTATTATCTGGCTTTCCAGTGATGGAAGTACCACTGCATCGAACATTGTGGCCGTCTG TCCATCAGCACACGGTGACTGGAACTGCAGTACAGATGGCTACACGCTTGATGGGACCGCCTCTCTGATCAAGTA CCAGTCCATCTGGCCTGTTAATCATTCTCTCGGCCTGACAACCACTGTGGGCGGCACACAGCCGTTGGTTGCCTG GGAATCATTGTCAAGTAAGTTATCCAAATATACCCCCAACTTCTGGAAGCGCAATCTAACATATTCTTAAGCTGT CGTGCAAGATGCCCTGGATACAACTGATTTTGGAGCAGCGAACGTTCCCTTCGACGACGGAAACTTTGCCTCCAA CCTAGCAAAGGCAACGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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