Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO013F2_2|g1182.t1
Gene name
Locationscaffold_003:381821..383295
Strand-
Gene length (bp)1474
Transcript length (bp)1308
Coding sequence length (bp)1308
Protein length (aa) 436

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 7.9E-12 297 338
PF17123 zf-RING_11 RING-like zinc finger 5.3E-11 297 324
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.7E-07 296 342
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.2E-09 297 337
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.4E-05 297 337

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No
GO:0043169 cation binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup2929
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g3374.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g4804.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g5428.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g50.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g8380.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g3555.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g2335.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g523.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1857.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g10083.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g682.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g5017.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g1182.t1 (this protein)
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g3771.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g6257.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g4332.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g6958.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g3375.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g2288.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g6429.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g4505.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g1276.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5602.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g441.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g2984.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g4647.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g4614.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g1982.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g4874.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g1639.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g702.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g1635.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g523.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g5732.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO013F2_2|g1182.t1
MDTGDRMLCHACGGVWTKDGDFLTCPHCQSEFTEIIEIPPEISPEGSPSRRADSVSPSRVSPWLDHNPWEQDTQE
QQGPGFFGRATPPFSSLRTYRSPDGRFSFSSATLETGRPSGQRNNGPNPVVPMMMHGFDTIFQNLMEPNARGYRG
FGEDPFHPQSSTAPDWLEDDHLTGHHPGLSPRNADAPQPVNRNPTDINEIMDAIRADIGVQTTRRSRGGRNPASP
HALSILSALLNMSRSGDAVYSQEELDRVITQLVDNPGGTSTAAPPASDAAVQALPKKKITEEMMGSEGKAVCSIC
MDNVELGLEVTVLPCAHWFHYNCIHAWLTQHDTCPHCRRSINSNTTGGEGTPENPVVIRDSPEQPRSQPRRSSAR
TVRSGRSSLSSSLQSRLSTRMSPPGSPTPEGGESRNRRSSRGEGVGGLAGWLTNRFGSSA*
Coding >Pro_DTO013F2_2|g1182.t1
ATGGACACTGGCGACCGCATGTTATGCCATGCCTGTGGCGGGGTTTGGACTAAGGATGGTGATTTTTTGACGTGC
CCACATTGTCAATCGGAGTTCACAGAAATAATTGAAATCCCCCCAGAAATATCTCCCGAAGGCTCCCCCTCACGC
CGTGCGGACTCCGTATCGCCTTCGCGCGTTAGCCCATGGTTAGACCACAATCCGTGGGAACAAGACACGCAAGAA
CAGCAAGGCCCCGGGTTTTTCGGAAGGGCTACTCCTCCATTTTCCTCCTTGCGCACATACAGATCGCCGGACGGT
CGCTTCTCATTCAGCAGCGCGACACTTGAGACCGGAAGGCCTTCTGGTCAGCGCAACAATGGCCCGAACCCTGTG
GTTCCGATGATGATGCACGGCTTTGACACAATTTTTCAAAATTTAATGGAGCCAAATGCCCGTGGTTACAGAGGC
TTTGGAGAGGACCCCTTCCATCCTCAATCCTCTACCGCTCCCGACTGGCTCGAGGACGACCACCTTACTGGCCAT
