Protein ID | Pro_DTO070G2_2|g1700.t1 |
Gene name | |
Location | scaffold_01:4509169..4510847 |
Strand | + |
Gene length (bp) | 1678 |
Transcript length (bp) | 1437 |
Coding sequence length (bp) | 1437 |
Protein length (aa) | 479 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16862 | Glyco_hydro_79C | Glycosyl hydrolase family 79 C-terminal beta domain | 7.5E-22 | 372 | 475 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g1700.t1 MTSIPISALLLGLAASALSLSFNVPISPPSNSSQQLSAAPVGVSLEFFAFPEYIQEVESTMTCLQNLKDLTGTWP PMRIGGTTQDRAIYNSSSTEAVTYTVASTGAAPETLTYGPSFISLAAGYAGEVIIGLNRRLGDILNTISAALLAQ SKMNNLYSIELGNEPNFFVDSDPIANGASWTAAADESSQVTWQDAMCGNLSATDIISAGVYFGTSPMSLASLTAK ESDANDYVKDYCSHNYPQSSGSYDLATLMGHSSIATQIKPYATEVSAAAEKGKPHIFGETNSATQGGGGISPTFG AALWILDYVMQTVLMGTNALYFHQGTVGNCQYCWWGRYDIGSPYYGAYFASMALANADQIAPLDSQDTAYAAYAL YKASVPVRVLLYNSDYYISTSGTRSSQIYTLSGLFSSGVTAKRLTAPYATSRVDQGQNPTVAGQTFANGTCIIQG IESIETVTVSGGKATFTVAASEALLVYL* |
Coding | >Pro_DTO070G2_2|g1700.t1 ATGACATCAATTCCCATCTCAGCCTTGCTTCTAGGCCTCGCGGCTTCGGCTTTGAGTTTGAGCTTCAATGTTCCG ATATCCCCGCCTTCAAATTCTAGCCAGCAGCTCTCTGCAGCTCCAGTTGGTGTATCTCTGGAGTTCTTTGCGTTC CCTGAGTACATTCAAGAGGTCGAATCAACAATGACATGTCTGCAGAACCTCAAGGATCTGACAGGAACATGGCCT CCTATGCGGATCGGAGGCACAACACAGGACCGCGCGATATACAATAGCTCATCAACGGAAGCTGTCACTTATACA GTGGCCAGCACAGGTGCTGCGCCCGAGACTCTGACTTACGGACCGTCCTTCATCTCTTTGGCTGCAGGCTATGCC GGAGAAGTTATAATTGGATTGAATCGTCGTTTGGGCGATATCTTGAACACAATTTCGGCCGCGCTTCTCGCCCAG AGCAAAATGAACAATCTATACTCCATTGAACTGGGGAATGAGCCCAACTTTTTCGTTGACAGCGATCCTATTGCC AATGGTGCATCCTGGACAGCTGCAGCTGATGAATCATCCCAAGTCACCTGGCAAGATGCGATGTGCGGAAATCTC TCTGCAACTGATATCATCTCAGCAGGTGTCTACTTTGGCACTTCGCCCATGAGCCTCGCTAGCCTTACCGCGAAA GAGAGTGATGCGAATGACTATGTGAAGGATTATTGCTCTCACAACTATCCCCAGTCATCTGGCTCCTACGACCTT GCTACTCTTATGGGCCACAGCAGTATTGCCACCCAGATCAAGCCTTATGCTACTGAAGTTTCTGCAGCTGCTGAA AAAGGCAAACCGCATATCTTCGGCGAGACTAACTCGGCAACCCAAGGCGGTGGTGGTATCAGCCCGACTTTTGGT