Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g1281.t1
Gene name
Locationscaffold_01:3413518..3413883
Strand-
Gene length (bp)365
Transcript length (bp)243
Coding sequence length (bp)243
Protein length (aa) 81

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11160 Hva1_TUDOR Hypervirulence associated proteins TUDOR domain 4.6E-10 17 70

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g1281.t1
MSVEEIQDKNGKDITEGDFVYTKYRGGSHEGKVEMIIRDQASAQQEGVASYPKVIYTDQHGHRVAHNPITLTKQN
RSAAE*
Coding >Pro_DTO070G2_2|g1281.t1
ATGTCAGTTGAGGAGATACAGGACAAGAACGGCAAGGATATCACTGAAGGTGACTTTGTCTACACCAAGTACAGA
GGCGGGTCACATGAGGGCAAGGTCGAAATGATCATCAGAGATCAAGCTAGTGCCCAACAAGAAGGTGTGGCCAGC
TACCCTAAGGTCATCTACACCGATCAACATGGTCATCGAGTCGCTCATAATCCGATCACTCTAACAAAGCAAAAC
AGAAGTGCAGCTGAATGA
Transcript >Pro_DTO070G2_2|g1281.t1
ATGTCAGTTGAGGAGATACAGGACAAGAACGGCAAGGATATCACTGAAGGTGACTTTGTCTACACCAAGTACAGA
GGCGGGTCACATGAGGGCAAGGTCGAAATGATCATCAGAGATCAAGCTAGTGCCCAACAAGAAGGTGTGGCCAGC
TACCCTAAGGTCATCTACACCGATCAACATGGTCATCGAGTCGCTCATAATCCGATCACTCTAACAAAGCAAAAC
AGAAGTGCAGCTGAATGA
Gene >Pro_DTO070G2_2|g1281.t1
ATGTCAGTTGAGGAGATACAGGACAAGAACGGCAAGGATATCACTGAAGGTGACTTTGTCTACACCAAGTACAGA
GGCGGGTCACATGAGGGCAAGGTAGGATTCCCATAACAAATCTTTCGTTTGTGCTCAAGTCCTACGGCACAAATG
ACCCGTAAGTAGGTCGAAATGATCATCAGAGATCAAGCTAGTGCCCAACAAGAAGGTGTGGCCAGCTACCCTAAG
GCAAGTCCTCAGCGAGACCAGTTCCCCACGTCGTGGCTAATCCGTGCACGTTATAGGTCATCTACACCGATCAAC
ATGGTCATCGAGTCGCTCATAATCCGATCACTCTAACAAAGCAAAACAGAAGTGCAGCTGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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