Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g2380.t1
Gene name
Locationscaffold_02:1684755..1686002
Strand-
Gene length (bp)1247
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain 4.4E-28 97 240
PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain 6.0E-24 65 362

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003899 DNA-directed 5'-3' RNA polymerase activity Yes
GO:0005515 protein binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0008152 metabolic process No
GO:0016740 transferase activity No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0009987 cellular process No
GO:0016779 nucleotidyltransferase activity No
GO:0006807 nitrogen compound metabolic process No
GO:0009058 biosynthetic process No
GO:0046483 heterocycle metabolic process No
GO:0034062 5'-3' RNA polymerase activity No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0090304 nucleic acid metabolic process No
GO:0032774 RNA biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0044238 primary metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0003824 catalytic activity No
GO:0016070 RNA metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0097747 RNA polymerase activity No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0140098 catalytic activity, acting on RNA No
GO:0008150 biological_process No
GO:0044237 cellular metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0044249 cellular biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup2839
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g3282.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g7822.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g7681.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g8633.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g8776.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g3463.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g2243.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g615.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1765.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g4457.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g589.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g4925.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g1091.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g8450.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g6348.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g4241.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g7049.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g3465.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g2380.t1 (this protein)
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g6337.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g4414.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g1367.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5510.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g349.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g2892.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g8014.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g8991.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g2072.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g4964.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g1731.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g794.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g8245.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g615.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g5823.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g2380.t1
MAPLVPSQEELQRRRIIGINAETVTNIPSTDFPGHWPGESHGWALDEFKENFQVEFHRNDRFEASFSLIGLDASV
ANAFRRILMAEIPTIAIEDCFIHNNTSVIQDEVLAQRLGLIPLKGSVEGINWMHWYKKASEDGTEEEDGPCDFNT
IVLRLDVECYKNEYADKDEQDPRKLYTNAHVYAKDLMYMPVGRQEQFFVGDGAIAPVNPDILIAKLRPGQKIEME
LHCQKGIGADHAKFSPVATASYRLLPEIKIERPIIGEDAKKFAKCFPKGVIGIEPVTPEEAAQRGSGYEGHAGEQ
