Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|987
Gene name
LocationContig_1360:91..1686
Strand-
Gene length (bp)1595
Transcript length (bp)1284
Coding sequence length (bp)1284
Protein length (aa) 428

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12999 PRKCSH-like Glucosidase II beta subunit-like 1.9E-13 12 76
PF13015 PRKCSH_1 Glucosidase II beta subunit-like protein 3.1E-09 325 404

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P0CT24|GLU2B_USTMA Glucosidase 2 subunit beta OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_12045 PE=3 SV=1 41 396 4.0E-18
sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gtb1 PE=1 SV=1 14 418 7.0E-18
sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2 25 123 2.0E-09
sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus GN=PRKCSH PE=2 SV=1 25 123 8.0E-09
sp|Q9FM96|PSL4_ARATH Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1 18 123 2.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P0CT24|GLU2B_USTMA Glucosidase 2 subunit beta OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_12045 PE=3 SV=1 41 396 4.0E-18
sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gtb1 PE=1 SV=1 14 418 7.0E-18
sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2 25 123 2.0E-09
sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus GN=PRKCSH PE=2 SV=1 25 123 8.0E-09
sp|Q9FM96|PSL4_ARATH Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1 18 123 2.0E-08
sp|Q04924|GLU2B_YEAST Glucosidase 2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GTB1 PE=1 SV=1 43 123 1.0E-07
sp|O08795|GLU2B_MOUSE Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1 25 123 1.0E-07
sp|Q5NBP9|GLU2B_ORYSJ Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica GN=Os01g0276800 PE=2 SV=1 16 123 2.0E-07
sp|A2WNF5|GLU2B_ORYSI Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1 16 123 2.0E-07
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|987
MQRRTCLALAGAVSVLTVAATTSLPRGVGPEFASHYRSDDFACIGDPSVKLARSRINDNSCDCADGSDEPGTAAC
AFLDALSPEQPLGSGRSTNTSRALPGFWCENKGHIGSYVPFQYVNDGLTADVERLEARKEDAKRKQAEAELADRS
RVVGGGGGGGKLGVLVGLARKRVDELRGALEGVRREGAVLRGQVDELRGIMSSLKAGYNPNFNDEGVKAAVKAFE
DFSAREGQDVSEQVLDADVDELLREDGAESGINWGEFEDQAEDTDILLSLEAYLPESLRKAIHNWTLDLRLWLVR
