© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO070G2_2|g204.t1 |
| Gene name | |
| Location | scaffold_01:535372..536679 |
| Strand | + |
| Gene length (bp) | 1307 |
| Transcript length (bp) | 900 |
| Coding sequence length (bp) | 900 |
| Protein length (aa) | 300 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12138 | Spherulin4 | Spherulation-specific family 4 | 5.2E-75 | 54 | 296 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g204.t1 MSTEKHVSNRTCLKSKLSRFILAIVVLIVIIVAVVPSVVVTTLHKKNSMGPKAKVFVPLYVYPAPEAWAPLENVI SAHPDVNFTVVINPGNGPGPDSLPDGNYTREIPKLTAYDNVRVLGYVYTSYGKRNASEVRKDIQTYADWPTNSSD PNLAVRGIFFDETPQQYEAQTLTYLQGLTDFVKGLKALGPDQFVVHNPGAVPDSRYLATADSTVVFEAAYSTFRE RQGAKLFSSISDSNRTQLCAIVHSVPESVEGKDLRSLVKQVRKVADEIYITHLSTNYYASFGSKWTEFVDLMAA* |
| Coding | >Pro_DTO070G2_2|g204.t1 ATGTCTACTGAGAAACACGTGAGCAACCGGACGTGCCTGAAGTCGAAGTTGTCTCGTTTCATCTTGGCAATTGTG GTCCTGATTGTGATTATTGTCGCCGTTGTCCCCTCCGTTGTGGTCACTACCCTCCACAAGAAAAATAGCATGGGT CCGAAGGCGAAGGTGTTCGTTCCACTCTACGTATACCCTGCTCCTGAGGCGTGGGCTCCGCTGGAAAATGTGATA TCCGCCCACCCCGATGTCAACTTTACCGTCGTAATCAATCCAGGAAACGGTCCCGGCCCTGACTCTCTCCCGGAT GGCAATTACACGCGCGAGATCCCCAAACTCACTGCGTACGATAATGTGCGGGTGTTGGGCTATGTGTATACCTCC TACGGAAAGCGCAATGCTTCTGAGGTTCGCAAGGATATTCAGACCTATGCGGACTGGCCGACTAATTCCTCCGAC CCCAACCTTGCGGTTCGCGGAATCTTCTTCGATGAAACTCCTCAACAATACGAAGCTCAAACCTTGACGTATCTG CAAGGGCTCACAGATTTCGTTAAGGGTCTCAAGGCTCTTGGCCCTGATCAATTTGTTGTCCATAACCCCGGCGCT GTCCCGGATTCTCGGTACCTGGCTACAGCTGATTCAACCGTTGTGTTCGAAGCCGCCTACAGCACGTTCCGGGAA CGGCAAGGTGCTAAGCTGTTCAGCAGCATCTCGGACAGCAATCGTACCCAACTTTGCGCCATCGTTCACTCGGTG CCTGAGTCGGTCGAGGGCAAGGATCTTCGCAGTCTGGTCAAGCAGGTGCGAAAGGTCGCGGATGAGATCTACATC ACCCATCTGAGCACGAACTATTATGCCTCCTTTGGGTCTAAGTGGACTGAGTTCGTCGACCTGATGGCAGCTTAG |
