Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO012A9_2|g5338.t1
Gene name
Locationscaffold_024:38608..39904
Strand+
Gene length (bp)1296
Transcript length (bp)1296
Coding sequence length (bp)1296
Protein length (aa) 432

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04090 RNA_pol_I_TF RNA polymerase I specific initiation factor 9.7E-09 102 349

GO

GO Term Description Terminal node
GO:0006361 transcription initiation from RNA polymerase I promoter Yes
GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding Yes
GO:0001181 RNA polymerase I general transcription initiation factor activity Yes
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0044237 cellular metabolic process No
GO:1990837 sequence-specific double-stranded DNA binding No
GO:0046483 heterocycle metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0001067 transcription regulatory region nucleic acid binding No
GO:1901360 organic cyclic compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0003690 double-stranded DNA binding No
GO:0043170 macromolecule metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0003674 molecular_function No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043565 sequence-specific DNA binding No
GO:0003676 nucleic acid binding No
GO:0071704 organic substance metabolic process No
GO:0000976 transcription cis-regulatory region binding No
GO:0001163 RNA polymerase I transcription regulatory region sequence-specific DNA binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009058 biosynthetic process No
GO:0140223 general transcription initiation factor activity No
GO:1901363 heterocyclic compound binding No
GO:0006807 nitrogen compound metabolic process No
GO:0006352 DNA-templated transcription, initiation No
GO:0019438 aromatic compound biosynthetic process No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0009059 macromolecule biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0001046 core promoter sequence-specific DNA binding No
GO:0003677 DNA binding No
GO:0097159 organic cyclic compound binding No
GO:0009987 cellular process No
GO:0044238 primary metabolic process No
GO:0016070 RNA metabolic process No
GO:0008152 metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup6937
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g7633.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g2585.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g3159.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g7708.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g4521.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g7030.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g3461.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g3879.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g304.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8835.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g5338.t1 (this protein)