GCTGCGCTCTGGATCTTGGACTACGTGATGCAGACCGTCCTCATGGGCACAAATGCCCTCTACTTCCACCAGGGT ACCGTTGGAAACTGCCAATACTGCTGGTGGGGCCGCTACGACATAGGATCCCCTTACTACGGTGCTTACTTCGCC AGCATGGCGCTCGCCAACGCCGACCAGATTGCGCCTCTGGATAGCCAAGATACAGCATATGCAGCCTACGCCCTC TACAAGGCTAGCGTTCCTGTCCGGGTCCTTCTCTACAATTCCGACTACTATATATCTACCAGCGGAACACGGTCC TCGCAAATATATACACTGTCTGGGCTTTTTTCCTCAGGCGTTACTGCTAAACGGCTGACTGCTCCCTATGCTACG TCTCGGGTCGATCAAGGTCAGAACCCGACCGTTGCGGGCCAGACATTTGCCAACGGCACTTGCATTATTCAGGGT ATAGAGAGCATAGAGACAGTCACTGTCTCTGGCGGGAAAGCAACCTTCACTGTTGCAGCTTCGGAAGCTCTTCTG GTTTACCTGTAA |
Transcript | >Pro_DTO070G2_2|g1700.t1 ATGACATCAATTCCCATCTCAGCCTTGCTTCTAGGCCTCGCGGCTTCGGCTTTGAGTTTGAGCTTCAATGTTCCG ATATCCCCGCCTTCAAATTCTAGCCAGCAGCTCTCTGCAGCTCCAGTTGGTGTATCTCTGGAGTTCTTTGCGTTC CCTGAGTACATTCAAGAGGTCGAATCAACAATGACATGTCTGCAGAACCTCAAGGATCTGACAGGAACATGGCCT CCTATGCGGATCGGAGGCACAACACAGGACCGCGCGATATACAATAGCTCATCAACGGAAGCTGTCACTTATACA GTGGCCAGCACAGGTGCTGCGCCCGAGACTCTGACTTACGGACCGTCCTTCATCTCTTTGGCTGCAGGCTATGCC GGAGAAGTTATAATTGGATTGAATCGTCGTTTGGGCGATATCTTGAACACAATTTCGGCCGCGCTTCTCGCCCAG AGCAAAATGAACAATCTATACTCCATTGAACTGGGGAATGAGCCCAACTTTTTCGTTGACAGCGATCCTATTGCC AATGGTGCATCCTGGACAGCTGCAGCTGATGAATCATCCCAAGTCACCTGGCAAGATGCGATGTGCGGAAATCTC TCTGCAACTGATATCATCTCAGCAGGTGTCTACTTTGGCACTTCGCCCATGAGCCTCGCTAGCCTTACCGCGAAA GAGAGTGATGCGAATGACTATGTGAAGGATTATTGCTCTCACAACTATCCCCAGTCATCTGGCTCCTACGACCTT GCTACTCTTATGGGCCACAGCAGTATTGCCACCCAGATCAAGCCTTATGCTACTGAAGTTTCTGCAGCTGCTGAA AAAGGCAAACCGCATATCTTCGGCGAGACTAACTCGGCAACCCAAGGCGGTGGTGGTATCAGCCCGACTTTTGGT GCTGCGCTCTGGATCTTGGACTACGTGATGCAGACCGTCCTCATGGGCACAAATGCCCTCTACTTCCACCAGGGT ACCGTTGGAAACTGCCAATACTGCTGGTGGGGCCGCTACGACATAGGATCCCCTTACTACGGTGCTTACTTCGCC AGCATGGCGCTCGCCAACGCCGACCAGATTGCGCCTCTGGATAGCCAAGATACAGCATATGCAGCCTACGCCCTC TACAAGGCTAGCGTTCCTGTCCGGGTCCTTCTCTACAATTCCGACTACTATATATCTACCAGCGGAACACGGTCC TCGCAAATATATACACTGTCTGGGCTTTTTTCCTCAGGCGTTACTGCTAAACGGCTGACTGCTCCCTATGCTACG TCTCGGGTCGATCAAGGTCAGAACCCGACCGTTGCGGGCCAGACATTTGCCAACGGCACTTGCATTATTCAGGGT ATAGAGAGCATAGAGACAGTCACTGTCTCTGGCGGGAAAGCAACCTTCACTGTTGCAGCTTCGGAAGCTCTTCTG GTTTACCTGTAA |