| Transcript | >Pro_DTO070G2_2|g204.t1 ATGTCTACTGAGAAACACGTGAGCAACCGGACGTGCCTGAAGTCGAAGTTGTCTCGTTTCATCTTGGCAATTGTG GTCCTGATTGTGATTATTGTCGCCGTTGTCCCCTCCGTTGTGGTCACTACCCTCCACAAGAAAAATAGCATGGGT CCGAAGGCGAAGGTGTTCGTTCCACTCTACGTATACCCTGCTCCTGAGGCGTGGGCTCCGCTGGAAAATGTGATA TCCGCCCACCCCGATGTCAACTTTACCGTCGTAATCAATCCAGGAAACGGTCCCGGCCCTGACTCTCTCCCGGAT GGCAATTACACGCGCGAGATCCCCAAACTCACTGCGTACGATAATGTGCGGGTGTTGGGCTATGTGTATACCTCC TACGGAAAGCGCAATGCTTCTGAGGTTCGCAAGGATATTCAGACCTATGCGGACTGGCCGACTAATTCCTCCGAC CCCAACCTTGCGGTTCGCGGAATCTTCTTCGATGAAACTCCTCAACAATACGAAGCTCAAACCTTGACGTATCTG CAAGGGCTCACAGATTTCGTTAAGGGTCTCAAGGCTCTTGGCCCTGATCAATTTGTTGTCCATAACCCCGGCGCT GTCCCGGATTCTCGGTACCTGGCTACAGCTGATTCAACCGTTGTGTTCGAAGCCGCCTACAGCACGTTCCGGGAA CGGCAAGGTGCTAAGCTGTTCAGCAGCATCTCGGACAGCAATCGTACCCAACTTTGCGCCATCGTTCACTCGGTG CCTGAGTCGGTCGAGGGCAAGGATCTTCGCAGTCTGGTCAAGCAGGTGCGAAAGGTCGCGGATGAGATCTACATC ACCCATCTGAGCACGAACTATTATGCCTCCTTTGGGTCTAAGTGGACTGAGTTCGTCGACCTGATGGCAGCTTAG |
| Gene | >Pro_DTO070G2_2|g204.t1 ATGTCTACTGAGAAACACGTGAGCAACCGGACGTGCCTGAAGTCGAAGTTGTCTCGTTTCATCTTGGCAATTGTG GTCCTGATTGTGATTATTGTCGCCGTTGTCCCCTCCGTTGTGGTCACTACCCTCCACAAGAAAAATAGCATGGGT CCGAAGGCGAAGGTGTTCGTTCCACTCTACGTATACCCTGCTCCTGAGGCGTGGGCTCCGCTGGAAAATGTGTAT GTTTCTAAACCCTTTTTATCCTTTCTTTTCTCTCCCCAAATTGCTATCCTGGTAGCCAGCCACATTATGCTGCGC CGTTATATACAAATTAGAAAAGAAAGGAAAAATACAGAAAAACAGTCGCTGAACGCCACAGGATATCCGCCCACC CCGATGTCAACTTTACCGTCGTAATCAATCCAGGAAACGGTCCCGGCCCTGACTCTCTCCCGGATGGCAATTACA CGCGCGAGATCCCCAAACTCACTGCGTACGATAATGTGCGGGTGTTGGGCTATGTGTATACCTCCTACGGAAAGC GCAATGCTTCTGAGGTTCGCAAGGATATTCAGACCTATGCGGACTGGCCGACTAATTCCTCCGACCCCAACCTTG CGGTTCGCGGAATCTTCTTCGATGAAACTCCTCAACAATACGAAGCTCAAACCTTGACGTATCTGCAAGGGCTCA CAGATTTCGTTAAGGGTCTCAAGGCTCTTGGCCCTGATCAATTTGTGAGTACTGTAATGTTTTTACTTTACACTT ATGGACTGCCCCATACCATACCACCCCTGTCTCGCATCATCGTCGCCCTATATCTGCGTTTCTTTATTTGTTTTA TCTGTTTTTCCGTTTTCCCTCCCGTCGGGCCATGCACAAGCCACACTTTGGCTCTATTGAATTCTATTCCAACGC CGCATATTCCACCCCGGCCTGCATCACCATGTGTTCCCCATCTGGGATACATAGGCGAAGTCCATTGAGCTAACA AAAACTATCAGGTTGTCCATAACCCCGGCGCTGTCCCGGATTCTCGGTACCTGGCTACAGCTGATTCAACCGTTG TGTTCGAAGCCGCCTACAGCACGTTCCGGGAACGGCAAGGTGCTAAGCTGTTCAGCAGCATCTCGGACAGCAATC GTACCCAACTTTGCGCCATCGTTCACTCGGTGCCTGAGTCGGTCGAGGGCAAGGATCTTCGCAGTCTGGTCAAGC AGGTGCGAAAGGTCGCGGATGAGATCTACATCACCCATCTGAGCACGAACTATTATGCCTCCTTTGGGTCTAAGT GGACTGAGTTCGTCGACCTGATGGCAGCTTAG |