© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g1606.t1 |
| Gene name | |
| Location | scaffold_01:4242063..4243852 |
| Strand | - |
| Gene length (bp) | 1789 |
| Transcript length (bp) | 1704 |
| Coding sequence length (bp) | 1704 |
| Protein length (aa) | 568 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00282 | Pyridoxal_deC | Pyridoxal-dependent decarboxylase conserved domain | 1.6E-77 | 65 | 451 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030170 | pyridoxal phosphate binding | Yes |
| GO:0016830 | carbon-carbon lyase activity | Yes |
| GO:0019752 | carboxylic acid metabolic process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0070279 | vitamin B6 binding | No |
| GO:0016829 | lyase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0043168 | anion binding | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0019842 | vitamin binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0005488 | binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g1606.t1 MSGIAQPNRADEVQSLLKAVEDLLIPFIRSADEDPRGSLTQKNGTNGTNGHTGLVGTSLIDYKKPEELQDILQLE IPEKGTKQEGLIEVLKKVLQYSVNTWHQGFLDKLYASTNAPGVAAELILATLNTNVHVYQVSPALTVIEKYTGQR LANLFGLNGPQAGGISVQGGSASNTTSIVIARNNLYPSTKTDGNGGYKFVLFTSAHGHYSVEKAAQMLGFGSSAV WPVPVDKVGRMIPAELEKLVQKAQSEGRTPFYVNATAGTTVLGSFDPFNEIAAICEKYNLWFHIDGSWGGSFVFS QRQKHKLAGAEKANSIGINPHKMLGVPVTCSYLLASDIRQFHKANTLPAGYLFHSEEDEPATNGDANKESELEVD SPEVWDLADLTLQCGRRADSLKLFLGWTYYGNEGYRQQIDSACDIAAHLANTIAQHPDFVLISENPPPCLQVCFY YAPGKKFVYPRGIVSNETQRGKNNSKVTEQVTRAIVPKGFMVDFAPPSGEEDEDAAGNGKFFRCVVNVQTTKETV DSLIRAIEEVGPGIIESLKASNPALPHKRPGERGHGPVVHRA* |
| Coding | >Pro_DTO070G2_2|g1606.t1 ATGTCTGGCATTGCGCAGCCCAATCGCGCTGATGAAGTGCAAAGTCTTCTGAAAGCGGTGGAAGACCTTCTCATC CCCTTTATCCGATCCGCAGACGAGGATCCCCGCGGGTCCTTGACACAGAAAAATGGCACCAACGGCACCAATGGA CACACTGGACTCGTTGGAACCTCATTGATAGATTATAAGAAGCCTGAAGAGCTGCAGGATATCCTTCAGCTTGAG ATCCCAGAGAAAGGCACCAAGCAGGAAGGTCTCATTGAAGTCTTGAAAAAGGTTCTGCAATACTCGGTCAACACC TGGCACCAGGGATTTTTGGACAAGCTGTATGCGTCAACCAATGCGCCCGGCGTGGCAGCAGAGCTCATACTTGCT ACCTTGAACACCAACGTACACGTCTACCAAGTGTCCCCTGCGCTGACGGTCATTGAGAAATATACCGGCCAGCGG TTGGCGAACCTCTTCGGGCTGAACGGTCCACAGGCGGGAGGCATTTCCGTGCAGGGCGGATCCGCATCGAACACC ACCTCCATTGTCATTGCGCGAAACAACCTATACCCCAGCACGAAGACAGACGGGAACGGCGGGTACAAGTTCGTG CTCTTCACGAGCGCACACGGCCACTACAGCGTGGAAAAGGCAGCGCAGATGCTCGGGTTCGGCAGCAGTGCTGTC