Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO070G2_2\|g2452.t1
Gene name
Location	scaffold_02:1884833..1885452
Strand	+
Gene length (bp)	619
Transcript length (bp)	573
Coding sequence length (bp)	573
Protein length (aa)	191

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01814	Hemerythrin	Hemerythrin HHE cation binding domain	8.0E-12	5	114

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 45	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO070G2_2\|g2452.t1 MVRISDVIKDDHRKLESYYNIIVNSEDQDEQTRYQNQFTWELARHAVAEELVVFPALEKLRAGKEQLDDDRREHK ALKEMLNVFQDLNSSDPRFFPTITLLMEGLAQHMKDEEANDLAILEESLTSDESEKLAESLSRTKIFVPSRSHPH DLDNPRYETAVDLLTAPLDHLQDLFRRWPDEESTLTAPME*
Coding	>Pro_DTO070G2_2\|g2452.t1 ATGGTTCGGATAAGCGACGTGATCAAAGATGATCACCGGAAACTCGAATCTTATTACAATATCATTGTCAACTCT GAAGATCAAGATGAACAAACCCGATATCAGAACCAGTTCACCTGGGAGCTTGCACGACACGCCGTCGCCGAGGAG CTGGTAGTGTTCCCTGCACTGGAAAAGCTTCGAGCTGGCAAGGAGCAGCTAGATGATGATCGGCGTGAGCATAAA GCGCTCAAAGAAATGCTCAACGTTTTCCAGGATCTAAACTCCTCCGATCCGCGCTTCTTCCCTACAATTACATTG TTGATGGAAGGTCTTGCCCAGCATATGAAAGACGAAGAGGCCAATGATCTGGCCATATTAGAGGAGTCCCTCACT TCCGACGAGAGCGAGAAGTTGGCTGAATCTCTGAGCCGCACTAAGATTTTTGTGCCCTCTCGCTCGCATCCACAT GATCTGGACAACCCACGCTATGAGACTGCAGTCGACCTGCTCACAGCTCCCCTGGATCATCTCCAGGATCTATTC CGAAGGTGGCCGGATGAAGAAAGCACTCTGACCGCGCCAATGGAGTAG
Transcript	>Pro_DTO070G2_2\|g2452.t1 ATGGTTCGGATAAGCGACGTGATCAAAGATGATCACCGGAAACTCGAATCTTATTACAATATCATTGTCAACTCT GAAGATCAAGATGAACAAACCCGATATCAGAACCAGTTCACCTGGGAGCTTGCACGACACGCCGTCGCCGAGGAG CTGGTAGTGTTCCCTGCACTGGAAAAGCTTCGAGCTGGCAAGGAGCAGCTAGATGATGATCGGCGTGAGCATAAA GCGCTCAAAGAAATGCTCAACGTTTTCCAGGATCTAAACTCCTCCGATCCGCGCTTCTTCCCTACAATTACATTG TTGATGGAAGGTCTTGCCCAGCATATGAAAGACGAAGAGGCCAATGATCTGGCCATATTAGAGGAGTCCCTCACT TCCGACGAGAGCGAGAAGTTGGCTGAATCTCTGAGCCGCACTAAGATTTTTGTGCCCTCTCGCTCGCATCCACAT GATCTGGACAACCCACGCTATGAGACTGCAGTCGACCTGCTCACAGCTCCCCTGGATCATCTCCAGGATCTATTC CGAAGGTGGCCGGATGAAGAAAGCACTCTGACCGCGCCAATGGAGTAG
Gene	>Pro_DTO070G2_2\|g2452.t1 ATGGTTCGGATAAGCGACGTGATCAAAGATGATCACCGGAAACTCGAATCTTATTACAATATCATTGTCAACTCT GAAGATCAAGATGAACAAACCCGATATCAGAACCAGTTCACCTGGGAGCTTGCACGACACGCCGTCGCCGAGGAG CTGGTAGTGTTCCCTGCACTGGAAAAGCTTCGAGCTGGCAAGGAGCAGCTAGATGATGATCGGCGTGAGCATAAA GCGGTAAGTGTTGATATCCTTCATGGAGAGCGATGCTGATATGACATAGCTCAAAGAAATGCTCAACGTTTTCCA GGATCTAAACTCCTCCGATCCGCGCTTCTTCCCTACAATTACATTGTTGATGGAAGGTCTTGCCCAGCATATGAA AGACGAAGAGGCCAATGATCTGGCCATATTAGAGGAGTCCCTCACTTCCGACGAGAGCGAGAAGTTGGCTGAATC TCTGAGCCGCACTAAGATTTTTGTGCCCTCTCGCTCGCATCCACATGATCTGGACAACCCACGCTATGAGACTGC AGTCGACCTGCTCACAGCTCCCCTGGATCATCTCCAGGATCTATTCCGAAGGTGGCCGGATGAAGAAAGCACTCT GACCGCGCCAATGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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