Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO070G2_2\|g1780.t1
Gene name
Location	scaffold_02:52432..53349
Strand	-
Gene length (bp)	917
Transcript length (bp)	780
Coding sequence length (bp)	780
Protein length (aa)	260

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09430	EMC7_beta-sandw	ER membrane protein complex subunit 7, beta-sandwich domain	1.1E-29	33	174

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO070G2_2\|g1780.t1 MHFSLSSLLLLGISSLVSASSLTITIPVSSSLPNPHVLPATSHATLTTLPSSGKDHILSASLTRSATFVFHDLPS SNPDAQPESYLLDICSAGGYVFAPYRVDVAADGSILGIWETFRGNPWDNRGAEKYVVGVTGKKQVDVVVEAKVLG RKVFYEQRAQFSPLSLVKNPMVLLAVVALGLMFVMPKLMDNMDPEMRAEFEQHSRSSPITGATTSAMAGGGFDLA SWMAGTGAPNPTASDVTQAGSTGRDTSGPARRRG*
Coding	>Pro_DTO070G2_2\|g1780.t1 ATGCATTTCTCGCTCTCCTCTCTTCTCCTGCTAGGGATTAGCAGTCTGGTGTCTGCCAGCTCTTTGACAATTACC ATTCCCGTCTCTAGTTCCCTCCCAAACCCGCATGTCCTCCCCGCAACCAGCCATGCCACTCTCACCACTCTCCCC TCTAGTGGGAAAGACCACATCCTGTCCGCATCGCTGACTCGCTCGGCGACGTTCGTGTTCCATGATCTTCCATCC TCCAATCCGGATGCTCAGCCCGAGTCCTACTTGCTCGATATCTGCTCCGCTGGTGGCTACGTCTTCGCCCCCTAC CGCGTCGATGTTGCGGCTGATGGATCCATTCTCGGAATCTGGGAGACTTTTCGCGGGAACCCGTGGGATAACCGT GGTGCGGAGAAATATGTAGTGGGTGTTACTGGAAAGAAGCAAGTTGACGTGGTTGTCGAGGCCAAGGTCCTTGGA CGGAAGGTCTTCTATGAGCAGCGTGCTCAATTCTCTCCCTTGAGTCTTGTCAAGAACCCAATGGTTTTGCTTGCA GTTGTCGCGCTGGGTCTCATGTTTGTCATGCCCAAGCTCATGGATAACATGGATCCTGAGATGCGCGCCGAATTT GAGCAGCACTCTCGCTCCTCGCCCATCACCGGTGCCACTACCAGTGCCATGGCTGGTGGCGGGTTTGATCTGGCC AGTTGGATGGCGGGCACTGGTGCACCTAACCCCACGGCCAGCGATGTGACTCAGGCTGGTTCAACTGGTAGAGAT ACGAGTGGTCCTGCCCGGAGGCGTGGATAG
Transcript	>Pro_DTO070G2_2\|g1780.t1 ATGCATTTCTCGCTCTCCTCTCTTCTCCTGCTAGGGATTAGCAGTCTGGTGTCTGCCAGCTCTTTGACAATTACC ATTCCCGTCTCTAGTTCCCTCCCAAACCCGCATGTCCTCCCCGCAACCAGCCATGCCACTCTCACCACTCTCCCC TCTAGTGGGAAAGACCACATCCTGTCCGCATCGCTGACTCGCTCGGCGACGTTCGTGTTCCATGATCTTCCATCC TCCAATCCGGATGCTCAGCCCGAGTCCTACTTGCTCGATATCTGCTCCGCTGGTGGCTACGTCTTCGCCCCCTAC CGCGTCGATGTTGCGGCTGATGGATCCATTCTCGGAATCTGGGAGACTTTTCGCGGGAACCCGTGGGATAACCGT GGTGCGGAGAAATATGTAGTGGGTGTTACTGGAAAGAAGCAAGTTGACGTGGTTGTCGAGGCCAAGGTCCTTGGA CGGAAGGTCTTCTATGAGCAGCGTGCTCAATTCTCTCCCTTGAGTCTTGTCAAGAACCCAATGGTTTTGCTTGCA GTTGTCGCGCTGGGTCTCATGTTTGTCATGCCCAAGCTCATGGATAACATGGATCCTGAGATGCGCGCCGAATTT GAGCAGCACTCTCGCTCCTCGCCCATCACCGGTGCCACTACCAGTGCCATGGCTGGTGGCGGGTTTGATCTGGCC AGTTGGATGGCGGGCACTGGTGCACCTAACCCCACGGCCAGCGATGTGACTCAGGCTGGTTCAACTGGTAGAGAT ACGAGTGGTCCTGCCCGGAGGCGTGGATAG
Gene	>Pro_DTO070G2_2\|g1780.t1 ATGCATTTCTCGCTCTCCTCTCTTCTCCTGCTAGGGATTAGCAGTCTGGTGTCTGCCAGCTCTTTGACAATTACC ATTCCCGTCTCTAGTTCCCTCCCAAACCCGCATGTCCTCCCCGCAACCAGCCATGCCACTCTCACCACTCTCCCC TCTAGTGGGAAAGACCACATCCTGTCCGCATCGCTGACTCGCTCGGCGACGTTCGTGTTCCATGATCTTCCATCC TCCAATCCGGATGCTCAGCCCGAGTCCTACTTGCTCGATATCTGCTCCGCTGGTGGCTACGTCTTCGCCCCCTAC CGCGTCGATGTTGCGGCTGATGGATCCATTCTCGGAATCTGGGAGACTTTTCGCGGGAACCCGTGGGATAACCGT GGTGCGGAGAAATATGTAGTGGGTGTTACTGGAAAGAAGCAAGTTGACGTGGTTGTCGAGGCCAAGGTCCTTGGA CGGAAGGTCTTCTATGAGCAGCGTGCTCAATGTGAGCTTGCCTCCTCTTCCCCGCAGATACAACCTGTAATATTT GTCCATAGCTGTGCTAACTTTGTATCGAATCGCAGTCTCTCCCTTGAGTCTTGTCAAGAACCCAATGGTTTTGCT TGCAGTTGTCGCGCTGGGTCTCATGTTTGTCATGCCCAAGCTCATGGATAACAGTATGTCTATTCCCCATTGACC CTAATCCAATGTTGGGTGCCTAACTTTGTTGTCCAGTGGATCCTGAGATGCGCGCCGAATTTGAGCAGCACTCTC GCTCCTCGCCCATCACCGGTGCCACTACCAGTGCCATGGCTGGTGGCGGGTTTGATCTGGCCAGTTGGATGGCGG GCACTGGTGCACCTAACCCCACGGCCAGCGATGTGACTCAGGCTGGTTCAACTGGTAGAGATACGAGTGGTCCTG CCCGGAGGCGTGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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