Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO012A7_2|g2413.t1
Gene name
Locationscaffold_04:83081..83509
Strand-
Gene length (bp)428
Transcript length (bp)375
Coding sequence length (bp)375
Protein length (aa) 125

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.1E-04 64 100

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0046872 metal ion binding No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0003700 DNA-binding transcription factor activity No
GO:0051252 regulation of RNA metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0008150 biological_process No
GO:0031323 regulation of cellular metabolic process No
GO:0005488 binding No
GO:0009889 regulation of biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0060255 regulation of macromolecule metabolic process No
GO:0140110 transcription regulator activity No
GO:0050789 regulation of biological process No
GO:0043167 ion binding No
GO:0050794 regulation of cellular process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0019222 regulation of metabolic process No
GO:0003674 molecular_function No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043169 cation binding No
GO:0065007 biological regulation No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0080090 regulation of primary metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 10 Decorating

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID2
Orthogroup3770
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g4275.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g7897.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g7751.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g4149.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g5187.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g2700.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g8525.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g6098.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g2413.t1 (this protein)
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g4814.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g8658.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g2288.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g7496.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g3623.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g7900.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g5368.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g1008.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g2041.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g2451.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g9213.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g8458.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g2090.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g624.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g275.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g2818.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g8089.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g1466.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g3456.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g8041.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g1802.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g7581.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g4754.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g686.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g9318.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO012A7_2|g2413.t1
MNVLVKGEHEHREQIPRDMPTYEQMESGLCGRVSQWLWSGWRGTAFEGASPDLQKPYQLNHGDCKACREQHTTCD
HTRPQCSHCWSQQLLCFYVDPKRRKQKNIRKATFSEVETSSGLIKDTTA*
Coding >Pro_DTO012A7_2|g2413.t1
ATGAACGTTTTAGTAAAAGGAGAACATGAACACCGAGAACAGATCCCTCGTGATATGCCTACATACGAGCAGATG
GAGAGTGGACTTTGCGGTCGCGTCTCCCAGTGGCTATGGTCTGGATGGCGGGGTACGGCATTCGAAGGTGCTTCC
CCAGATTTGCAAAAGCCATACCAGCTGAATCATGGGGACTGTAAGGCCTGTCGTGAACAACATACTACCTGTGAT
CATACACGACCTCAGTGCTCTCATTGTTGGTCACAGCAGCTCTTGTGCTTCTATGTGGACCCGAAACGGAGGAAA
CAGAAAAATATTCGGAAGGCAACTTTCAGTGAAGTGGAAACGAGTTCCGGGTTGATCAAGGACACGACAGCGTGA
Transcript >Pro_DTO012A7_2|g2413.t1
ATGAACGTTTTAGTAAAAGGAGAACATGAACACCGAGAACAGATCCCTCGTGATATGCCTACATACGAGCAGATG
GAGAGTGGACTTTGCGGTCGCGTCTCCCAGTGGCTATGGTCTGGATGGCGGGGTACGGCATTCGAAGGTGCTTCC
CCAGATTTGCAAAAGCCATACCAGCTGAATCATGGGGACTGTAAGGCCTGTCGTGAACAACATACTACCTGTGAT
CATACACGACCTCAGTGCTCTCATTGTTGGTCACAGCAGCTCTTGTGCTTCTATGTGGACCCGAAACGGAGGAAA
CAGAAAAATATTCGGAAGGCAACTTTCAGTGAAGTGGAAACGAGTTCCGGGTTGATCAAGGACACGACAGCGTGA
Gene >Pro_DTO012A7_2|g2413.t1
ATGAACGTTTTAGTAAAAGGAGAACATGAACACCGGTTAGAGCTCTCATGGTTATTCAAAGGTTGGATGAAGGCT
GACAGTACTACAGAGAACAGATCCCTCGTGATATGCCTACATACGAGCAGATGGAGAGTGGACTTTGCGGTCGCG
TCTCCCAGTGGCTATGGTCTGGATGGCGGGGTACGGCATTCGAAGGTGCTTCCCCAGATTTGCAAAAGCCATACC
AGCTGAATCATGGGGACTGTAAGGCCTGTCGTGAACAACATACTACCTGTGATCATACACGACCTCAGTGCTCTC
ATTGTTGGTCACAGCAGCTCTTGTGCTTCTATGTGGACCCGAAACGGAGGAAACAGAAAAATATTCGGAAGGCAA
CTTTCAGTGAAGTGGAAACGAGTTCCGGGTTGATCAAGGACACGACAGCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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