© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g1850.t1 |
| Gene name | |
| Location | scaffold_02:216734..217666 |
| Strand | - |
| Gene length (bp) | 932 |
| Transcript length (bp) | 777 |
| Coding sequence length (bp) | 777 |
| Protein length (aa) | 259 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01522 | Polysacc_deac_1 | Polysaccharide deacetylase | 6.0E-28 | 53 | 175 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g1850.t1 MHFLAFPISLLLSAITLSQAAPTGNSINASTTTNTTQLNASRLPSGAIITRCTIPDTIALTFDDGPYIYTSQILD TLAQRGARATFFLNGHNRGNIDASPEIVQRALAEGHQLGSHTWNHASLDTLSYEEIVYQMTILEEAFTRILGFFP TYMRPPFLRHTPVVLGAMADLGYHVIGASVDTKDYENDNPDTNWVSFEKFKREVDAGGTIVLAHDSHQHTVEILV DNMLADVQRRGLRPVPVGECLGDPSEFWYRAGR* |
| Coding | >Pro_DTO070G2_2|g1850.t1 ATGCATTTCCTTGCATTTCCAATCTCATTGCTCCTTTCAGCTATTACCCTATCCCAAGCCGCTCCCACAGGGAAC AGTATCAACGCCAGCACAACCACCAATACCACCCAGCTCAACGCTTCCAGATTACCATCCGGAGCCATTATCACC CGCTGTACCATCCCGGACACAATCGCCCTCACTTTCGACGATGGCCCGTACATCTACACATCCCAGATACTAGAT ACCCTCGCCCAACGCGGCGCAAGGGCAACCTTCTTCCTCAACGGCCATAACAGGGGAAACATCGATGCATCACCC GAGATAGTGCAGCGTGCATTGGCAGAAGGACACCAGTTGGGATCTCATACATGGAACCACGCCTCCCTCGATACC CTCTCATACGAAGAAATCGTATACCAAATGACAATCCTCGAAGAAGCCTTCACACGCATCCTAGGCTTCTTCCCG ACCTACATGCGCCCCCCGTTCCTCAGACACACGCCCGTCGTTCTCGGCGCTATGGCCGATCTGGGATACCATGTC ATTGGGGCTAGTGTTGATACAAAGGACTATGAGAATGATAATCCTGATACGAATTGGGTTAGCTTTGAAAAGTTC AAGAGGGAGGTTGATGCTGGTGGCACCATTGTGTTGGCCCATGATTCGCATCAGCATACGGTTGAGATTTTGGTG GATAATATGCTTGCGGATGTTCAGAGAAGGGGGTTGAGACCTGTTCCTGTTGGCGAGTGTCTTGGTGATCCGTCT GAGTTTTGGTATCGTGCTGGGAGGTAG |
| Transcript | >Pro_DTO070G2_2|g1850.t1 ATGCATTTCCTTGCATTTCCAATCTCATTGCTCCTTTCAGCTATTACCCTATCCCAAGCCGCTCCCACAGGGAAC AGTATCAACGCCAGCACAACCACCAATACCACCCAGCTCAACGCTTCCAGATTACCATCCGGAGCCATTATCACC CGCTGTACCATCCCGGACACAATCGCCCTCACTTTCGACGATGGCCCGTACATCTACACATCCCAGATACTAGAT ACCCTCGCCCAACGCGGCGCAAGGGCAACCTTCTTCCTCAACGGCCATAACAGGGGAAACATCGATGCATCACCC GAGATAGTGCAGCGTGCATTGGCAGAAGGACACCAGTTGGGATCTCATACATGGAACCACGCCTCCCTCGATACC CTCTCATACGAAGAAATCGTATACCAAATGACAATCCTCGAAGAAGCCTTCACACGCATCCTAGGCTTCTTCCCG ACCTACATGCGCCCCCCGTTCCTCAGACACACGCCCGTCGTTCTCGGCGCTATGGCCGATCTGGGATACCATGTC ATTGGGGCTAGTGTTGATACAAAGGACTATGAGAATGATAATCCTGATACGAATTGGGTTAGCTTTGAAAAGTTC AAGAGGGAGGTTGATGCTGGTGGCACCATTGTGTTGGCCCATGATTCGCATCAGCATACGGTTGAGATTTTGGTG GATAATATGCTTGCGGATGTTCAGAGAAGGGGGTTGAGACCTGTTCCTGTTGGCGAGTGTCTTGGTGATCCGTCT GAGTTTTGGTATCGTGCTGGGAGGTAG |
| Gene | >Pro_DTO070G2_2|g1850.t1 ATGCATTTCCTTGCATTTCCAATCTCATTGCTCCTTTCAGCTATTACCCTATCCCAAGCCGCTCCCACAGGGAAC AGTATCAACGCCAGCACAACCACCAATACCACCCAGCTCAACGCTTCCAGATTACCATCCGGAGCCATTATCACC CGCTGTACCATCCCGGACACAATCGCCCTCACTTTCGACGATGGCCCGTACATCTACACATCCCAGATACTAGAT ACCCTCGCCCAACGCGGCGCAAGGGCAACCTTCTTCCTCAACGGCCATAACAGGGGAAACATCGATGCATCACCC GAGATAGTGCAGCGTGCATTGGCAGAAGGACACCAGTTGGGATCTCATACGTTCGTTTATACCACCCACTGGCTT ACTCTCTCTTCCCCAGCCCAGCCAGTCCAAGCCCCAACATACACTTACCAAATAACCGTCCAGATGGAACCACGC CTCCCTCGATACCCTCTCATACGAAGAAATCGTATACCAAATGACAATCCTCGAAGAAGCCTTCACACGCATCCT AGGCTTCTTCCCGACCTACATGCGCCCCCCGTTCCTCAGACACACGCCCGTCGTTCTCGGCGCTATGGCCGATCT GGGATACCATGTCATTGGGGCTAGTGTTGATACAAAGGACTATGAGAATGATAATCCTGATACGAATTGGGTTAG CTTTGAAAAGTTCAAGAGGGAGGTTGATGCTGGTGGCACCATTGTGTTGGCCCATGATTCGCATCAGCATACGGT TGAGATTTTGGTGGATAATATGCTTGCGGATGTTCAGAGAAGGGGGTTGAGACGTAAGTTTTCTTTTTCCTTTGT GTTTGTCGGTGGTTATGGGGTGAGGCTAACGGGTTTCTCTTATAGCTGTTCCTGTTGGCGAGTGTCTTGGTGATC CGTCTGAGTTTTGGTATCGTGCTGGGAGGTAG |