© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO070G2_2|g1277.t1 |
| Gene name | |
| Location | scaffold_01:3404713..3405482 |
| Strand | + |
| Gene length (bp) | 769 |
| Transcript length (bp) | 648 |
| Coding sequence length (bp) | 648 |
| Protein length (aa) | 216 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05995 | CDO_I | Cysteine dioxygenase type I | 3.7E-41 | 46 | 186 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005506 | iron ion binding | Yes |
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0005488 | binding | No |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
| GO:0043169 | cation binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043167 | ion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0051213 | dioxygenase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO070G2_2|g1277.t1 MSAVIPLLPLGTSSSLGNKHYKPQYSLDDLIQDIKIYLGESGGISSADVDNEYLISLAQKYTSDPNDWARFFYND TSKNYTRNAIENINQKANILLLVWNPGKGSPVHDHANAHCIMKILAGTLQETIYTVPDQDSNLRGPLEIKSDTRH TMNDVAYISDDIGLHRVHNPSADQVAVSLHLYTPPNAADYGYNIYNEVTGKASFIQQAQAVPQKE* |
| Coding | >Pro_DTO070G2_2|g1277.t1 ATGTCCGCTGTCATTCCCTTACTCCCGCTTGGCACCAGCTCATCACTAGGCAACAAGCACTACAAACCTCAATAC AGCCTCGATGATCTCATACAAGACATCAAGATCTACCTAGGCGAGAGTGGCGGTATTTCATCGGCAGACGTGGAC AATGAATACCTGATCTCGCTGGCGCAGAAATATACCTCTGATCCGAACGACTGGGCCCGCTTTTTCTACAACGAT ACCAGCAAGAATTATACCCGCAATGCCATTGAGAACATAAACCAGAAAGCAAATATTCTCCTCCTTGTATGGAAC CCCGGGAAAGGCTCTCCCGTCCACGACCACGCCAATGCACACTGCATCATGAAGATCTTAGCTGGGACGCTTCAA GAGACTATCTACACCGTCCCAGATCAGGACTCTAATCTTCGTGGTCCGTTGGAGATCAAGTCTGATACGAGACAT ACCATGAATGACGTCGCTTATATCTCGGATGATATCGGGCTGCACCGTGTTCATAACCCGAGTGCTGACCAAGTT GCCGTCTCTCTTCACTTGTATACCCCTCCTAATGCTGCCGACTATGGGTACAATATTTACAACGAAGTGACAGGC AAGGCGAGCTTTATACAACAGGCTCAAGCTGTTCCTCAGAAAGAATGA |
| Transcript | >Pro_DTO070G2_2|g1277.t1 ATGTCCGCTGTCATTCCCTTACTCCCGCTTGGCACCAGCTCATCACTAGGCAACAAGCACTACAAACCTCAATAC AGCCTCGATGATCTCATACAAGACATCAAGATCTACCTAGGCGAGAGTGGCGGTATTTCATCGGCAGACGTGGAC AATGAATACCTGATCTCGCTGGCGCAGAAATATACCTCTGATCCGAACGACTGGGCCCGCTTTTTCTACAACGAT ACCAGCAAGAATTATACCCGCAATGCCATTGAGAACATAAACCAGAAAGCAAATATTCTCCTCCTTGTATGGAAC CCCGGGAAAGGCTCTCCCGTCCACGACCACGCCAATGCACACTGCATCATGAAGATCTTAGCTGGGACGCTTCAA GAGACTATCTACACCGTCCCAGATCAGGACTCTAATCTTCGTGGTCCGTTGGAGATCAAGTCTGATACGAGACAT ACCATGAATGACGTCGCTTATATCTCGGATGATATCGGGCTGCACCGTGTTCATAACCCGAGTGCTGACCAAGTT GCCGTCTCTCTTCACTTGTATACCCCTCCTAATGCTGCCGACTATGGGTACAATATTTACAACGAAGTGACAGGC AAGGCGAGCTTTATACAACAGGCTCAAGCTGTTCCTCAGAAAGAATGA |
| Gene | >Pro_DTO070G2_2|g1277.t1 ATGTCCGCTGTCATTCCCTTACTCCCGCTTGGCACCAGCTCATCACTAGGCAACAAGCACTACAAACCTCAATAC AGCCTCGATGATCTCATACAAGACATCAAGATCTACCTAGGCGAGAGTGGCGGTATTTCATCGGCAGACGTGGAC AATGAATACCTGATCTCGCTGGCGCAGAAATATACCTCTGATCCGAACGACTGGGCCCGCTTTTTCTACAACGAT ACCAGCAAGAATTATACCCGCAATGCCATTGAGAACATAAACCAGAAAGCAAATATTGTGAGTTCTATTCTAATC CTATAGAGATACTGTCAACGAGAAAGAATTAGAGACTAACCCCTTCCAGCTCCTCCTTGTATGGAACCCCGGGAA AGGCTCTCCCGTCCACGACCACGCCAATGCACACTGCATCATGAAGATCTTAGCTGGGACGCTTCAAGAGACTAT CTACACCGTCCCAGATCAGGACTCTAATCTTCGTGGTCCGTTGGAGATCAAGTCTGATACGAGACATACCATGAA TGACGTCGCTTATATCTCGGATGATATCGGGCTGCACCGTGTTCATAACCCGAGTGCTGACCAAGTTGCCGTCTC TCTTCACTGTAAGTGCTGAATATGAGATCGAAATGGGAAGCAAATGTTGACGAGCTTCCTAGTGTATACCCCTCC TAATGCTGCCGACTATGGGTACAATATTTACAACGAAGTGACAGGCAAGGCGAGCTTTATACAACAGGCTCAAGC TGTTCCTCAGAAAGAATGA |