Protein ID | Pro_DTO070G2_2|g1281.t1 |
Gene name | |
Location | scaffold_01:3413518..3413883 |
Strand | - |
Gene length (bp) | 365 |
Transcript length (bp) | 243 |
Coding sequence length (bp) | 243 |
Protein length (aa) | 81 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11160 | Hva1_TUDOR | Hypervirulence associated proteins TUDOR domain | 4.6E-10 | 17 | 70 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 3 | (None) |
Orthofinder run ID | 2 |
Orthogroup | 652 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO070G2_2|g1281.t1 MSVEEIQDKNGKDITEGDFVYTKYRGGSHEGKVEMIIRDQASAQQEGVASYPKVIYTDQHGHRVAHNPITLTKQN RSAAE* |
Coding | >Pro_DTO070G2_2|g1281.t1 ATGTCAGTTGAGGAGATACAGGACAAGAACGGCAAGGATATCACTGAAGGTGACTTTGTCTACACCAAGTACAGA GGCGGGTCACATGAGGGCAAGGTCGAAATGATCATCAGAGATCAAGCTAGTGCCCAACAAGAAGGTGTGGCCAGC TACCCTAAGGTCATCTACACCGATCAACATGGTCATCGAGTCGCTCATAATCCGATCACTCTAACAAAGCAAAAC AGAAGTGCAGCTGAATGA |
Transcript | >Pro_DTO070G2_2|g1281.t1 ATGTCAGTTGAGGAGATACAGGACAAGAACGGCAAGGATATCACTGAAGGTGACTTTGTCTACACCAAGTACAGA GGCGGGTCACATGAGGGCAAGGTCGAAATGATCATCAGAGATCAAGCTAGTGCCCAACAAGAAGGTGTGGCCAGC TACCCTAAGGTCATCTACACCGATCAACATGGTCATCGAGTCGCTCATAATCCGATCACTCTAACAAAGCAAAAC AGAAGTGCAGCTGAATGA |
Gene | >Pro_DTO070G2_2|g1281.t1 ATGTCAGTTGAGGAGATACAGGACAAGAACGGCAAGGATATCACTGAAGGTGACTTTGTCTACACCAAGTACAGA GGCGGGTCACATGAGGGCAAGGTAGGATTCCCATAACAAATCTTTCGTTTGTGCTCAAGTCCTACGGCACAAATG ACCCGTAAGTAGGTCGAAATGATCATCAGAGATCAAGCTAGTGCCCAACAAGAAGGTGTGGCCAGCTACCCTAAG GCAAGTCCTCAGCGAGACCAGTTCCCCACGTCGTGGCTAATCCGTGCACGTTATAGGTCATCTACACCGATCAAC ATGGTCATCGAGTCGCTCATAATCCGATCACTCTAACAAAGCAAAACAGAAGTGCAGCTGAATGA |