KAVVKDAFNDTVSRECLRHDEFKDKVKLGRVRDHFIFSVESTGQFESDMLFLEAVKVMKLKCNRWKRGLTDLMA*
Coding >Pro_DTO070G2_2|g2380.t1
ATGGCGCCTCTTGTTCCCTCGCAGGAGGAGCTGCAGCGCCGCCGTATCATCGGCATCAATGCGGAAACCGTCACC
AACATCCCCTCTACAGATTTTCCTGGTCACTGGCCCGGAGAGTCGCATGGGTGGGCACTCGATGAATTCAAGGAG
AATTTCCAAGTCGAATTCCATCGCAATGACCGGTTCGAGGCTTCCTTCTCGCTGATCGGTCTCGACGCCTCAGTC
GCCAACGCTTTCCGTCGTATTCTTATGGCCGAAATCCCCACCATCGCCATTGAAGACTGCTTCATTCACAACAAC
ACTTCAGTCATTCAAGACGAAGTGCTCGCACAACGACTGGGCCTGATCCCGCTCAAGGGTTCTGTCGAGGGTATC
AACTGGATGCACTGGTATAAGAAGGCGTCCGAAGACGGTACCGAGGAGGAAGACGGCCCCTGCGACTTCAACACC
ATTGTGCTCCGTCTCGACGTGGAATGCTACAAGAACGAATACGCAGACAAGGACGAGCAGGACCCCCGCAAGCTG
TACACCAACGCCCATGTTTACGCCAAGGACCTCATGTACATGCCTGTCGGTCGTCAGGAACAATTTTTTGTCGGC
GACGGCGCTATCGCACCTGTCAACCCAGACATTCTGATCGCCAAGCTCCGTCCCGGCCAGAAGATCGAGATGGAA
CTCCACTGCCAAAAGGGTATTGGTGCCGATCACGCCAAGTTCTCGCCTGTGGCTACCGCTTCATACCGTCTCTTG
CCTGAAATTAAGATCGAGCGTCCAATCATTGGCGAGGATGCGAAGAAGTTCGCCAAGTGCTTCCCTAAGGGTGTG
ATTGGTATTGAGCCCGTCACCCCTGAAGAGGCCGCGCAGCGTGGAAGTGGATACGAGGGCCATGCCGGCGAGCAG
AAGGCTGTCGTGAAGGATGCGTTTAATGATACTGTCAGCAGAGAGTGTCTGCGCCACGATGAGTTCAAGGATAAG
GTCAAGCTGGGACGGGTGCGTGATCACTTCATCTTCAGCGTGGAGAGCACCGGTCAATTTGAGAGTGACATGCTC
TTCCTGGAGGCTGTAAAGGTTATGAAGCTGAAGTGCAACCGGTGGAAGAGGGGTCTGACCGATTTGATGGCTTGA
Transcript >Pro_DTO070G2_2|g2380.t1
ATGGCGCCTCTTGTTCCCTCGCAGGAGGAGCTGCAGCGCCGCCGTATCATCGGCATCAATGCGGAAACCGTCACC
AACATCCCCTCTACAGATTTTCCTGGTCACTGGCCCGGAGAGTCGCATGGGTGGGCACTCGATGAATTCAAGGAG
AATTTCCAAGTCGAATTCCATCGCAATGACCGGTTCGAGGCTTCCTTCTCGCTGATCGGTCTCGACGCCTCAGTC
GCCAACGCTTTCCGTCGTATTCTTATGGCCGAAATCCCCACCATCGCCATTGAAGACTGCTTCATTCACAACAAC
ACTTCAGTCATTCAAGACGAAGTGCTCGCACAACGACTGGGCCTGATCCCGCTCAAGGGTTCTGTCGAGGGTATC
AACTGGATGCACTGGTATAAGAAGGCGTCCGAAGACGGTACCGAGGAGGAAGACGGCCCCTGCGACTTCAACACC
ATTGTGCTCCGTCTCGACGTGGAATGCTACAAGAACGAATACGCAGACAAGGACGAGCAGGACCCCCGCAAGCTG
TACACCAACGCCCATGTTTACGCCAAGGACCTCATGTACATGCCTGTCGGTCGTCAGGAACAATTTTTTGTCGGC
GACGGCGCTATCGCACCTGTCAACCCAGACATTCTGATCGCCAAGCTCCGTCCCGGCCAGAAGATCGAGATGGAA
CTCCACTGCCAAAAGGGTATTGGTGCCGATCACGCCAAGTTCTCGCCTGTGGCTACCGCTTCATACCGTCTCTTG
CCTGAAATTAAGATCGAGCGTCCAATCATTGGCGAGGATGCGAAGAAGTTCGCCAAGTGCTTCCCTAAGGGTGTG
ATTGGTATTGAGCCCGTCACCCCTGAAGAGGCCGCGCAGCGTGGAAGTGGATACGAGGGCCATGCCGGCGAGCAG
AAGGCTGTCGTGAAGGATGCGTTTAATGATACTGTCAGCAGAGAGTGTCTGCGCCACGATGAGTTCAAGGATAAG
GTCAAGCTGGGACGGGTGCGTGATCACTTCATCTTCAGCGTGGAGAGCACCGGTCAATTTGAGAGTGACATGCTC
TTCCTGGAGGCTGTAAAGGTTATGAAGCTGAAGTGCAACCGGTGGAAGAGGGGTCTGACCGATTTGATGGCTTGA
Gene >Pro_DTO070G2_2|g2380.t1
ATGGCGCCTCTTGTTCCCTCGCAGGAGGAGCTGCAGCGCCGCCGTGTATGTCTCCAACAATGATTCCACGCAGCT
CAGAATACTAATCGTCCCAGATCATCGGCATCAATGCGGAAACCGTCACCAACATCCCCTCTACAGATTTTCCTG
GTCACTGGCCCGGAGAGTCGCATGGGTGGGCACTCGATGAATTCAAGGAGGTATGTATTGGAACATAGTTAGGAA
GGTATACTCTACTGGATTTAGTAAATCCTGACCATTTACTCCAACAGAATTTCCAAGTCGAATTCCATCGCAATG
ACCGGTTCGAGGCTTCCTTCTCGCTGATCGGTCTCGACGCCTCAGTCGCCAACGCTTTCCGTCGTATTCTTATGG
CCGAAATCCCCACCATCGCCATTGAAGACTGCTTCATTCACAACAACACTTCAGTCATTCAAGACGAAGTGCTCG
CACAACGACTGGGCCTGATCCCGCTCAAGGGTTCTGTCGAGGGTATCAACTGGATGCACTGGTATAAGAAGGCGT
CCGAAGACGGTACCGAGGAGGAAGACGGCCCCTGCGACTTCAACACCATTGTGCTCCGTCTCGACGTGGAATGCT
ACAAGAACGAATACGCAGACAAGGACGAGCAGGACCCCCGCAAGCTGTACACCAACGCCCATGTTTACGCCAAGG
ACCTCATGTACATGCCTGTCGGTCGTCAGGAACAATTTTTTGTCGGCGACGGCGCTATCGCACCTGTCAACCCAG
ACATTCTGATCGCCAAGCTCCGTCCCGGCCAGAAGATCGAGATGGAACTCCACTGCCAAAAGGGTATTGGTGCCG
ATCACGCCAAGTTCTCGCCTGTGGCTACCGCTTCATACCGTCTCTTGCCTGAAATTAAGATCGAGCGTCCAATCA
TTGGCGAGGATGCGAAGAAGTTCGCCAAGTGCTTCCCTAAGGGTGTGATTGGTATTGAGCCCGTCACCCCTGAAG
AGGCCGCGCAGCGTGGAAGTGGATACGAGGGCCATGCCGGCGAGCAGAAGGCTGTCGTGAAGGATGCGTTTAATG
ATACTGTCAGCAGAGAGTGTCTGCGCCACGATGAGTTCAAGGATAAGGTCAAGCTGGGACGGGTGCGTGATCACT
TCATCTTCAGCGTGGAGAGCACCGGTCAATTTGAGAGTGACATGCTCTTCCTGGAGGCTGTAAAGGTTATGAAGC
TGAAGTGCAACCGGTGGAAGAGGGGTCTGACCGATTTGATGGCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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