Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|906
Gene name
LocationContig_132:23717..25459
Strand-
Gene length (bp)1742
Transcript length (bp)1488
Coding sequence length (bp)1488
Protein length (aa) 496

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01490 Aa_trans Transmembrane amino acid transporter protein 4.1E-80 17 406

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P40074|AVT6_YEAST Vacuolar amino acid transporter 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT6 PE=1 SV=1 18 397 8.0E-88
sp|O74327|AVT5_SCHPO Vacuolar amino acid transporter 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=avt5 PE=3 SV=1 14 489 3.0E-79
sp|P38176|AVT5_YEAST Vacuolar amino acid transporter 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT5 PE=3 SV=2 22 397 9.0E-73
sp|P40501|AVT7_YEAST Vacuolar amino acid transporter 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT7 PE=1 SV=1 18 409 3.0E-68
sp|Q5SPB1|S38A2_DANRE Sodium-coupled neutral amino acid transporter 2 OS=Danio rerio GN=slc38a2 PE=3 SV=1 16 399 2.0E-19
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|P40074|AVT6_YEAST Vacuolar amino acid transporter 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT6 PE=1 SV=1 18 397 8.0E-88
sp|O74327|AVT5_SCHPO Vacuolar amino acid transporter 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=avt5 PE=3 SV=1 14 489 3.0E-79
sp|P38176|AVT5_YEAST Vacuolar amino acid transporter 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT5 PE=3 SV=2 22 397 9.0E-73
sp|P40501|AVT7_YEAST Vacuolar amino acid transporter 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT7 PE=1 SV=1 18 409 3.0E-68
sp|Q5SPB1|S38A2_DANRE Sodium-coupled neutral amino acid transporter 2 OS=Danio rerio GN=slc38a2 PE=3 SV=1 16 399 2.0E-19
sp|Q6JWR2|S38A7_RAT Putative sodium-coupled neutral amino acid transporter 7 OS=Rattus norvegicus GN=Slc38a7 PE=2 SV=1 5 318 1.0E-18
sp|Q8BWH0|S38A7_MOUSE Putative sodium-coupled neutral amino acid transporter 7 OS=Mus musculus GN=Slc38a7 PE=1 SV=1 16 318 4.0E-18
sp|Q5R9F5|S38A7_PONAB Putative sodium-coupled neutral amino acid transporter 7 OS=Pongo abelii GN=SLC38A7 PE=2 SV=1 3 318 5.0E-17
sp|Q9NVC3|S38A7_HUMAN Putative sodium-coupled neutral amino acid transporter 7 OS=Homo sapiens GN=SLC38A7 PE=1 SV=1 3 297 9.0E-17
sp|Q6DEL1|S38A7_DANRE Putative sodium-coupled neutral amino acid transporter 7 OS=Danio rerio GN=slc38a7 PE=2 SV=1 11 388 2.0E-16
sp|E9PT23|S38AA_RAT Putative sodium-coupled neutral amino acid transporter 10 OS=Rattus norvegicus GN=Slc38a10 PE=2 SV=2 24 392 2.0E-16
sp|A7E3U5|S38A7_BOVIN Putative sodium-coupled neutral amino acid transporter 7 OS=Bos taurus GN=SLC38A7 PE=2 SV=1 23 318 3.0E-16
sp|Q5I012|S38AA_MOUSE Putative sodium-coupled neutral amino acid transporter 10 OS=Mus musculus GN=Slc38a10 PE=1 SV=2 24 392 5.0E-16
sp|Q5XH90|S38A2_XENTR Sodium-coupled neutral amino acid transporter 2 OS=Xenopus tropicalis GN=slc38a2 PE=2 SV=1 16 399 3.0E-15
sp|D3Z813|S38AB_RAT Putative sodium-coupled neutral amino acid transporter 11 OS=Rattus norvegicus GN=Slc38a11 PE=2 SV=1 14 405 7.0E-15
sp|Q5RC98|S38AA_PONAB Putative sodium-coupled neutral amino acid transporter 10 OS=Pongo abelii GN=SLC38A10 PE=2 SV=1 24 393 8.0E-15
sp|Q9HBR0|S38AA_HUMAN Putative sodium-coupled neutral amino acid transporter 10 OS=Homo sapiens GN=SLC38A10 PE=1 SV=2 24 393 1.0E-14
sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1 1 404 1.0E-14
sp|Q9JHZ9|S38A3_RAT Sodium-coupled neutral amino acid transporter 3 OS=Rattus norvegicus GN=Slc38a3 PE=2 SV=1 16 398 3.0E-14
sp|Q96QD8|S38A2_HUMAN Sodium-coupled neutral amino acid transporter 2 OS=Homo sapiens GN=SLC38A2 PE=1 SV=2 6 397 3.0E-14
