Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g241.t1
Gene name
Locationscaffold_01:637104..637774
Strand+
Gene length (bp)670
Transcript length (bp)522
Coding sequence length (bp)522
Protein length (aa) 174

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 1.6E-30 7 144

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 44 66 22
3 71 93 22
4 128 150 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g241.t1
MGLRGVQLGLRAWEFVFSLLVMALVGNMIAEAFAGNPATVNYSIYTSVFSMFTLFYLVPASFNIDWSGHPLIMII
IDALNCIFFFCAAIALAAKLECHSCTNREYLINNEITNGSHNMTKRCREAQASVAFLWFAWAGYMASVIVSAFMA
RSSAGPSRRTSRRGGARPNMTQV*
Coding >Pro_DTO070G2_2|g241.t1
ATGGGTCTCAGAGGTGTGCAGCTCGGTCTCAGAGCCTGGGAGTTTGTATTCTCCCTGCTCGTCATGGCCCTCGTC
GGTAACATGATCGCTGAAGCTTTCGCCGGCAACCCAGCGACCGTAAACTACTCCATCTATACATCGGTCTTCTCG
ATGTTCACGCTGTTCTACCTGGTCCCGGCCTCGTTCAACATCGACTGGTCCGGCCACCCCCTCATCATGATCATC
ATCGACGCCCTGAACTGCATCTTCTTCTTCTGCGCTGCCATCGCGCTCGCGGCGAAGCTAGAGTGCCACTCTTGC
ACCAACCGCGAGTACCTTATCAACAATGAGATCACCAATGGCTCACACAACATGACCAAGCGTTGCCGTGAAGCC
CAGGCCTCCGTTGCTTTCCTTTGGTTCGCCTGGGCCGGCTACATGGCCTCCGTCATTGTCTCCGCCTTCATGGCC
CGTTCCTCTGCTGGTCCCTCGCGCCGTACTAGCCGTCGCGGCGGTGCCCGCCCCAACATGACCCAGGTTTAA
Transcript >Pro_DTO070G2_2|g241.t1
ATGGGTCTCAGAGGTGTGCAGCTCGGTCTCAGAGCCTGGGAGTTTGTATTCTCCCTGCTCGTCATGGCCCTCGTC
GGTAACATGATCGCTGAAGCTTTCGCCGGCAACCCAGCGACCGTAAACTACTCCATCTATACATCGGTCTTCTCG
ATGTTCACGCTGTTCTACCTGGTCCCGGCCTCGTTCAACATCGACTGGTCCGGCCACCCCCTCATCATGATCATC
ATCGACGCCCTGAACTGCATCTTCTTCTTCTGCGCTGCCATCGCGCTCGCGGCGAAGCTAGAGTGCCACTCTTGC
ACCAACCGCGAGTACCTTATCAACAATGAGATCACCAATGGCTCACACAACATGACCAAGCGTTGCCGTGAAGCC
CAGGCCTCCGTTGCTTTCCTTTGGTTCGCCTGGGCCGGCTACATGGCCTCCGTCATTGTCTCCGCCTTCATGGCC
CGTTCCTCTGCTGGTCCCTCGCGCCGTACTAGCCGTCGCGGCGGTGCCCGCCCCAACATGACCCAGGTTTAA
Gene >Pro_DTO070G2_2|g241.t1
ATGGGTCTCAGAGGTGTGCAGCTCGGTCTCAGAGCCTGGGAGGTGAGTGCAATTGCAATGCGACAGCTAGAAGCT
TAAAGCTTGAAGCTATAAGAATCCCAAGTTGAATATAGTACTGACCCATTACAGTTTGTATTCTCCCTGCTCGTC
ATGGCCCTCGTCGGTAACATGATCGCTGAAGCTTTCGCCGGCAACCCAGCGACCGTAAACTACTCCATCTATACA
TCGGTCTTCTCGATGTTCACGCTGTTCTACCTGGTCCCGGCCTCGTTCAACATCGACTGGTCCGGCCACCCCCTC
ATCATGATCATCATCGACGCCCTGAACTGCATCTTCTTCTTCTGCGCTGCCATCGCGCTCGCGGCGAAGCTAGAG
TGCCACTCTTGCACCAACCGCGTAAGTTGACTTGAATGGATTGCAAATATAAGACAAGAGAGCAAACGCTAACTC
CCTCTAGGAGTACCTTATCAACAATGAGATCACCAATGGCTCACACAACATGACCAAGCGTTGCCGTGAAGCCCA
GGCCTCCGTTGCTTTCCTTTGGTTCGCCTGGGCCGGCTACATGGCCTCCGTCATTGTCTCCGCCTTCATGGCCCG
TTCCTCTGCTGGTCCCTCGCGCCGTACTAGCCGTCGCGGCGGTGCCCGCCCCAACATGACCCAGGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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