© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g1914.t1 |
| Gene name | |
| Location | scaffold_02:400391..401439 |
| Strand | + |
| Gene length (bp) | 1048 |
| Transcript length (bp) | 993 |
| Coding sequence length (bp) | 993 |
| Protein length (aa) | 331 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05368 | NmrA | NmrA-like family | 3.0E-15 | 8 | 245 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.6E-10 | 12 | 219 |
| PF01113 | DapB_N | Dihydrodipicolinate reductase, N-terminus | 1.4E-05 | 7 | 81 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009089 | lysine biosynthetic process via diaminopimelate | Yes |
| GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | Yes |
| GO:0046394 | carboxylic acid biosynthetic process | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0006520 | cellular amino acid metabolic process | No |
| GO:0008652 | cellular amino acid biosynthetic process | No |
| GO:0016053 | organic acid biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | No |
| GO:0009058 | biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0046451 | diaminopimelate metabolic process | No |
| GO:0019752 | carboxylic acid metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0009067 | aspartate family amino acid biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901605 | alpha-amino acid metabolic process | No |
| GO:0009066 | aspartate family amino acid metabolic process | No |
| GO:0043648 | dicarboxylic acid metabolic process | No |
| GO:1901607 | alpha-amino acid biosynthetic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0006553 | lysine metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0009085 | lysine biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | No |
| GO:0044283 | small molecule biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g1914.t1 MITPFYTVALFGANGQIGRHVLKALNESKEAQMKVLAFVSPNSDFQVGDFDEANTIEKRVDLNIVTSNDLAEIMA SHDVSVVVSTLGCEVINKQGVIQDAAAMAGVRRFYPSEFGMHQIPWFEGEGAYLHPIWAAKMRCLDNAIKHPAIQ SGHMTYTVIGCAELFDVQDELILCPWLEKDQAITNDGYEVQCVGDPDAKMDYSSCEDVAKYLVASINHPERSENK ILGFRSDYISYNEITRLLRHYSRKPARINPTSVDQAKRILENPSSAPEKLQKGSTFPVDFWILLRYVQGQGRFWR PPGQLHNDLFPEVIPTSVERYFQSLFQGQD* |
| Coding | >Pro_DTO070G2_2|g1914.t1 ATGATTACCCCATTCTACACTGTTGCTTTGTTTGGAGCCAATGGCCAGATCGGAAGACACGTTTTGAAAGCACTG AATGAGTCGAAAGAGGCACAAATGAAAGTCCTTGCCTTCGTTTCTCCAAATTCTGATTTTCAAGTCGGCGACTTT GATGAGGCGAATACCATCGAAAAGAGAGTAGACCTCAACATCGTCACTAGCAATGACCTTGCAGAGATCATGGCC AGCCATGATGTCAGTGTTGTTGTTAGCACGCTTGGTTGTGAAGTTATCAACAAACAAGGTGTTATTCAAGACGCG GCTGCAATGGCAGGAGTTCGACGATTCTATCCGAGCGAATTCGGAATGCACCAGATACCTTGGTTTGAAGGCGAA GGGGCATATCTACATCCGATCTGGGCCGCAAAAATGAGATGCCTTGACAATGCAATCAAGCACCCCGCAATTCAG