© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g2027.t1 |
| Gene name | |
| Location | scaffold_02:710583..712400 |
| Strand | - |
| Gene length (bp) | 1817 |
| Transcript length (bp) | 1554 |
| Coding sequence length (bp) | 1554 |
| Protein length (aa) | 518 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04163 | Tht1 | Tht1-like nuclear fusion protein | 4.9E-06 | 166 | 214 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0048288 | nuclear membrane fusion involved in karyogamy | Yes |
| GO:0000742 | karyogamy involved in conjugation with cellular fusion | Yes |
| GO:0006997 | nucleus organization | No |
| GO:0061025 | membrane fusion | No |
| GO:0022414 | reproductive process | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0016043 | cellular component organization | No |
| GO:0061024 | membrane organization | No |
| GO:0006996 | organelle organization | No |
| GO:0000740 | nuclear membrane fusion | No |
| GO:0009987 | cellular process | No |
| GO:0071763 | nuclear membrane organization | No |
| GO:0000741 | karyogamy | No |
| GO:0048284 | organelle fusion | No |
| GO:0090174 | organelle membrane fusion | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 467 | 489 | 22 |
| 2 | 496 | 514 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g2027.t1 MRATDRFQVIAYIFLALTHLGRASVSQHNVPILATRPPDIDTVSFLSSRAQDQDSIFNEAVKILDSMQSSPSCNR LAATKLVNSCQTFSDGKDGTQTDNPETLDVLRSVYAVRLALCEIDGAGTQMPPSCLPVTVSPPPQKNRFGFVSRH RGPDPMSDEVPKELLEQCLRTLESRPQWWTSYSNSRQNALVICHASRIETEKEELIELQRSIAKSSLKLNNGLQE ALRNAIAQSAQQQSFIHALQSLQGKIVTDMEATDSVFKRTFGKFLREIEAGIWSLQDSISEALSNVRAGTGVLEG DIRNLSTQVGALQQALRSAHQDAMTRSRETLLAQETNVVAQKNLASSLHLSLESLLDSDMDKLYQGMQRFDAAME WLASRMNMILEQETRMTERLQNMETFIQRSESKASELQKAQDQQTEALSAQSRAQEAIQFDAQVSQALLAKTSVA AANLQSVIDDAALKFKHVPGFGIGGSSAWSICAVLLIVLAAQNLKIAIALIFLILGHSVALIIFKFL* |
| Coding | >Pro_DTO070G2_2|g2027.t1 ATGAGGGCAACCGATCGCTTCCAAGTGATTGCATATATCTTCCTGGCACTTACACACCTCGGTCGAGCAAGTGTC TCCCAACACAATGTCCCAATTCTTGCAACCAGACCACCGGACATCGACACGGTCTCTTTCCTCAGTTCCCGGGCG CAAGACCAAGACAGCATCTTCAACGAAGCCGTCAAAATCCTGGACTCGATGCAATCTTCACCCTCGTGCAACCGG CTTGCAGCGACAAAACTAGTGAACTCGTGCCAAACATTCAGCGATGGCAAGGACGGCACGCAGACGGATAACCCA GAGACTCTCGACGTTCTACGATCCGTCTATGCAGTACGCCTGGCATTGTGTGAGATCGACGGTGCTGGTACCCAA ATGCCTCCCTCGTGCCTCCCTGTTACTGTCTCGCCACCTCCACAGAAGAATCGATTTGGCTTTGTGAGTCGACAC