© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|913 |
| Gene name | |
| Location | Contig_1320:874..1732 |
| Strand | - |
| Gene length (bp) | 858 |
| Transcript length (bp) | 702 |
| Coding sequence length (bp) | 702 |
| Protein length (aa) | 234 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03227 | GILT | Gamma interferon inducible lysosomal thiol reductase (GILT) | 5.2E-19 | 53 | 150 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | Yes |
| GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|913 MNPRARPIMRILIFSVFVIIVFVASLSRRPPAWTRRFGSKSPLATTSKLVPLEAHIISKCPDTRDALRELILPVM QQVSDKVDFKLNYIGTPVGDDGIECKHGPDECMGNIVELCARELYPDPKTNLGFIYCLTKQYRDIPKQALVEDCA LEHRVDVRLLNECATRDDGAYGLHLLRESVKRSAEADATISCTIRLNNQVYCVHDGGKWIQCPQGPAVSDLVSAI NKLHGPSS* |
| Coding | >Ophun1|913 ATGAACCCGCGTGCCCGCCCCATCATGCGCATCCTCATCTTCTCCGTCTTCGTCATCATCGTCTTCGTCGCCAGT CTGTCCCGCCGTCCCCCGGCATGGACCCGTCGCTTCGGCTCCAAATCCCCCCTCGCCACCACCTCCAAGCTGGTC CCGCTCGAGGCACACATCATCAGCAAATGCCCAGACACCAGGGATGCCCTGCGAGAGCTCATCCTGCCCGTCATG CAGCAGGTCTCCGACAAGGTTGACTTTAAACTCAACTACATCGGGACTCCTGTCGGCGACGATGGCATCGAATGC AAGCACGGACCGGACGAATGCATGGGAAACATTGTCGAGCTCTGCGCACGAGAGCTCTACCCCGATCCCAAGACC AACCTCGGATTCATATACTGTCTGACGAAGCAGTACCGCGACATCCCCAAGCAAGCCCTCGTCGAAGACTGCGCT CTGGAGCACCGCGTCGACGTCCGGCTTCTCAACGAGTGCGCGACTCGCGACGATGGCGCCTACGGCCTCCATCTC TTGCGCGAGAGTGTCAAGCGCTCCGCCGAGGCCGACGCAACCATCAGCTGCACCATCCGCCTCAACAATCAAGTC TACTGCGTCCACGACGGCGGTAAATGGATCCAATGTCCCCAAGGCCCCGCCGTATCCGACCTCGTCTCCGCCATC AACAAGCTCCACGGCCCGTCATCCTAG |
| Transcript | >Ophun1|913 ATGAACCCGCGTGCCCGCCCCATCATGCGCATCCTCATCTTCTCCGTCTTCGTCATCATCGTCTTCGTCGCCAGT CTGTCCCGCCGTCCCCCGGCATGGACCCGTCGCTTCGGCTCCAAATCCCCCCTCGCCACCACCTCCAAGCTGGTC CCGCTCGAGGCACACATCATCAGCAAATGCCCAGACACCAGGGATGCCCTGCGAGAGCTCATCCTGCCCGTCATG CAGCAGGTCTCCGACAAGGTTGACTTTAAACTCAACTACATCGGGACTCCTGTCGGCGACGATGGCATCGAATGC AAGCACGGACCGGACGAATGCATGGGAAACATTGTCGAGCTCTGCGCACGAGAGCTCTACCCCGATCCCAAGACC AACCTCGGATTCATATACTGTCTGACGAAGCAGTACCGCGACATCCCCAAGCAAGCCCTCGTCGAAGACTGCGCT CTGGAGCACCGCGTCGACGTCCGGCTTCTCAACGAGTGCGCGACTCGCGACGATGGCGCCTACGGCCTCCATCTC TTGCGCGAGAGTGTCAAGCGCTCCGCCGAGGCCGACGCAACCATCAGCTGCACCATCCGCCTCAACAATCAAGTC TACTGCGTCCACGACGGCGGTAAATGGATCCAATGTCCCCAAGGCCCCGCCGTATCCGACCTCGTCTCCGCCATC AACAAGCTCCACGGCCCGTCATCCTAG |
| Gene | >Ophun1|913 ATGAACCCGCGTGCCCGCCCCATCATGCGCATCCTCATCTTCTCCGTCTTCGTCATCATCGTCTTCGTCGCCAGT CTGTCCCGCCGTCCCCCGGCATGGACCCGTCGCTTCGGCTCCAAATCCCCCCTCGCCACCACCTCCAAGCTGGTC CCGCTCGAGGCACACATCATCAGCAAATGCCCAGACACCAGGGTCCGCACATGATTCCCCCGATATATACCTTCG TCTCCCGCGCTGACGCCTTCCAGGATGCCCTGCGAGAGCTCATCCTGCCCGTCATGCAGCAGGTCTCCGACAAGG TTGACTTTAAACTCAACTACATCGGGACGTGAGGCTCAACCTTTTGGACCCGCCGCATGCTTCACGCTGACGTTA TGCCGCAGTCCTGTCGGCGACGATGGCATCGAATGCAAGCACGGACCGGACGAATGCATGGGAAACATTGTCGAG CTCTGCGCACGAGAGCTCTACCCCGATCCCAAGACCAACCTCGGATTCATATACTGTCTGACGAAGCAGTACCGC GACATCCCCAAGCAAGCCCTCGTCGAAGACTGCGCTCTGGAGCACCGCGTCGACGTCCGGCTTCTCAACGAGTGC GCGACTCGCGACGATGGCGCCTACGGCCTCCATCTCTTGCGCGAGAGTGTCAAGCGCTCCGCCGAGGTGAGCTTC CCAACACCAAGCACCGCTCAAAGCTGACAATCATAGGCCGACGCAACCATCAGCTGCACCATCCGCCTCAACAAT CAAGTCTACTGCGTCCACGACGGCGGTAAATGGATCCAATGTCCCCAAGGCCCCGCCGTATCCGACCTCGTCTCC GCCATCAACAAGCTCCACGGCCCGTCATCCTAG |