TGGCCTGTTCCTGTTGACAAGGTCGGCCGCATGATCCCAGCCGAGCTTGAGAAACTGGTTCAGAAGGCGCAGAGC GAAGGCCGGACGCCGTTCTATGTCAATGCCACCGCAGGCACAACCGTCCTAGGCTCTTTCGACCCCTTCAACGAA ATCGCAGCCATTTGCGAAAAATACAACCTGTGGTTCCACATTGACGGATCCTGGGGTGGCTCGTTCGTTTTCTCC CAGCGCCAGAAGCATAAGCTAGCTGGCGCAGAGAAAGCAAACAGCATCGGCATTAATCCGCACAAAATGCTTGGC GTTCCGGTCACCTGCTCTTACCTGCTAGCCTCGGATATACGCCAGTTCCACAAGGCCAACACACTTCCCGCGGGG TACCTATTCCACAGCGAAGAAGACGAGCCCGCTACCAACGGCGACGCAAACAAAGAATCCGAGTTGGAAGTCGAC TCACCGGAAGTGTGGGATCTAGCAGACCTCACTCTCCAATGTGGTCGACGTGCGGATTCGTTGAAGCTGTTTTTG GGTTGGACATACTATGGCAATGAGGGCTACCGACAGCAGATCGACTCGGCATGCGACATCGCTGCGCACTTGGCT AATACCATCGCGCAACATCCTGATTTCGTTCTTATTAGCGAAAACCCTCCGCCCTGTCTGCAGGTGTGCTTTTAC TACGCGCCAGGCAAGAAGTTCGTGTACCCGCGTGGCATCGTCTCGAATGAGACACAGCGCGGGAAGAATAACAGC AAGGTCACTGAGCAGGTGACGCGTGCAATCGTGCCCAAGGGCTTCATGGTGGACTTTGCGCCTCCCAGTGGAGAG GAGGACGAGGATGCAGCTGGGAATGGGAAGTTCTTCCGGTGCGTGGTGAATGTCCAGACGACGAAGGAGACCGTT GATTCGCTTATCCGCGCCATCGAAGAGGTGGGTCCTGGTATTATTGAGTCTTTGAAGGCGAGCAACCCGGCGCTT CCGCACAAGCGGCCTGGTGAGCGTGGACACGGACCTGTTGTCCATCGCGCTTGA |
| Transcript | >Pro_DTO070G2_2|g1606.t1 ATGTCTGGCATTGCGCAGCCCAATCGCGCTGATGAAGTGCAAAGTCTTCTGAAAGCGGTGGAAGACCTTCTCATC CCCTTTATCCGATCCGCAGACGAGGATCCCCGCGGGTCCTTGACACAGAAAAATGGCACCAACGGCACCAATGGA CACACTGGACTCGTTGGAACCTCATTGATAGATTATAAGAAGCCTGAAGAGCTGCAGGATATCCTTCAGCTTGAG ATCCCAGAGAAAGGCACCAAGCAGGAAGGTCTCATTGAAGTCTTGAAAAAGGTTCTGCAATACTCGGTCAACACC TGGCACCAGGGATTTTTGGACAAGCTGTATGCGTCAACCAATGCGCCCGGCGTGGCAGCAGAGCTCATACTTGCT ACCTTGAACACCAACGTACACGTCTACCAAGTGTCCCCTGCGCTGACGGTCATTGAGAAATATACCGGCCAGCGG TTGGCGAACCTCTTCGGGCTGAACGGTCCACAGGCGGGAGGCATTTCCGTGCAGGGCGGATCCGCATCGAACACC ACCTCCATTGTCATTGCGCGAAACAACCTATACCCCAGCACGAAGACAGACGGGAACGGCGGGTACAAGTTCGTG CTCTTCACGAGCGCACACGGCCACTACAGCGTGGAAAAGGCAGCGCAGATGCTCGGGTTCGGCAGCAGTGCTGTC TGGCCTGTTCCTGTTGACAAGGTCGGCCGCATGATCCCAGCCGAGCTTGAGAAACTGGTTCAGAAGGCGCAGAGC GAAGGCCGGACGCCGTTCTATGTCAATGCCACCGCAGGCACAACCGTCCTAGGCTCTTTCGACCCCTTCAACGAA ATCGCAGCCATTTGCGAAAAATACAACCTGTGGTTCCACATTGACGGATCCTGGGGTGGCTCGTTCGTTTTCTCC CAGCGCCAGAAGCATAAGCTAGCTGGCGCAGAGAAAGCAAACAGCATCGGCATTAATCCGCACAAAATGCTTGGC GTTCCGGTCACCTGCTCTTACCTGCTAGCCTCGGATATACGCCAGTTCCACAAGGCCAACACACTTCCCGCGGGG TACCTATTCCACAGCGAAGAAGACGAGCCCGCTACCAACGGCGACGCAAACAAAGAATCCGAGTTGGAAGTCGAC TCACCGGAAGTGTGGGATCTAGCAGACCTCACTCTCCAATGTGGTCGACGTGCGGATTCGTTGAAGCTGTTTTTG GGTTGGACATACTATGGCAATGAGGGCTACCGACAGCAGATCGACTCGGCATGCGACATCGCTGCGCACTTGGCT AATACCATCGCGCAACATCCTGATTTCGTTCTTATTAGCGAAAACCCTCCGCCCTGTCTGCAGGTGTGCTTTTAC TACGCGCCAGGCAAGAAGTTCGTGTACCCGCGTGGCATCGTCTCGAATGAGACACAGCGCGGGAAGAATAACAGC AAGGTCACTGAGCAGGTGACGCGTGCAATCGTGCCCAAGGGCTTCATGGTGGACTTTGCGCCTCCCAGTGGAGAG GAGGACGAGGATGCAGCTGGGAATGGGAAGTTCTTCCGGTGCGTGGTGAATGTCCAGACGACGAAGGAGACCGTT GATTCGCTTATCCGCGCCATCGAAGAGGTGGGTCCTGGTATTATTGAGTCTTTGAAGGCGAGCAACCCGGCGCTT CCGCACAAGCGGCCTGGTGAGCGTGGACACGGACCTGTTGTCCATCGCGCTTGA |
| Gene | >Pro_DTO070G2_2|g1606.t1 ATGTCTGGCATTGCGCAGCCCAATCGCGCTGATGAAGTGCAAAGTGTGAGTCAACTCTATATCGCAATGATCTAC ACCCCACCAGATTCTTTATTCGATGTTCTGAAACTAATGCGAGCACCATGCTCAGCTTCTGAAAGCGGTGGAAGA CCTTCTCATCCCCTTTATCCGATCCGCAGACGAGGATCCCCGCGGGTCCTTGACACAGAAAAATGGCACCAACGG CACCAATGGACACACTGGACTCGTTGGAACCTCATTGATAGATTATAAGAAGCCTGAAGAGCTGCAGGATATCCT TCAGCTTGAGATCCCAGAGAAAGGCACCAAGCAGGAAGGTCTCATTGAAGTCTTGAAAAAGGTTCTGCAATACTC GGTCAACACCTGGCACCAGGGATTTTTGGACAAGCTGTATGCGTCAACCAATGCGCCCGGCGTGGCAGCAGAGCT CATACTTGCTACCTTGAACACCAACGTACACGTCTACCAAGTGTCCCCTGCGCTGACGGTCATTGAGAAATATAC CGGCCAGCGGTTGGCGAACCTCTTCGGGCTGAACGGTCCACAGGCGGGAGGCATTTCCGTGCAGGGCGGATCCGC ATCGAACACCACCTCCATTGTCATTGCGCGAAACAACCTATACCCCAGCACGAAGACAGACGGGAACGGCGGGTA CAAGTTCGTGCTCTTCACGAGCGCACACGGCCACTACAGCGTGGAAAAGGCAGCGCAGATGCTCGGGTTCGGCAG CAGTGCTGTCTGGCCTGTTCCTGTTGACAAGGTCGGCCGCATGATCCCAGCCGAGCTTGAGAAACTGGTTCAGAA GGCGCAGAGCGAAGGCCGGACGCCGTTCTATGTCAATGCCACCGCAGGCACAACCGTCCTAGGCTCTTTCGACCC CTTCAACGAAATCGCAGCCATTTGCGAAAAATACAACCTGTGGTTCCACATTGACGGATCCTGGGGTGGCTCGTT CGTTTTCTCCCAGCGCCAGAAGCATAAGCTAGCTGGCGCAGAGAAAGCAAACAGCATCGGCATTAATCCGCACAA AATGCTTGGCGTTCCGGTCACCTGCTCTTACCTGCTAGCCTCGGATATACGCCAGTTCCACAAGGCCAACACACT TCCCGCGGGGTACCTATTCCACAGCGAAGAAGACGAGCCCGCTACCAACGGCGACGCAAACAAAGAATCCGAGTT GGAAGTCGACTCACCGGAAGTGTGGGATCTAGCAGACCTCACTCTCCAATGTGGTCGACGTGCGGATTCGTTGAA GCTGTTTTTGGGTTGGACATACTATGGCAATGAGGGCTACCGACAGCAGATCGACTCGGCATGCGACATCGCTGC GCACTTGGCTAATACCATCGCGCAACATCCTGATTTCGTTCTTATTAGCGAAAACCCTCCGCCCTGTCTGCAGGT GTGCTTTTACTACGCGCCAGGCAAGAAGTTCGTGTACCCGCGTGGCATCGTCTCGAATGAGACACAGCGCGGGAA GAATAACAGCAAGGTCACTGAGCAGGTGACGCGTGCAATCGTGCCCAAGGGCTTCATGGTGGACTTTGCGCCTCC CAGTGGAGAGGAGGACGAGGATGCAGCTGGGAATGGGAAGTTCTTCCGGTGCGTGGTGAATGTCCAGACGACGAA GGAGACCGTTGATTCGCTTATCCGCGCCATCGAAGAGGTGGGTCCTGGTATTATTGAGTCTTTGAAGGCGAGCAA CCCGGCGCTTCCGCACAAGCGGCCTGGTGAGCGTGGACACGGACCTGTTGTCCATCGCGCTTGA |