© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g2073.t1 |
| Gene name | |
| Location | scaffold_02:810984..811803 |
| Strand | - |
| Gene length (bp) | 819 |
| Transcript length (bp) | 819 |
| Coding sequence length (bp) | 819 |
| Protein length (aa) | 273 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12138 | Spherulin4 | Spherulation-specific family 4 | 1.5E-47 | 23 | 249 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH135 | 1.6E-55 | 23 | 245 |
| Orthofinder run ID | 2 |
| Orthogroup | 2497 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g2073.t1 MFQLLSVIATLFTLASTAISTGLLVPLYAWPGTDKWNTLYDSIAAHPSIPFYLIINPSTGPGDTEYPEDVFITAI AKLNSYPNTKILGYTYTNQGTRDSSEVEKDIAIYAKWASYAGQNITLSGTFFDEAANGEDPSKLAYFENLSRKSK SGNLTTVIFNPGVKLVADVAKWFAAADFIVEYENTYASWVASAPDDRFSTPDNYGRDAVILNQTPEDANIDNVVR LAKDMGLGAIYLASDDNYMNLTTVTKVAGAVAQNQIVRRRGYRRFQS* |
| Coding | >Pro_DTO070G2_2|g2073.t1 ATGTTTCAATTACTTTCTGTGATAGCTACTCTGTTTACACTAGCCTCAACTGCCATATCGACCGGCCTACTAGTA CCACTATACGCCTGGCCCGGAACAGACAAATGGAATACACTCTACGACTCAATTGCAGCCCATCCATCAATCCCA TTCTACTTGATCATCAACCCGTCCACGGGTCCTGGTGACACAGAATACCCAGAAGACGTCTTCATAACCGCCATC GCCAAGCTAAACAGCTATCCCAACACGAAAATACTAGGATACACCTACACAAACCAAGGAACGCGAGACAGCTCC GAAGTCGAAAAGGACATCGCTATCTACGCTAAATGGGCCAGCTATGCAGGGCAGAATATCACTCTCTCCGGGACC TTCTTCGACGAGGCAGCGAACGGCGAAGATCCGAGCAAGCTCGCCTATTTCGAGAACCTCTCTCGGAAATCTAAG AGCGGTAACTTGACCACCGTTATCTTCAACCCTGGTGTCAAGCTCGTGGCAGATGTTGCCAAGTGGTTCGCGGCA GCGGACTTCATTGTGGAGTATGAGAATACTTATGCTAGTTGGGTGGCTTCGGCTCCTGATGATCGCTTCTCGACG CCTGATAACTATGGAAGGGATGCTGTTATCTTGAATCAGACGCCCGAAGATGCCAATATTGATAATGTTGTTCGG TTGGCGAAGGATATGGGCCTCGGTGCTATATATCTGGCTTCGGATGATAATTATATGAATCTCACCACTGTGACT AAGGTTGCAGGTGCTGTCGCACAAAATCAGATTGTTAGGCGCAGGGGGTACCGTCGGTTTCAGAGCTGA |
| Transcript | >Pro_DTO070G2_2|g2073.t1 ATGTTTCAATTACTTTCTGTGATAGCTACTCTGTTTACACTAGCCTCAACTGCCATATCGACCGGCCTACTAGTA CCACTATACGCCTGGCCCGGAACAGACAAATGGAATACACTCTACGACTCAATTGCAGCCCATCCATCAATCCCA TTCTACTTGATCATCAACCCGTCCACGGGTCCTGGTGACACAGAATACCCAGAAGACGTCTTCATAACCGCCATC GCCAAGCTAAACAGCTATCCCAACACGAAAATACTAGGATACACCTACACAAACCAAGGAACGCGAGACAGCTCC GAAGTCGAAAAGGACATCGCTATCTACGCTAAATGGGCCAGCTATGCAGGGCAGAATATCACTCTCTCCGGGACC TTCTTCGACGAGGCAGCGAACGGCGAAGATCCGAGCAAGCTCGCCTATTTCGAGAACCTCTCTCGGAAATCTAAG AGCGGTAACTTGACCACCGTTATCTTCAACCCTGGTGTCAAGCTCGTGGCAGATGTTGCCAAGTGGTTCGCGGCA GCGGACTTCATTGTGGAGTATGAGAATACTTATGCTAGTTGGGTGGCTTCGGCTCCTGATGATCGCTTCTCGACG CCTGATAACTATGGAAGGGATGCTGTTATCTTGAATCAGACGCCCGAAGATGCCAATATTGATAATGTTGTTCGG TTGGCGAAGGATATGGGCCTCGGTGCTATATATCTGGCTTCGGATGATAATTATATGAATCTCACCACTGTGACT AAGGTTGCAGGTGCTGTCGCACAAAATCAGATTGTTAGGCGCAGGGGGTACCGTCGGTTTCAGAGCTGA |
| Gene | >Pro_DTO070G2_2|g2073.t1 ATGTTTCAATTACTTTCTGTGATAGCTACTCTGTTTACACTAGCCTCAACTGCCATATCGACCGGCCTACTAGTA CCACTATACGCCTGGCCCGGAACAGACAAATGGAATACACTCTACGACTCAATTGCAGCCCATCCATCAATCCCA TTCTACTTGATCATCAACCCGTCCACGGGTCCTGGTGACACAGAATACCCAGAAGACGTCTTCATAACCGCCATC GCCAAGCTAAACAGCTATCCCAACACGAAAATACTAGGATACACCTACACAAACCAAGGAACGCGAGACAGCTCC GAAGTCGAAAAGGACATCGCTATCTACGCTAAATGGGCCAGCTATGCAGGGCAGAATATCACTCTCTCCGGGACC TTCTTCGACGAGGCAGCGAACGGCGAAGATCCGAGCAAGCTCGCCTATTTCGAGAACCTCTCTCGGAAATCTAAG AGCGGTAACTTGACCACCGTTATCTTCAACCCTGGTGTCAAGCTCGTGGCAGATGTTGCCAAGTGGTTCGCGGCA GCGGACTTCATTGTGGAGTATGAGAATACTTATGCTAGTTGGGTGGCTTCGGCTCCTGATGATCGCTTCTCGACG CCTGATAACTATGGAAGGGATGCTGTTATCTTGAATCAGACGCCCGAAGATGCCAATATTGATAATGTTGTTCGG TTGGCGAAGGATATGGGCCTCGGTGCTATATATCTGGCTTCGGATGATAATTATATGAATCTCACCACTGTGACT AAGGTTGCAGGTGCTGTCGCACAAAATCAGATTGTTAGGCGCAGGGGGTACCGTCGGTTTCAGAGCTGA |