NGILADRPRTGAESQLVKAAREATEAAEREASEKTKELEDQRADLSRDYGPSDVLRALRGRSISIDSGEYTYELN
WLGTTLQKSKKGHGDTSMGEFAALEREVVDEQERDDGKSLGRGEDGCMAWVC*
Coding >Ophun1|987
ATGCAGCGACGAACTTGCCTGGCGCTCGCCGGCGCCGTGTCTGTCCTCACGGTTGCGGCTACGACGTCTCTCCCC
CGGGGCGTCGGCCCTGAATTCGCCTCCCACTACCGCTCCGATGACTTCGCCTGCATAGGCGACCCGTCTGTTAAG
CTTGCCCGCTCGCGCATCAACGATAACAGCTGCGATTGCGCCGATGGATCGGACGAGCCTGGAACGGCAGCCTGT
GCGTTCCTAGACGCGCTTTCGCCGGAGCAGCCGCTTGGTTCGGGGCGGAGCACCAACACGAGCAGGGCTCTTCCT
GGTTTCTGGTGTGAGAATAAGGGGCATATCGGCAGCTACGTTCCGTTCCAGTACGTTAATGACGGTTTGACGGCT
GATGTCGAGAGGCTTGAGGCCAGGAAGGAAGACGCCAAGAGGAAGCAGGCCGAGGCCGAGCTGGCGGACCGGAGC
AGGGTCGTCGGCGGTGGTGGCGGAGGGGGAAAGCTGGGCGTGTTGGTTGGCCTTGCGCGGAAGAGGGTTGACGAG
CTGCGCGGAGCTCTTGAGGGGGTGCGTCGGGAGGGAGCGGTGCTTCGGGGGCAGGTTGATGAGCTTCGGGGCATT
ATGTCATCGCTCAAGGCTGGTTATAACCCCAACTTTAACGACGAGGGTGTTAAGGCAGCTGTCAAGGCGTTCGAG
GACTTTTCGGCCAGGGAGGGGCAGGATGTTTCGGAGCAGGTTCTTGATGCTGATGTTGATGAGTTGCTGAGGGAG
GATGGGGCTGAGAGTGGGATTAACTGGGGGGAGTTTGAGGATCAGGCTGAGGATACTGATATCTTGTTGAGTCTC
GAAGCCTACCTCCCCGAATCCCTCCGCAAGGCAATCCACAACTGGACCCTCGATCTTCGACTCTGGCTCGTTCGA
AACGGCATCCTAGCCGACAGGCCAAGAACAGGCGCGGAATCGCAGCTCGTCAAGGCAGCGCGCGAGGCAACAGAG
GCAGCAGAGAGGGAAGCCTCCGAGAAGACCAAAGAACTGGAAGACCAACGCGCAGATCTGAGCAGAGACTACGGC
CCCTCGGACGTGCTGCGCGCTCTCCGCGGCAGAAGCATAAGCATCGACTCTGGCGAATACACGTACGAACTTAAC
TGGCTTGGTACCACGTTGCAAAAGTCGAAGAAGGGGCACGGCGATACGAGTATGGGCGAGTTTGCGGCCTTGGAG
CGCGAGGTTGTGGATGAGCAGGAGAGGGATGATGGGAAGAGTCTTGGAAGGGGAGAGGACGGATGTATGGCTTGG
GTGTGCTGA
Transcript >Ophun1|987
ATGCAGCGACGAACTTGCCTGGCGCTCGCCGGCGCCGTGTCTGTCCTCACGGTTGCGGCTACGACGTCTCTCCCC
CGGGGCGTCGGCCCTGAATTCGCCTCCCACTACCGCTCCGATGACTTCGCCTGCATAGGCGACCCGTCTGTTAAG
CTTGCCCGCTCGCGCATCAACGATAACAGCTGCGATTGCGCCGATGGATCGGACGAGCCTGGAACGGCAGCCTGT
GCGTTCCTAGACGCGCTTTCGCCGGAGCAGCCGCTTGGTTCGGGGCGGAGCACCAACACGAGCAGGGCTCTTCCT
GGTTTCTGGTGTGAGAATAAGGGGCATATCGGCAGCTACGTTCCGTTCCAGTACGTTAATGACGGTTTGACGGCT
GATGTCGAGAGGCTTGAGGCCAGGAAGGAAGACGCCAAGAGGAAGCAGGCCGAGGCCGAGCTGGCGGACCGGAGC
AGGGTCGTCGGCGGTGGTGGCGGAGGGGGAAAGCTGGGCGTGTTGGTTGGCCTTGCGCGGAAGAGGGTTGACGAG
CTGCGCGGAGCTCTTGAGGGGGTGCGTCGGGAGGGAGCGGTGCTTCGGGGGCAGGTTGATGAGCTTCGGGGCATT
ATGTCATCGCTCAAGGCTGGTTATAACCCCAACTTTAACGACGAGGGTGTTAAGGCAGCTGTCAAGGCGTTCGAG
GACTTTTCGGCCAGGGAGGGGCAGGATGTTTCGGAGCAGGTTCTTGATGCTGATGTTGATGAGTTGCTGAGGGAG