AGAGGCCCCGACCCCATGTCGGATGAAGTTCCAAAAGAATTATTGGAGCAATGTCTGAGGACACTTGAGTCACGA CCCCAGTGGTGGACCTCTTACAGCAACAGCCGACAGAATGCTCTTGTGATCTGCCATGCCTCGCGAATCGAGACG GAGAAAGAGGAGCTTATTGAGCTTCAACGATCCATTGCCAAGAGCAGTCTCAAGCTCAACAATGGGCTTCAAGAG GCGTTGCGAAATGCAATTGCACAGTCTGCGCAGCAGCAATCATTCATACATGCTCTTCAGTCTCTGCAAGGGAAG ATCGTGACCGATATGGAAGCGACAGACTCTGTGTTCAAACGAACATTCGGCAAATTCCTTCGAGAAATCGAAGCT GGAATCTGGTCGCTGCAAGATTCTATATCTGAGGCTTTGTCGAATGTGCGGGCTGGAACTGGGGTCCTCGAAGGG GATATCCGGAACTTATCTACTCAAGTTGGAGCACTTCAACAGGCTCTACGGAGTGCACATCAAGATGCAATGACT AGAAGCCGAGAGACGTTGCTAGCTCAAGAAACCAATGTTGTCGCCCAGAAGAATCTCGCATCATCTTTACACCTG TCGCTCGAGTCACTTCTGGACTCAGACATGGACAAACTGTACCAAGGCATGCAGAGATTCGATGCTGCTATGGAA TGGTTGGCCAGCCGGATGAACATGATTCTTGAGCAAGAAACCAGGATGACAGAGCGACTTCAAAACATGGAAACC TTTATACAAAGATCCGAATCGAAGGCAAGCGAGCTACAAAAGGCGCAGGACCAACAAACAGAAGCACTATCTGCC CAATCGCGGGCCCAGGAGGCCATTCAATTCGATGCGCAAGTGTCGCAAGCTTTGCTGGCCAAAACTAGTGTTGCT GCTGCCAATTTACAATCCGTCATCGACGATGCAGCGTTAAAGTTCAAGCATGTCCCGGGTTTCGGCATTGGGGGA TCCTCGGCATGGTCTATCTGCGCCGTCCTACTCATCGTCCTTGCCGCCCAGAACCTTAAGATTGCAATTGCTTTA ATTTTTCTCATTTTGGGCCATTCTGTTGCCCTTATTATCTTCAAATTTCTCTAG |
| Transcript | >Pro_DTO070G2_2|g2027.t1 ATGAGGGCAACCGATCGCTTCCAAGTGATTGCATATATCTTCCTGGCACTTACACACCTCGGTCGAGCAAGTGTC TCCCAACACAATGTCCCAATTCTTGCAACCAGACCACCGGACATCGACACGGTCTCTTTCCTCAGTTCCCGGGCG CAAGACCAAGACAGCATCTTCAACGAAGCCGTCAAAATCCTGGACTCGATGCAATCTTCACCCTCGTGCAACCGG CTTGCAGCGACAAAACTAGTGAACTCGTGCCAAACATTCAGCGATGGCAAGGACGGCACGCAGACGGATAACCCA GAGACTCTCGACGTTCTACGATCCGTCTATGCAGTACGCCTGGCATTGTGTGAGATCGACGGTGCTGGTACCCAA ATGCCTCCCTCGTGCCTCCCTGTTACTGTCTCGCCACCTCCACAGAAGAATCGATTTGGCTTTGTGAGTCGACAC AGAGGCCCCGACCCCATGTCGGATGAAGTTCCAAAAGAATTATTGGAGCAATGTCTGAGGACACTTGAGTCACGA CCCCAGTGGTGGACCTCTTACAGCAACAGCCGACAGAATGCTCTTGTGATCTGCCATGCCTCGCGAATCGAGACG GAGAAAGAGGAGCTTATTGAGCTTCAACGATCCATTGCCAAGAGCAGTCTCAAGCTCAACAATGGGCTTCAAGAG GCGTTGCGAAATGCAATTGCACAGTCTGCGCAGCAGCAATCATTCATACATGCTCTTCAGTCTCTGCAAGGGAAG ATCGTGACCGATATGGAAGCGACAGACTCTGTGTTCAAACGAACATTCGGCAAATTCCTTCGAGAAATCGAAGCT GGAATCTGGTCGCTGCAAGATTCTATATCTGAGGCTTTGTCGAATGTGCGGGCTGGAACTGGGGTCCTCGAAGGG GATATCCGGAACTTATCTACTCAAGTTGGAGCACTTCAACAGGCTCTACGGAGTGCACATCAAGATGCAATGACT AGAAGCCGAGAGACGTTGCTAGCTCAAGAAACCAATGTTGTCGCCCAGAAGAATCTCGCATCATCTTTACACCTG TCGCTCGAGTCACTTCTGGACTCAGACATGGACAAACTGTACCAAGGCATGCAGAGATTCGATGCTGCTATGGAA