Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO070G2_2|g1257.t1
Gene name
Locationscaffold_01:3352878..3353985
Strand+
Gene length (bp)1107
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20520 Ac45-VOA1_TM V0 complex accessory subunit Ac45/VOA1 transmembrane domain 1.7E-17 242 281

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 247 269 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO070G2_2|g1257.t1
MYLSSFGLLALGAAAVNAFRDTSPFFLASTSEVLTNSAYIQTGTSLLENLSSSLSTCPSDYYVVVYQPGVHSSDF
STRKSAPRLGAKMLGKDSSIRSKMSINEVAGLVQPNDVKSILEEKCKAQTTAVDASSGSYPSYFEKGPRIIDVEF
PMLSLGSDRAQQLSGFDGFLADVADRIPSSSKYTILYITSPREFPETDSVIYDISGDSYQDTLHMELKRDYSAQG
SASSQSANSTSLFEEYQYFTPGIFMGLMATFLFLAILYIGIGALSSLEIPYAAFEKDTSAAVQKKAQ*
Coding >Pro_DTO070G2_2|g1257.t1
ATGTATCTCAGCAGTTTCGGGCTATTGGCCCTTGGGGCTGCTGCCGTGAATGCTTTCAGAGATACTTCGCCATTC
TTCCTCGCCTCAACTTCTGAGGTCTTGACGAATTCCGCCTACATCCAGACAGGAACTTCACTCCTCGAGAACCTT
TCCTCATCTCTCAGTACCTGTCCGTCAGATTACTATGTCGTCGTCTACCAGCCTGGTGTGCACAGTTCCGACTTC
TCGACGCGAAAGTCGGCACCCCGCTTAGGTGCGAAGATGCTCGGGAAAGACAGCTCGATCCGGTCCAAGATGAGC
ATCAACGAGGTCGCTGGCCTGGTTCAACCCAATGATGTCAAAAGCATTCTGGAGGAGAAGTGTAAGGCCCAGACT
ACCGCCGTTGACGCTTCCTCTGGATCGTACCCCTCATACTTCGAGAAGGGTCCCCGAATTATTGATGTCGAATTC
CCCATGCTATCGTTAGGTTCCGACCGCGCACAGCAGCTTTCTGGATTTGATGGTTTCCTTGCCGATGTCGCCGAT
CGAATTCCTTCCTCGTCTAAGTATACTATTCTCTACATTACCTCACCGAGGGAGTTCCCCGAGACGGATTCCGTC
ATCTACGACATCTCTGGAGATTCGTACCAAGACACCCTCCACATGGAGCTCAAGCGGGACTACTCCGCGCAAGGC
AGCGCCTCGAGCCAGTCGGCCAATTCCACCTCTCTCTTCGAAGAATATCAATACTTCACCCCAGGCATCTTCATG
GGACTCATGGCTACCTTCCTGTTCCTCGCAATTTTGTATATTGGCATCGGTGCTCTAAGCAGCCTCGAGATTCCC
TATGCCGCATTTGAGAAGGACACCTCGGCTGCTGTGCAAAAGAAAGCGCAGTGA
Transcript >Pro_DTO070G2_2|g1257.t1
ATGTATCTCAGCAGTTTCGGGCTATTGGCCCTTGGGGCTGCTGCCGTGAATGCTTTCAGAGATACTTCGCCATTC
TTCCTCGCCTCAACTTCTGAGGTCTTGACGAATTCCGCCTACATCCAGACAGGAACTTCACTCCTCGAGAACCTT
TCCTCATCTCTCAGTACCTGTCCGTCAGATTACTATGTCGTCGTCTACCAGCCTGGTGTGCACAGTTCCGACTTC