Gene | >Pro_DTO070G2_2|g1700.t1 ATGACATCAATTCCCATCTCAGCCTTGCTTCTAGGCCTCGCGGCTTCGGCTTTGAGTTTGAGCTTCAATGTTCCG ATATCCCCGCCTTCAAATTCTAGCCAGCAGCTCTCTGCAGCTCCAGTTGGTGTATCGTGAGTCTTTATCTAAGCC ATTGGCAGATTTAATTACTCACCGTGAAGTCTGGAGTTCTTTGCGTTCCCTGAGTACATTCAAGAGGTCGAATCA ACAATGACATGTCTGCAGAACCTCAAGGATCTGACAGGAACATGGCCTCCTATGCGGATCGGAGGCACAACACAG TATGTATGCTTTTATTGGTCAATAAATGTTGTTAACAGTACGCAGGGACCGCGCGATATACAATAGCTCATCAAC GGAAGCTGTCACTTATACAGTGGCCAGCACAGGTGCTGCGCCCGAGACTCTGACTTACGGACCGTCCTTCATCTC TTTGGCTGCAGGCTATGCCGGAGAAGTTATAATTGGATTGAATCGTCGTTTGGGCGATATCTTGAACACAATTTC GGCCGCGCTTCTCGCCCAGAGCAAAATGAACAATCTATACTCCATTGAACTGGGGAATGAGCCCAACTGTAGGTC TCAAATTACTTATTCTTGGTTGTGTAGACGCTAATTAAGCGTTCAGTTTTCGTTGACAGCGATCCTATTGCCAAT GGTGCATCCTGGACAGCTGCAGCTGATGAATCATCCCAAGTCACCTGGCAAGATGCGATGTGCGGAAATCTCTCT GCAACTGATATCATCTCAGCAGGTGTCTACTTTGGCACTTCGCCCATGAGCCTCGCTAGCCTTACCGCGAAAGAG AGTGATGCGAATGACTATGTGAAGGATTATTGCTCTCACAACTATCCCCAGTCATCTGGCTCCTACGACCTTGCT ACTCTTATGGGCCACAGCAGTATTGCCACCCAGATCAAGCCTTATGCTACTGAAGTTTCTGCAGCTGCTGAAAAA GGCAAACCGCATATCTTCGGCGAGACTAACTCGGGTACGTTACTGCTCACTGTCACTTGATAAAAATACTAAAAA TATTCAGCAACCCAAGGCGGTGGTGGTATCAGCCCGACTTTTGGTGCTGCGCTCTGGATCTTGGACTACGTGATG CAGACCGTCCTCATGGGCACAAATGCCCTCTACTTCCACCAGGGTACCGTTGGAAACTGTAAGTTATCTAGAACT TCTTACCCACCCACAAGCTAACTTTCAAGGCCAATACTGCTGGTGGGGCCGCTACGACATAGGATCCCCTTACTA CGGTGCTTACTTCGCCAGCATGGCGCTCGCCAACGCCGACCAGATTGCGCCTCTGGATAGCCAAGATACAGCATA TGCAGCCTACGCCCTCTACAAGGCTAGCGTTCCTGTCCGGGTCCTTCTCTACAATTCCGACTACTATATATCTAC CAGCGGAACACGGTCCTCGCAAATATATACACTGTCTGGGCTTTTTTCCTCAGGCGTTACTGCTAAACGGCTGAC TGCTCCCTATGCTACGTCTCGGGTCGATCAAGGTCAGAACCCGACCGTTGCGGGCCAGACATTTGCCAACGGCAC TTGCATTATTCAGGGTATAGAGAGCATAGAGACAGTCACTGTCTCTGGCGGGAAAGCAACCTTCACTGTTGCAGC TTCGGAAGCTCTTCTGGTTTACCTGTAA |