TGGTTGGCCAGCCGGATGAACATGATTCTTGAGCAAGAAACCAGGATGACAGAGCGACTTCAAAACATGGAAACC TTTATACAAAGATCCGAATCGAAGGCAAGCGAGCTACAAAAGGCGCAGGACCAACAAACAGAAGCACTATCTGCC CAATCGCGGGCCCAGGAGGCCATTCAATTCGATGCGCAAGTGTCGCAAGCTTTGCTGGCCAAAACTAGTGTTGCT GCTGCCAATTTACAATCCGTCATCGACGATGCAGCGTTAAAGTTCAAGCATGTCCCGGGTTTCGGCATTGGGGGA TCCTCGGCATGGTCTATCTGCGCCGTCCTACTCATCGTCCTTGCCGCCCAGAACCTTAAGATTGCAATTGCTTTA ATTTTTCTCATTTTGGGCCATTCTGTTGCCCTTATTATCTTCAAATTTCTCTAG |
| Gene | >Pro_DTO070G2_2|g2027.t1 ATGAGGGCAACCGATCGCTTCCAAGTGATTGCATATATCTTCCTGGCACTTACACACCTCGGTCGAGCAAGTGTC TCCCAACACAGTAAGCCACTCAGATACGTCTCAAATCATTTTACTGACATAAGAAGATGTCCCAATTCTTGCAAC CAGACCACCGGACATCGACACGGTCTCTTTCCTCAGTTCCCGGGCGCAAGACCAAGACAGCATCTTCAACGAAGC CGTCAAAATCCTGGACTCGATGCAATCTTCACCCTCGTGCAACCGGCTTGCAGCGACAAAACTAGTGAACTCGTG CCAAACATTCAGCGATGGCAAGGACGGCACGCAGACGGATAACCCAGAGACTCTCGACGTTCTACGATCCGTCTA TGCAGTACGCCTGGCATTGTGTGAGATCGACGGTGCTGGTACCCAAATGCCTCCCTCGTGCCTCCCTGTTACTGT CTCGCCACCTCCACAGAAGAATCGATTTGGCTTTGTGAGTCGACACAGAGGCCCCGACCCCATGTCGGATGAAGT TCCAAAAGAATTATTGGAGCAATGTCTGAGGACACTTGAGTCACGACCCCAGTGGTGGACCTCTTACAGCAACAG CCGACAGAATGCTCTTGTGATCTGCCATGCCTCGCGAATCGAGACGGAGAAAGAGGAGCTTATTGAGCTTCAACG ATCCATTGCCAAGAGCAGTCTCAAGCTCAACAATGGGCTTCAAGAGGCGTTGCGAAATGCAATTGCACAGTCTGC GCAGCAGCAATCATTCATACATGCTCTTCAGTCTCTGCAAGGGAAGATCGTGACCGATATGGAAGCGACAGACTC TGTGTTCAAACGAACATTCGGCAAATTCCTTCGAGAAATCGAAGCTGGAATCTGGTCGCTGCAAGATTCTATATC TGAGGCTTTGTCGAATGTGCGGGCTGGAACTGGGGTCCTCGAAGGGGTACAATTCGAGCAGCTGAATGAGTTGAA ACATGTACTAAAATTTCAACCAGGATATCCGGAACTTATCTACTCAAGTTGGAGCACTTCAACAGGCTCTACGGA GTGCACATCAAGATGCAATGACTAGAAGCCGAGAGACGTTGCTAGCTCAAGAAACCAATGTTGTCGCCCAGAAGA ATCTCGCATCATCTTTACACCTGTCGCTCGAGTCACTTCTGGACTCAGACATGGACAAACTGTACCAAGGCATGC AGAGATTCGATGCTGCTATGGTGTGTGAAATATACATTTACCATGTAGTGACACTATGAGACTAATCTCTTGCCC CTTTTTGTAGGAATGGTTGGCCAGCCGGATGAACATGATTCTTGAGCAAGAAACCAGGATGACAGAGGTACGAGT ACATTCCTACATACCGGCTTTCTCACTGACTTTGAAAGCGACTTCAAAACATGGAAACCTTTATACAAAGATCCG AATCGAAGGCAAGCGAGCTACAAAAGGCGCAGGACCAACAAACAGAAGCACTATCTGCCCAATCGCGGGCCCAGG AGGCCATTCAATTCGATGCGCAAGTGTCGCAAGCTTTGCTGGCCAAAACTAGTGTTGCTGCTGCCAATTTACAAT CCGTCATCGACGATGCAGCGTTAAAGTTCAAGCATGTCCCGGGTTTCGGCATTGGGGGATCCTCGGCATGGTCTA TCTGCGCCGTCCTACTCATCGTCCTTGCCGCCCAGAACCTTAAGATTGCAATTGCTTTAATTTTTCTCATTTTGG GTAGGTGTGTTCTTCATGATCAAGAGTGATTGGTGCTAATATAAGGAGGATTAGGCCATTCTGTTGCCCTTATTA TCTTCAAATTTCTCTAG |