TCGACGCGAAAGTCGGCACCCCGCTTAGGTGCGAAGATGCTCGGGAAAGACAGCTCGATCCGGTCCAAGATGAGC
ATCAACGAGGTCGCTGGCCTGGTTCAACCCAATGATGTCAAAAGCATTCTGGAGGAGAAGTGTAAGGCCCAGACT
ACCGCCGTTGACGCTTCCTCTGGATCGTACCCCTCATACTTCGAGAAGGGTCCCCGAATTATTGATGTCGAATTC
CCCATGCTATCGTTAGGTTCCGACCGCGCACAGCAGCTTTCTGGATTTGATGGTTTCCTTGCCGATGTCGCCGAT
CGAATTCCTTCCTCGTCTAAGTATACTATTCTCTACATTACCTCACCGAGGGAGTTCCCCGAGACGGATTCCGTC
ATCTACGACATCTCTGGAGATTCGTACCAAGACACCCTCCACATGGAGCTCAAGCGGGACTACTCCGCGCAAGGC
AGCGCCTCGAGCCAGTCGGCCAATTCCACCTCTCTCTTCGAAGAATATCAATACTTCACCCCAGGCATCTTCATG
GGACTCATGGCTACCTTCCTGTTCCTCGCAATTTTGTATATTGGCATCGGTGCTCTAAGCAGCCTCGAGATTCCC
TATGCCGCATTTGAGAAGGACACCTCGGCTGCTGTGCAAAAGAAAGCGCAGTGA
Gene >Pro_DTO070G2_2|g1257.t1
ATGTATCTCAGCAGTTTCGGGCTATTGGCCCTTGGGGCTGCTGCCGTGAATGCTTTCAGAGATACTTCGCCATTC
TTCCTCGCCTCAACTTCTGAGTATGCTTGATTGAATCTCTCGCGCTGCGGTTAACTAATCGGTCCTCCCTTAGGG
TCTTGACGAATTCCGCCTACATCCAGACAGGAACTTCACTCCTCGAGAACCTTTCCTCATCTCTCAGTACCTGTC
CGTCAGATTACTATGTCGTCGTCTACCAGCCTGGTGTGCACAGTTCCGACTTCTCGACGCGAAAGTCGGCACCCC
GCTTAGGTGCGAAGATGCTCGGGAAAGACAGCTCGATCCGGTCCAAGATGAGCATCAACGAGGTCGCTGGCCTGG
TTCAACCCAATGATGTCAAAAGCATTCTGGAGGAGAAGTGTAAGGCCCAGACTACCGCCGTTGACGCTTCCTGTA
AGTTGCTTTGATGGCCAACGACGGAACTTGGCAAAACCCGCGAAGGACGTCAGAGCTAACAATGTGAAGCTGGAT
CGTACCCCTCATACTTCGAGAAGGGTCCCCGAATTATTGATGTCGAATTCCCCATGCTATCGTTAGGTTCCGACC
GCGCACAGCAGCTTTCTGGATTTGGTATGTATGCAGTCCGCCTATGCACTTGTTTCTCACTAACTCTGCTAGATG
GTTTCCTTGCCGATGTCGCCGATCGAATTCCTTCCTCGTCTAAGTATACTATTCTCTACATTACCTCACCGAGGG
AGTTCCCCGAGACGGATTCCGTCATCTACGACATCTCTGGAGATTCGTACCAAGACACCCTCCACATGGAGCTCA
AGCGGGACTACTCCGCGCAAGGCAGCGCCTCGAGCCAGTCGGCCAATTCCACCTCTCTCTTCGAAGAATATCAAT
ACTTCACCCCAGGTATGTATCTATCAATCCCACCTTCTATCTATTCACTATGCTCACCCTTCTCCAGGCATCTTC
ATGGGACTCATGGCTACCTTCCTGTTCCTCGCAATTTTGTATATTGGCATCGGTGCTCTAAGCAGCCTCGAGATT
CCCTATGCCGCATTTGAGAAGGACACCTCGGCTGCTGTGCAAAAGAAAGCGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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