Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO046C5_2|g6978.t1
Gene name
Locationscaffold_020:214912..216111
Strand-
Gene length (bp)1199
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03947 Ribosomal_L2_C Ribosomal Proteins L2, C-terminal domain 1.0E-41 108 234
PF00181 Ribosomal_L2 Ribosomal Proteins L2, RNA binding domain 3.8E-12 21 99

GO

GO Term Description Terminal node
GO:0006412 translation Yes
GO:0003735 structural constituent of ribosome Yes
GO:0005840 ribosome Yes
GO:0009058 biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0044237 cellular metabolic process No
GO:0043228 non-membrane-bounded organelle No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0003674 molecular_function No
GO:0044260 cellular macromolecule metabolic process No
GO:0043603 cellular amide metabolic process No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0043229 intracellular organelle No
GO:0005198 structural molecule activity No
GO:1901576 organic substance biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0019538 protein metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0006518 peptide metabolic process No
GO:0034645 cellular macromolecule biosynthetic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0043604 amide biosynthetic process No
GO:0110165 cellular anatomical entity No
GO:0043170 macromolecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0044249 cellular biosynthetic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0043043 peptide biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup5644
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g6233.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g5724.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g6348.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g1255.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g1194.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g4307.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g3257.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g5267.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1448.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g2254.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g1061.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g5167.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g4752.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g4843.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g5067.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g2502.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g3096.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g6978.t1 (this protein)
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g6162.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g2825.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g3001.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g6837.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g2265.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g6756.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g888.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g3539.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g3337.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g4170.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g4569.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g4832.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g5120.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g2351.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g7109.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g5585.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO046C5_2|g6978.t1
MLLFHFETVAMGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRH
PYKFKMVTETFIANEGMYTGQFIYAGKNAALTVGNVLPLGSMPEGTVVSNVEEKAGDRGALGRTSGNYVTIIGHN
PEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGN
HQHIGKASTISRYATQGQKAGLIAARRTGLLRGTQKTKD*
Coding >Pro_DTO046C5_2|g6978.t1
ATGCTCCTATTTCACTTCGAGACAGTCGCCATGGGTCGTGTCATCCGCAACCAGAGGAAGGGCCGTGGCTCCATT
TTCACGGCCAACACCCGCCTGAACAAGGCCCCTGCCCAATTCCGGACCCTCGACTTCGCTGAGGCTCACGGTTAC
ACCCGTGGTGTCGTCAAGGAGATCATCCACGATGCCGGTCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGCCAC
CCCTACAAGTTCAAGATGGTCACCGAGACTTTCATCGCCAACGAGGGCATGTACACCGGCCAGTTCATCTACGCC
GGTAAGAACGCTGCCCTGACCGTCGGCAACGTCCTCCCTCTCGGCTCCATGCCCGAGGGTACCGTCGTCTCCAAC
GTCGAGGAGAAGGCTGGTGACCGTGGTGCGCTTGGCCGTACCTCCGGTAACTACGTTACCATTATTGGCCACAAC
CCCGAGGATGGCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAAGGTCATCAAGAACACCGCCCGCGGTATG
GTTGGTATCGTTGCCGGTGGTGGCCGTACCGACAAGCCTTTGCTCAAGGCCGGTCGTGCCAAGCACAAGTTCGCC
GTCAAGCGCAACTCTTGGCCCAAGACTCGTGGTGTTGCCATGAACCCCGTCGATCACCCCCACGGTGGTGGTAAC
CACCAGCACATCGGTAAGGCCTCGACCATCTCCCGCTACGCTACCCAGGGTCAAAAGGCTGGTCTCATTGCCGCC
CGCAGAACTGGTCTGCTCCGCGGTACCCAGAAGACCAAGGATTAA
Transcript >Pro_DTO046C5_2|g6978.t1
ATGCTCCTATTTCACTTCGAGACAGTCGCCATGGGTCGTGTCATCCGCAACCAGAGGAAGGGCCGTGGCTCCATT
TTCACGGCCAACACCCGCCTGAACAAGGCCCCTGCCCAATTCCGGACCCTCGACTTCGCTGAGGCTCACGGTTAC
ACCCGTGGTGTCGTCAAGGAGATCATCCACGATGCCGGTCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGCCAC
CCCTACAAGTTCAAGATGGTCACCGAGACTTTCATCGCCAACGAGGGCATGTACACCGGCCAGTTCATCTACGCC
GGTAAGAACGCTGCCCTGACCGTCGGCAACGTCCTCCCTCTCGGCTCCATGCCCGAGGGTACCGTCGTCTCCAAC
GTCGAGGAGAAGGCTGGTGACCGTGGTGCGCTTGGCCGTACCTCCGGTAACTACGTTACCATTATTGGCCACAAC
CCCGAGGATGGCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAAGGTCATCAAGAACACCGCCCGCGGTATG
GTTGGTATCGTTGCCGGTGGTGGCCGTACCGACAAGCCTTTGCTCAAGGCCGGTCGTGCCAAGCACAAGTTCGCC
GTCAAGCGCAACTCTTGGCCCAAGACTCGTGGTGTTGCCATGAACCCCGTCGATCACCCCCACGGTGGTGGTAAC
CACCAGCACATCGGTAAGGCCTCGACCATCTCCCGCTACGCTACCCAGGGTCAAAAGGCTGGTCTCATTGCCGCC
CGCAGAACTGGTCTGCTCCGCGGTACCCAGAAGACCAAGGATTAA
Gene >Pro_DTO046C5_2|g6978.t1
ATGCTGTAGTTCAAGCCAATTCAAGTAAGCGACCATGCGCTATACCCGATTGGGTTAGATTAGCGACCGCACCCT
AAAGCCCACACAAGTCCCCGTGTCCGATGATTTCTCAACTCGTCAACGACAAGCCTATTTCACTTCGAGGTACGC
TTACCACTTTTCCACGACACTTCTGTCCGGCTTCCATACTAACATAGGATCCTCGTCTAGACAGTCGCCATGGGT
CGTGTCATCCGCAACCAGAGGAAGGGCCGTGGCTCCATTTTCAGTGAGTGCGACCGCAAACCATTCCCGCACGAA
ATTTTGAGGCTGCGCATCCCGAGCAGCGAGGAGGAAATGAAGAATACCATTGGAAGACCACACAGATTCGCAAGG
AGATTGGAGTGCTGATTACGAATTTTTCTCTACTTTACAGCGGCCAACACCCGCCTGAACAAGGCCCCTGCCCAA
TTCCGGACCCTCGACTTCGCTGAGGCTCACGGTTACACCCGTGGTGTCGTCAAGGAGATCATCCACGATGCCGGT
CGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGCCACCCCTACAAGTTCAAGATGGTCACCGAGACTTTCATCGCC
AACGAGGGCATGTACACCGGCCAGTTCATCTACGCCGGTAAGAACGCTGCCCTGACCGTCGGCAACGTCCTCCCT
CTCGGCTCCATGCCCGAGGGTACCGTCGTCTCCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCGCTTGGCCGT
ACCTCCGGTAACTACGTTACCATTATTGGCCACAACCCCGAGGATGGCAAGACCCGTGTCAAGCTCCCCTCCGGT
GCCAAGAAGGTCATCAAGAACACCGCCCGCGGTATGGTTGGTATCGTTGCCGGTGGTGGCCGTACCGACAAGCCT
TTGCTCAAGGCCGGTCGTGCCAAGCACAAGTTCGCCGTCAAGCGCAACTCTTGGCCCAAGACTCGTGGTGTTGCC
ATGAACCCCGTCGATCACGTAAGTTTCCGTCTATACACAGATCCGATAACATCCAGGACCGCAATCTCTAACATC
TCTCTCTACAGCCCCACGGTGGTGGTAACCACCAGCACATCGGTAAGGCCTCGACCATCTCCCGCTACGCTACCC
AGGGTCAAAAGGCTGGTCTCATTGCCGCCCGCAGAACTGGTCTGCTCCGCGGTACCCAGAAGACCAAGGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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