GATGGGGCTGAGAGTGGGATTAACTGGGGGGAGTTTGAGGATCAGGCTGAGGATACTGATATCTTGTTGAGTCTC
GAAGCCTACCTCCCCGAATCCCTCCGCAAGGCAATCCACAACTGGACCCTCGATCTTCGACTCTGGCTCGTTCGA
AACGGCATCCTAGCCGACAGGCCAAGAACAGGCGCGGAATCGCAGCTCGTCAAGGCAGCGCGCGAGGCAACAGAG
GCAGCAGAGAGGGAAGCCTCCGAGAAGACCAAAGAACTGGAAGACCAACGCGCAGATCTGAGCAGAGACTACGGC
CCCTCGGACGTGCTGCGCGCTCTCCGCGGCAGAAGCATAAGCATCGACTCTGGCGAATACACGTACGAACTTAAC
TGGCTTGGTACCACGTTGCAAAAGTCGAAGAAGGGGCACGGCGATACGAGTATGGGCGAGTTTGCGGCCTTGGAG
CGCGAGGTTGTGGATGAGCAGGAGAGGGATGATGGGAAGAGTCTTGGAAGGGGAGAGGACGGATGTATGGCTTGG
GTGTGCTGA
Gene >Ophun1|987
ATGCAGCGACGAACTTGCCTGGCGCTCGCCGGCGCCGTGTCTGTCCTCACGGTTGCGGCTACGACGTCTCTCCCC
CGGGGCGTCGGCCCTGAATTCGCCTCCCACTACCGCTCCGATGACTTCGCCTGCATAGGCGACCCGTCTGTTAAG
CTTGCCCGCTCGCGCATCAACGATAACAGCTGCGATTGCGCCGATGGATCGGACGAGCCTGGAACGGCAGCCTGT
GCGTTCCTAGACGCGCTTTCGCCGGAGCAGCCGCTTGGTTCGGGGCGGAGCACCAACACGAGCAGGGCTCTTCCT
GGTTTCTGGTGTGAGAATAAGGGGCATATCGGCAGCTACGTTCCGTTCCAGTACGTTAATGACGGTGTCTGCGAC
TACGAGCTCTGCTGTGATGGAAGTGAGGAGTTTGGGAGAAGGGCTACGTGTGAGAATCGGTGCGCGGACATTGGG
CGTGAACATCGACGGAAGGTTGAGGAGAGGGTGGCGGGGATGAAACGCGCGCTGAAGAAGAGGGAGGCCATGATT
TCCGAGGCGGTGCGACTTCGTCGTCAGGCTGAATCACGGCTCTCGCAGTTGACGGCTGATGTCGAGAGGCTTGAG
GCCAGGAAGGAAGACGCCAAGAGGAAGCAGGCCGAGGCCGAGCTGGCGGACCGGAGCAGGGTCGTCGGCGGTGGT
GGCGGAGGGGGAAAGCTGGGCGTGTTGGTTGGCCTTGCGCGGAAGAGGGTTGACGAGCTGCGCGGAGCTCTTGAG
GGGGTGCGTCGGGAGGGAGCGGTGCTTCGGGGGCAGGTTGATGAGCTTCGGGGCATTATGTCATCGCTCAAGGCT
GGTTATAACCCCAACTTTAACGACGAGGGTGTTAAGGCAGCTGTCAAGGCGTTCGAGGACTTTTCGGCCAGGGAG
GGGCAGGATGTTTCGGAGCAGGTTCTTGATGCTGATGTTGATGAGTTGCTGAGGGAGGATGGGGCTGAGAGTGGG
ATTAACTGGGGGGAGTTTGAGGATCAGGCTGAGGATACTGATATCTGTGAGTCTTTCGTCTTATTCTTGTTACTG
GGTTCTAACGGGAGACTAGTGTTGAGTCTCGAAGCCTACCTCCCCGAATCCCTCCGCAAGGCAATCCACAACTGG
ACCCTCGATCTTCGACTCTGGCTCGTTCGAAACGGCATCCTAGCCGACAGGCCAAGAACAGGCGCGGAATCGCAG
CTCGTCAAGGCAGCGCGCGAGGCAACAGAGGCAGCAGAGAGGGAAGCCTCCGAGAAGACCAAAGAACTGGAAGAC
CAACGCGCAGATCTGAGCAGAGACTACGGCCCCTCGGACGTGCTGCGCGCTCTCCGCGGCAGAAGCATAAGCATC
GACTCTGGCGAATACACGTACGAACTTAACTGGCTTGGTACCACGTTGCAAAAGTCGAAGAAGGGGCACGGCGAT
ACGAGTATGGGCGAGTTTGCGGCCTTGGAGCGCGAGGTTGTGGATGAGCAGGAGAGGGATGATGGGAAGAGTCTT
GGAAGGGGAGTGCGGATGGTGCTTAGGTATGAGGATGGGTTGGGGTGTTGGAATGGGCCGAAAAGGAGGACGGAT
GTATGGCTTGGGTGTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail