Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO070G2_2\|g1450.t1
Gene name
Location	scaffold_01:3836553..3837270
Strand	-
Gene length (bp)	717
Transcript length (bp)	717
Coding sequence length (bp)	717
Protein length (aa)	239

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF20493	WD-like_fungi	Fungal WD-like	5.8E-08	123	237

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 23	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO070G2_2\|g1450.t1 MLSSTIITSLILGLSQLSTGIALPSTPPPTPEPGFIINHVASDYFPNSKGDLSAFDVDVHYVGYSSATEAWLTSL DPHSATSDEEKARILTEAAYAKKYDENDADMAGDVESLLAHVAGNVTTTTAGIAKRSTFSTSAAHAVLWSACGTV FSCIAGTTCQFDLQINRAPRSRCEAQGGSNCCVSWSTYNVRAGFFSSTWTACNQEVQAEHKINASCEGFGTSDQG GDVCLSNRATGCT*
Coding	>Pro_DTO070G2_2\|g1450.t1 ATGCTCTCCAGCACCATCATCACCAGCCTTATCCTGGGTCTTTCCCAGCTAAGCACTGGCATTGCACTGCCCTCA ACCCCACCCCCAACCCCAGAACCCGGCTTCATCATCAACCACGTAGCCTCCGACTACTTCCCAAACTCGAAGGGC GACCTGAGCGCCTTCGACGTGGACGTCCACTACGTGGGATATTCCAGCGCGACCGAAGCCTGGCTCACCAGCCTG GACCCGCACTCAGCCACCAGCGACGAAGAGAAAGCGCGCATCCTGACCGAAGCCGCGTACGCGAAGAAATACGAC GAGAACGACGCCGACATGGCCGGCGACGTGGAGTCGTTGCTCGCGCACGTTGCCGGGAACGTCACCACTACTACC GCGGGCATTGCGAAGCGGTCGACCTTCTCGACTAGCGCGGCGCATGCTGTCCTGTGGAGTGCGTGCGGTACGGTG TTCTCTTGTATTGCTGGTACGACTTGTCAGTTTGATCTGCAGATTAACAGGGCCCCGCGTAGCCGTTGCGAGGCG CAGGGTGGCTCGAACTGCTGTGTTAGTTGGTCGACTTATAATGTGCGGGCTGGGTTCTTCTCGAGTACTTGGACG GCTTGCAATCAGGAGGTTCAGGCCGAGCATAAGATTAATGCTTCTTGTGAGGGATTCGGGACTTCGGACCAGGGT GGTGATGTTTGTCTAAGCAATCGTGCTACTGGATGTACCTAG
Transcript	>Pro_DTO070G2_2\|g1450.t1 ATGCTCTCCAGCACCATCATCACCAGCCTTATCCTGGGTCTTTCCCAGCTAAGCACTGGCATTGCACTGCCCTCA ACCCCACCCCCAACCCCAGAACCCGGCTTCATCATCAACCACGTAGCCTCCGACTACTTCCCAAACTCGAAGGGC GACCTGAGCGCCTTCGACGTGGACGTCCACTACGTGGGATATTCCAGCGCGACCGAAGCCTGGCTCACCAGCCTG GACCCGCACTCAGCCACCAGCGACGAAGAGAAAGCGCGCATCCTGACCGAAGCCGCGTACGCGAAGAAATACGAC GAGAACGACGCCGACATGGCCGGCGACGTGGAGTCGTTGCTCGCGCACGTTGCCGGGAACGTCACCACTACTACC GCGGGCATTGCGAAGCGGTCGACCTTCTCGACTAGCGCGGCGCATGCTGTCCTGTGGAGTGCGTGCGGTACGGTG TTCTCTTGTATTGCTGGTACGACTTGTCAGTTTGATCTGCAGATTAACAGGGCCCCGCGTAGCCGTTGCGAGGCG CAGGGTGGCTCGAACTGCTGTGTTAGTTGGTCGACTTATAATGTGCGGGCTGGGTTCTTCTCGAGTACTTGGACG GCTTGCAATCAGGAGGTTCAGGCCGAGCATAAGATTAATGCTTCTTGTGAGGGATTCGGGACTTCGGACCAGGGT GGTGATGTTTGTCTAAGCAATCGTGCTACTGGATGTACCTAG
Gene	>Pro_DTO070G2_2\|g1450.t1 ATGCTCTCCAGCACCATCATCACCAGCCTTATCCTGGGTCTTTCCCAGCTAAGCACTGGCATTGCACTGCCCTCA ACCCCACCCCCAACCCCAGAACCCGGCTTCATCATCAACCACGTAGCCTCCGACTACTTCCCAAACTCGAAGGGC GACCTGAGCGCCTTCGACGTGGACGTCCACTACGTGGGATATTCCAGCGCGACCGAAGCCTGGCTCACCAGCCTG GACCCGCACTCAGCCACCAGCGACGAAGAGAAAGCGCGCATCCTGACCGAAGCCGCGTACGCGAAGAAATACGAC GAGAACGACGCCGACATGGCCGGCGACGTGGAGTCGTTGCTCGCGCACGTTGCCGGGAACGTCACCACTACTACC GCGGGCATTGCGAAGCGGTCGACCTTCTCGACTAGCGCGGCGCATGCTGTCCTGTGGAGTGCGTGCGGTACGGTG TTCTCTTGTATTGCTGGTACGACTTGTCAGTTTGATCTGCAGATTAACAGGGCCCCGCGTAGCCGTTGCGAGGCG CAGGGTGGCTCGAACTGCTGTGTTAGTTGGTCGACTTATAATGTGCGGGCTGGGTTCTTCTCGAGTACTTGGACG GCTTGCAATCAGGAGGTTCAGGCCGAGCATAAGATTAATGCTTCTTGTGAGGGATTCGGGACTTCGGACCAGGGT GGTGATGTTTGTCTAAGCAATCGTGCTACTGGATGTACCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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