AGTGGCCATATGACCTACACCGTTATTGGGTGCGCTGAGCTCTTTGATGTACAGGACGAGTTAATTCTTTGTCCC TGGTTGGAAAAAGATCAGGCTATCACGAATGATGGCTATGAGGTTCAGTGCGTGGGAGACCCAGACGCAAAAATG GACTACTCCTCTTGTGAAGATGTCGCCAAATACCTCGTGGCCAGCATCAACCATCCAGAGAGATCCGAGAATAAG ATCTTGGGATTCCGAAGTGATTATATCTCTTACAACGAGATCACTCGACTTCTGCGTCATTACTCCAGAAAGCCA GCTCGAATCAACCCAACTTCCGTCGACCAGGCCAAAAGGATACTCGAAAATCCATCGTCCGCGCCGGAAAAGCTT CAGAAAGGAAGCACCTTCCCTGTTGATTTTTGGATTTTGTTACGATATGTGCAAGGTCAAGGTAGATTTTGGAGA CCTCCTGGTCAACTGCACAATGACCTCTTTCCCGAAGTCATACCAACTTCAGTTGAAAGATACTTCCAGAGTCTA TTCCAGGGGCAAGACTAG |
| Transcript | >Pro_DTO070G2_2|g1914.t1 ATGATTACCCCATTCTACACTGTTGCTTTGTTTGGAGCCAATGGCCAGATCGGAAGACACGTTTTGAAAGCACTG AATGAGTCGAAAGAGGCACAAATGAAAGTCCTTGCCTTCGTTTCTCCAAATTCTGATTTTCAAGTCGGCGACTTT GATGAGGCGAATACCATCGAAAAGAGAGTAGACCTCAACATCGTCACTAGCAATGACCTTGCAGAGATCATGGCC AGCCATGATGTCAGTGTTGTTGTTAGCACGCTTGGTTGTGAAGTTATCAACAAACAAGGTGTTATTCAAGACGCG GCTGCAATGGCAGGAGTTCGACGATTCTATCCGAGCGAATTCGGAATGCACCAGATACCTTGGTTTGAAGGCGAA GGGGCATATCTACATCCGATCTGGGCCGCAAAAATGAGATGCCTTGACAATGCAATCAAGCACCCCGCAATTCAG AGTGGCCATATGACCTACACCGTTATTGGGTGCGCTGAGCTCTTTGATGTACAGGACGAGTTAATTCTTTGTCCC TGGTTGGAAAAAGATCAGGCTATCACGAATGATGGCTATGAGGTTCAGTGCGTGGGAGACCCAGACGCAAAAATG GACTACTCCTCTTGTGAAGATGTCGCCAAATACCTCGTGGCCAGCATCAACCATCCAGAGAGATCCGAGAATAAG ATCTTGGGATTCCGAAGTGATTATATCTCTTACAACGAGATCACTCGACTTCTGCGTCATTACTCCAGAAAGCCA GCTCGAATCAACCCAACTTCCGTCGACCAGGCCAAAAGGATACTCGAAAATCCATCGTCCGCGCCGGAAAAGCTT CAGAAAGGAAGCACCTTCCCTGTTGATTTTTGGATTTTGTTACGATATGTGCAAGGTCAAGGTAGATTTTGGAGA CCTCCTGGTCAACTGCACAATGACCTCTTTCCCGAAGTCATACCAACTTCAGTTGAAAGATACTTCCAGAGTCTA TTCCAGGGGCAAGACTAG |
| Gene | >Pro_DTO070G2_2|g1914.t1 ATGATTACCCCATTCTACACTGTTGCTTTGTTTGGAGCCAATGGCCAGATCGGAAGACACGTTTTGAAAGCACTG AATGAGTCGAAAGAGGCACAAATGAAAGTCCTTGCCTTCGTTTCTCCAAATTCTGATTTTCAAGTCGGCGACTTT GATGAGGCGAATACCATCGAAAAGAGAGTAGACCTCAACATCGTCACTAGCAATGACCTTGCAGAGATCATGGCC AGCCATGATGTCAGTGTTGTTGTTAGCACGCTTGGTTGTGAAGTTATCAACAAACAAGGTGTTATTCAAGACGCG GCTGCAATGGCAGGAGTTCGACGATTCTATCCGAGCGAATTCGGAATGCACCAGATACCTTGGTTTGAAGGCGAA GGGGCATATCTACATCCGGTAAGTCTCTTAAGTTCCATCGTCTTCTGGCTTCATGCTCTAACATTTTGATTAGAT CTGGGCCGCAAAAATGAGATGCCTTGACAATGCAATCAAGCACCCCGCAATTCAGAGTGGCCATATGACCTACAC CGTTATTGGGTGCGCTGAGCTCTTTGATGTACAGGACGAGTTAATTCTTTGTCCCTGGTTGGAAAAAGATCAGGC TATCACGAATGATGGCTATGAGGTTCAGTGCGTGGGAGACCCAGACGCAAAAATGGACTACTCCTCTTGTGAAGA TGTCGCCAAATACCTCGTGGCCAGCATCAACCATCCAGAGAGATCCGAGAATAAGATCTTGGGATTCCGAAGTGA TTATATCTCTTACAACGAGATCACTCGACTTCTGCGTCATTACTCCAGAAAGCCAGCTCGAATCAACCCAACTTC CGTCGACCAGGCCAAAAGGATACTCGAAAATCCATCGTCCGCGCCGGAAAAGCTTCAGAAAGGAAGCACCTTCCC TGTTGATTTTTGGATTTTGTTACGATATGTGCAAGGTCAAGGTAGATTTTGGAGACCTCCTGGTCAACTGCACAA TGACCTCTTTCCCGAAGTCATACCAACTTCAGTTGAAAGATACTTCCAGAGTCTATTCCAGGGGCAAGACTAG |