CACCCAGGCCTCTCTCCCCGCAATGCAGATGCGCCTCAACCTGTCAACCGCAACCCGACAGACATAAATGAAATC
ATGGACGCCATTCGTGCTGACATTGGAGTACAAACTACACGACGCTCACGTGGAGGTCGTAACCCGGCAAGCCCA
CATGCTCTTTCGATATTGTCTGCCCTTCTCAACATGAGTCGAAGCGGGGATGCAGTCTATTCGCAGGAGGAGCTC
GACCGAGTCATCACACAACTGGTTGATAATCCTGGAGGGACTAGCACTGCGGCACCGCCAGCATCTGATGCTGCC
GTCCAAGCTTTGCCGAAGAAGAAGATCACTGAAGAGATGATGGGATCTGAAGGAAAAGCAGTGTGTTCGATTTGC
ATGGATAACGTTGAACTCGGCTTGGAAGTCACTGTGTTACCATGCGCTCACTGGTTTCATTACAACTGCATCCAT
GCATGGCTGACCCAGCATGACACTTGTCCGCATTGCCGGCGCAGCATCAATTCAAATACAACAGGCGGAGAAGGC
ACCCCTGAGAATCCGGTAGTGATCCGGGATAGTCCTGAGCAGCCGAGATCCCAACCGCGTCGCAGTTCTGCTCGC
ACTGTGCGCAGCGGTCGATCCTCATTATCTTCTTCATTGCAGAGTCGGCTTTCCACTCGAATGTCACCACCCGGG
TCCCCTACACCAGAGGGAGGGGAATCCAGAAACCGTCGGTCTAGCCGGGGTGAGGGTGTTGGGGGACTCGCCGGT
TGGCTTACGAACCGATTTGGAAGCAGCGCATGA
Transcript >Pro_DTO013F2_2|g1182.t1
ATGGACACTGGCGACCGCATGTTATGCCATGCCTGTGGCGGGGTTTGGACTAAGGATGGTGATTTTTTGACGTGC
CCACATTGTCAATCGGAGTTCACAGAAATAATTGAAATCCCCCCAGAAATATCTCCCGAAGGCTCCCCCTCACGC
CGTGCGGACTCCGTATCGCCTTCGCGCGTTAGCCCATGGTTAGACCACAATCCGTGGGAACAAGACACGCAAGAA
CAGCAAGGCCCCGGGTTTTTCGGAAGGGCTACTCCTCCATTTTCCTCCTTGCGCACATACAGATCGCCGGACGGT
CGCTTCTCATTCAGCAGCGCGACACTTGAGACCGGAAGGCCTTCTGGTCAGCGCAACAATGGCCCGAACCCTGTG
GTTCCGATGATGATGCACGGCTTTGACACAATTTTTCAAAATTTAATGGAGCCAAATGCCCGTGGTTACAGAGGC
TTTGGAGAGGACCCCTTCCATCCTCAATCCTCTACCGCTCCCGACTGGCTCGAGGACGACCACCTTACTGGCCAT
CACCCAGGCCTCTCTCCCCGCAATGCAGATGCGCCTCAACCTGTCAACCGCAACCCGACAGACATAAATGAAATC
ATGGACGCCATTCGTGCTGACATTGGAGTACAAACTACACGACGCTCACGTGGAGGTCGTAACCCGGCAAGCCCA
CATGCTCTTTCGATATTGTCTGCCCTTCTCAACATGAGTCGAAGCGGGGATGCAGTCTATTCGCAGGAGGAGCTC
GACCGAGTCATCACACAACTGGTTGATAATCCTGGAGGGACTAGCACTGCGGCACCGCCAGCATCTGATGCTGCC
GTCCAAGCTTTGCCGAAGAAGAAGATCACTGAAGAGATGATGGGATCTGAAGGAAAAGCAGTGTGTTCGATTTGC
ATGGATAACGTTGAACTCGGCTTGGAAGTCACTGTGTTACCATGCGCTCACTGGTTTCATTACAACTGCATCCAT
GCATGGCTGACCCAGCATGACACTTGTCCGCATTGCCGGCGCAGCATCAATTCAAATACAACAGGCGGAGAAGGC
ACCCCTGAGAATCCGGTAGTGATCCGGGATAGTCCTGAGCAGCCGAGATCCCAACCGCGTCGCAGTTCTGCTCGC
ACTGTGCGCAGCGGTCGATCCTCATTATCTTCTTCATTGCAGAGTCGGCTTTCCACTCGAATGTCACCACCCGGG
TCCCCTACACCAGAGGGAGGGGAATCCAGAAACCGTCGGTCTAGCCGGGGTGAGGGTGTTGGGGGACTCGCCGGT
TGGCTTACGAACCGATTTGGAAGCAGCGCATGA
Gene >Pro_DTO013F2_2|g1182.t1
ATGGACACTGGCGACCGCATGTTATGCCATGCCTGTGGCGGGGTTTGGACTAAGGATGGTGATTTTTTGACGTGC
CCACATTGTCAATCGGAGTTCACAGAAATAGTACAGCGAATACTTTCTCTCTTGGTTTATTTAATTCTGACACTG
TCGCTTCCTCTAGATTGAAATCCCCCCAGAAATATCTCCCGAAGGCTCCCCCTCACGCCGTGCGGACTCCGTATC
GCCTTCGCGCGTTAGCCCATGGTTAGACCACAATCCGTGGGAACAAGACACGCAAGAACAGCAAGGCCCCGGGTT
TTTCGGAAGGGCTACTCCTCCATTTTCCTCCTTGCGCACATACAGATCGCCGGACGGTCGCTTCTCATTCAGCAG
CGCGACACTTGAGACCGGAAGGCCTTCTGGTCAGCGCAACAATGGCCCGAACCCTGTGGTTCCGATGATGATGCA
CGGCTTTGACACAATTTTTCAAAATTTAATGGAGCCAAATGCCCGTGGTTACAGAGGCTTTGGAGAGGACCCCTT
CCATCCTCAATCCTCTACCGCTCCCGACTGGCTCGAGGACGACCACCTTACTGGCCATCACCCAGGCCTCTCTCC
CCGCAATGCAGATGCGCCTCAACCTGTCAACCGCAACCCGACAGACATAAATGAGTATGTACTTGGCTACTATGT
TGCATTATCACCAGACTAATCAAATCTAGAATCATGGACGCCATTCGTGCTGACATTGGAGTACAAACTACACGA
CGCTCACGTGGAGGTCGTAACCCGGCAAGCCCACATGCTCTTTCGATATTGTCTGCCCTTCTCAACATGAGTCGA
AGCGGGGATGCAGTCTATTCGCAGGAGGAGCTCGACCGAGTCATCACACAACTGGTTGATAATCCTGGAGGGACT
AGCACTGCGGCACCGCCAGCATCTGATGCTGCCGTCCAAGCTTTGCCGAAGAAGAAGATCACTGAAGAGATGATG
GGATCTGAAGGAAAAGCAGTGTGTTCGATTTGCATGGATAACGTTGAACTCGGCTTGGAAGTCACTGTGTTACCA
TGCGCTCACTGGTTTCATTACAACTGCATCCATGCATGGCTGACCCAGCATGACACTTGTCCGCATTGCCGGCGC
AGCATCAATTCAAATACAACGTAAGTATGTGAGTCGTATCCATGAACGACGACTCTCAGTTGACGGTATATCTCA
CAGAGGCGGAGAAGGCACCCCTGAGAATCCGGTAGTGATCCGGGATAGTCCTGAGCAGCCGAGATCCCAACCGCG
TCGCAGTTCTGCTCGCACTGTGCGCAGCGGTCGATCCTCATTATCTTCTTCATTGCAGAGTCGGCTTTCCACTCG
AATGTCACCACCCGGGTCCCCTACACCAGAGGGAGGGGAATCCAGAAACCGTCGGTCTAGCCGGGGTGAGGGTGT
TGGGGGACTCGCCGGTTGGCTTACGAACCGATTTGGAAGCAGCGCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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