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g2734.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g5653.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g2836.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g2306.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g4701.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g1929.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g1493.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g6815.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g3160.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g8150.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g3566.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5780.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g4313.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g5881.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g7265.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g5005.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g1394.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g5258.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g6210.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g3922.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g6645.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g3479.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g4604.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO012A9_2|g5338.t1
MAALSSSIFSLPLPPWLQPPGTRVSRYDRRKRKRSVGWSESELNGEETTDIASATESEPAGPPLVLTPNESHQYR
IAGFPSNQELPKGHFPHKADNDEQSRRETASRHLKDLAGLSPPIYPPQSTQQGNLRFQHLSALTAILHRCMLQGD
YVRAGRAWGMILREDYRGFRMDVRSEGRWGIGAEILLRRDEQEIPANLGTIKVPNAMDSTPINFTTKGFAAAKEY
YERLILNHPFMKSSPQSISSLHFYPAMFGLWVYITQEESKATRKNITLRQEEEPDEFSEDDNSESEFGHPRKSQN
KTDAAITAIRALELAQAQQIAARMDQLLGSPPYSDSPELLELRGMICLWIGDLLLLTLPLPAHFEDYDDHDPMLM
DRTPGSLEARREHRLATEKKAAEVQRSIELFEKAKKRGRGVAYNLESLHIDDDSAD*
Coding >Pro_DTO012A9_2|g5338.t1
ATGGCTGCGCTGTCGTCTTCGATTTTTTCTCTACCGCTACCGCCTTGGCTCCAGCCGCCTGGCACTCGCGTATCT
CGATATGACCGCCGGAAACGCAAAAGGAGTGTGGGGTGGAGTGAAAGCGAGCTGAACGGCGAAGAAACAACGGAT
ATCGCCTCGGCTACGGAATCTGAGCCCGCTGGGCCTCCCTTGGTCTTGACACCAAATGAATCCCATCAATACCGA
ATTGCCGGTTTCCCATCCAACCAAGAATTGCCGAAAGGCCATTTCCCTCATAAGGCAGATAATGATGAGCAATCT
AGAAGAGAGACTGCCTCACGCCACCTCAAAGACTTAGCGGGATTATCACCTCCAATCTACCCTCCTCAGTCGACC
CAGCAAGGCAACCTTCGCTTCCAACACCTAAGTGCATTGACAGCCATTTTACATCGATGTATGCTCCAAGGTGAT
TACGTTCGAGCCGGACGAGCTTGGGGCATGATCTTGCGCGAAGATTACAGAGGCTTTCGAATGGACGTCCGCAGT
GAAGGAAGGTGGGGCATTGGCGCTGAAATTTTGCTACGGCGTGACGAACAGGAAATCCCAGCCAATCTTGGTACC
ATTAAGGTGCCGAATGCGATGGACAGCACACCCATCAATTTTACCACCAAGGGCTTTGCGGCAGCTAAAGAATAT
TATGAACGACTTATTCTCAATCACCCATTCATGAAATCTTCACCACAGTCTATCTCCTCTTTGCACTTCTACCCT
GCAATGTTTGGGCTTTGGGTGTATATCACACAGGAAGAAAGCAAGGCAACTAGGAAAAATATTACCCTTCGCCAA
GAAGAAGAGCCTGATGAGTTTTCTGAGGATGACAATTCAGAATCTGAATTTGGCCACCCTCGGAAGTCACAAAAC
AAGACAGATGCTGCCATCACAGCAATTAGGGCACTGGAGTTGGCACAGGCGCAGCAAATTGCTGCGCGTATGGAC
CAGCTCCTAGGGTCTCCTCCATACTCGGACTCGCCAGAATTGCTGGAGCTCAGAGGCATGATCTGTTTGTGGATC
GGTGATCTGTTGCTGCTCACTCTACCATTACCGGCCCACTTCGAAGACTACGACGACCACGACCCAATGCTCATG
GATAGGACCCCAGGCTCTCTTGAAGCGAGACGTGAGCACAGGCTTGCAACCGAAAAGAAAGCAGCTGAAGTCCAA
AGATCGATTGAGCTCTTCGAGAAGGCCAAGAAACGAGGCAGGGGTGTTGCATACAATCTGGAGAGTCTTCATATT
GATGATGATTCTGCTGATTGA
Transcript >Pro_DTO012A9_2|g5338.t1
ATGGCTGCGCTGTCGTCTTCGATTTTTTCTCTACCGCTACCGCCTTGGCTCCAGCCGCCTGGCACTCGCGTATCT
CGATATGACCGCCGGAAACGCAAAAGGAGTGTGGGGTGGAGTGAAAGCGAGCTGAACGGCGAAGAAACAACGGAT
ATCGCCTCGGCTACGGAATCTGAGCCCGCTGGGCCTCCCTTGGTCTTGACACCAAATGAATCCCATCAATACCGA
ATTGCCGGTTTCCCATCCAACCAAGAATTGCCGAAAGGCCATTTCCCTCATAAGGCAGATAATGATGAGCAATCT
AGAAGAGAGACTGCCTCACGCCACCTCAAAGACTTAGCGGGATTATCACCTCCAATCTACCCTCCTCAGTCGACC
CAGCAAGGCAACCTTCGCTTCCAACACCTAAGTGCATTGACAGCCATTTTACATCGATGTATGCTCCAAGGTGAT
TACGTTCGAGCCGGACGAGCTTGGGGCATGATCTTGCGCGAAGATTACAGAGGCTTTCGAATGGACGTCCGCAGT
GAAGGAAGGTGGGGCATTGGCGCTGAAATTTTGCTACGGCGTGACGAACAGGAAATCCCAGCCAATCTTGGTACC
ATTAAGGTGCCGAATGCGATGGACAGCACACCCATCAATTTTACCACCAAGGGCTTTGCGGCAGCTAAAGAATAT
TATGAACGACTTATTCTCAATCACCCATTCATGAAATCTTCACCACAGTCTATCTCCTCTTTGCACTTCTACCCT
GCAATGTTTGGGCTTTGGGTGTATATCACACAGGAAGAAAGCAAGGCAACTAGGAAAAATATTACCCTTCGCCAA
GAAGAAGAGCCTGATGAGTTTTCTGAGGATGACAATTCAGAATCTGAATTTGGCCACCCTCGGAAGTCACAAAAC
AAGACAGATGCTGCCATCACAGCAATTAGGGCACTGGAGTTGGCACAGGCGCAGCAAATTGCTGCGCGTATGGAC
CAGCTCCTAGGGTCTCCTCCATACTCGGACTCGCCAGAATTGCTGGAGCTCAGAGGCATGATCTGTTTGTGGATC
GGTGATCTGTTGCTGCTCACTCTACCATTACCGGCCCACTTCGAAGACTACGACGACCACGACCCAATGCTCATG
GATAGGACCCCAGGCTCTCTTGAAGCGAGACGTGAGCACAGGCTTGCAACCGAAAAGAAAGCAGCTGAAGTCCAA
AGATCGATTGAGCTCTTCGAGAAGGCCAAGAAACGAGGCAGGGGTGTTGCATACAATCTGGAGAGTCTTCATATT
GATGATGATTCTGCTGATTGA
Gene >Pro_DTO012A9_2|g5338.t1
ATGGCTGCGCTGTCGTCTTCGATTTTTTCTCTACCGCTACCGCCTTGGCTCCAGCCGCCTGGCACTCGCGTATCT
CGATATGACCGCCGGAAACGCAAAAGGAGTGTGGGGTGGAGTGAAAGCGAGCTGAACGGCGAAGAAACAACGGAT
ATCGCCTCGGCTACGGAATCTGAGCCCGCTGGGCCTCCCTTGGTCTTGACACCAAATGAATCCCATCAATACCGA
ATTGCCGGTTTCCCATCCAACCAAGAATTGCCGAAAGGCCATTTCCCTCATAAGGCAGATAATGATGAGCAATCT
AGAAGAGAGACTGCCTCACGCCACCTCAAAGACTTAGCGGGATTATCACCTCCAATCTACCCTCCTCAGTCGACC
CAGCAAGGCAACCTTCGCTTCCAACACCTAAGTGCATTGACAGCCATTTTACATCGATGTATGCTCCAAGGTGAT
TACGTTCGAGCCGGACGAGCTTGGGGCATGATCTTGCGCGAAGATTACAGAGGCTTTCGAATGGACGTCCGCAGT
GAAGGAAGGTGGGGCATTGGCGCTGAAATTTTGCTACGGCGTGACGAACAGGAAATCCCAGCCAATCTTGGTACC
ATTAAGGTGCCGAATGCGATGGACAGCACACCCATCAATTTTACCACCAAGGGCTTTGCGGCAGCTAAAGAATAT
TATGAACGACTTATTCTCAATCACCCATTCATGAAATCTTCACCACAGTCTATCTCCTCTTTGCACTTCTACCCT
GCAATGTTTGGGCTTTGGGTGTATATCACACAGGAAGAAAGCAAGGCAACTAGGAAAAATATTACCCTTCGCCAA
GAAGAAGAGCCTGATGAGTTTTCTGAGGATGACAATTCAGAATCTGAATTTGGCCACCCTCGGAAGTCACAAAAC
AAGACAGATGCTGCCATCACAGCAATTAGGGCACTGGAGTTGGCACAGGCGCAGCAAATTGCTGCGCGTATGGAC
CAGCTCCTAGGGTCTCCTCCATACTCGGACTCGCCAGAATTGCTGGAGCTCAGAGGCATGATCTGTTTGTGGATC
GGTGATCTGTTGCTGCTCACTCTACCATTACCGGCCCACTTCGAAGACTACGACGACCACGACCCAATGCTCATG
GATAGGACCCCAGGCTCTCTTGAAGCGAGACGTGAGCACAGGCTTGCAACCGAAAAGAAAGCAGCTGAAGTCCAA
AGATCGATTGAGCTCTTCGAGAAGGCCAAGAAACGAGGCAGGGGTGTTGCATACAATCTGGAGAGTCTTCATATT
GATGATGATTCTGCTGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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