sp|Q8R1S9|S38A4_MOUSE Sodium-coupled neutral amino acid transporter 4 OS=Mus musculus GN=Slc38a4 PE=1 SV=1 1 405 3.0E-14
sp|A1YG32|S38A2_PANPA Sodium-coupled neutral amino acid transporter 2 OS=Pan paniscus GN=SLC38A2 PE=3 SV=1 6 397 3.0E-14
sp|Q5R443|S38A1_PONAB Sodium-coupled neutral amino acid transporter 1 OS=Pongo abelii GN=SLC38A1 PE=2 SV=1 16 397 4.0E-14
sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1 16 397 6.0E-14
sp|Q9EQ25|S38A4_RAT Sodium-coupled neutral amino acid transporter 4 OS=Rattus norvegicus GN=Slc38a4 PE=1 SV=1 11 405 8.0E-14
sp|Q6WWW3|S38A6_RAT Probable sodium-coupled neutral amino acid transporter 6 OS=Rattus norvegicus GN=Slc38a6 PE=2 SV=1 1 404 2.0E-13
sp|Q9DCP2|S38A3_MOUSE Sodium-coupled neutral amino acid transporter 3 OS=Mus musculus GN=Slc38a3 PE=1 SV=1 16 397 3.0E-13
sp|Q9JHE5|S38A2_RAT Sodium-coupled neutral amino acid transporter 2 OS=Rattus norvegicus GN=Slc38a2 PE=1 SV=1 6 397 3.0E-13
sp|Q9JM15|S38A1_RAT Sodium-coupled neutral amino acid transporter 1 OS=Rattus norvegicus GN=Slc38a1 PE=1 SV=1 16 397 3.0E-13
sp|Q99624|S38A3_HUMAN Sodium-coupled neutral amino acid transporter 3 OS=Homo sapiens GN=SLC38A3 PE=1 SV=1 16 398 4.0E-13
sp|Q8K2P7|S38A1_MOUSE Sodium-coupled neutral amino acid transporter 1 OS=Mus musculus GN=Slc38a1 PE=1 SV=1 16 306 5.0E-13
sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid transporter 6 OS=Homo sapiens GN=SLC38A6 PE=1 SV=2 23 404 1.0E-12
sp|G3UVW3|S38A6_MOUSE Probable sodium-coupled neutral amino acid transporter 6 OS=Mus musculus GN=Slc38a6 PE=2 SV=1 1 404 1.0E-12
sp|Q5F468|S38A2_CHICK Sodium-coupled neutral amino acid transporter 2 OS=Gallus gallus GN=SLC38A2 PE=2 SV=2 6 397 3.0E-12
sp|Q6DFE7|S38A7_XENLA Putative sodium-coupled neutral amino acid transporter 7 OS=Xenopus laevis GN=slc38a7 PE=2 SV=1 16 403 6.0E-12
sp|A2VE31|S38A2_BOVIN Sodium-coupled neutral amino acid transporter 2 OS=Bos taurus GN=SLC38A2 PE=2 SV=1 6 397 1.0E-11
sp|Q3USY0|S38AB_MOUSE Putative sodium-coupled neutral amino acid transporter 11 OS=Mus musculus GN=Slc38a11 PE=2 SV=2 14 405 1.0E-11
sp|Q5E9S9|S38A5_BOVIN Sodium-coupled neutral amino acid transporter 5 OS=Bos taurus GN=SLC38A5 PE=2 SV=1 16 397 3.0E-11
sp|Q3U1J0|S38A5_MOUSE Sodium-coupled neutral amino acid transporter 5 OS=Mus musculus GN=Slc38a5 PE=1 SV=1 16 397 3.0E-11
sp|Q6PCF9|S38AA_XENLA Putative sodium-coupled neutral amino acid transporter 10 OS=Xenopus laevis GN=slc38a10 PE=2 SV=1 24 393 6.0E-11
sp|A2VCW5|S38A5_RAT Sodium-coupled neutral amino acid transporter 5 OS=Rattus norvegicus GN=Slc38a5 PE=1 SV=1 3 393 1.0E-10
sp|Q8WUX1|S38A5_HUMAN Sodium-coupled neutral amino acid transporter 5 OS=Homo sapiens GN=SLC38A5 PE=1 SV=1 16 397 2.0E-10
sp|Q503G8|S38A6_DANRE Probable sodium-coupled neutral amino acid transporter 6 OS=Danio rerio GN=slc38a6 PE=2 SV=1 11 395 2.0E-09
sp|Q8CFE6|S38A2_MOUSE Sodium-coupled neutral amino acid transporter 2 OS=Mus musculus GN=Slc38a2 PE=1 SV=1 6 397 3.0E-09
sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1 22 388 7.0E-08
sp|Q8CH36|S36A4_MOUSE Proton-coupled amino acid transporter 4 OS=Mus musculus GN=Slc36a4 PE=2 SV=1 11 270 2.0E-07
sp|P39981|AVT2_YEAST Vacuolar amino acid transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT2 PE=2 SV=1 17 386 2.0E-07
sp|Q969I6|S38A4_HUMAN Sodium-coupled neutral amino acid transporter 4 OS=Homo sapiens GN=SLC38A4 PE=1 SV=1 1 184 4.0E-07
sp|Q5EA97|S38AB_BOVIN Putative sodium-coupled neutral amino acid transporter 11 OS=Bos taurus GN=SLC38A11 PE=2 SV=1 5 405 1.0E-06
sp|Q6YBV0|S36A4_HUMAN Proton-coupled amino acid transporter 4 OS=Homo sapiens GN=SLC36A4 PE=1 SV=1 22 273 1.0E-06
sp|P34579|UNC47_CAEEL Vesicular GABA transporter OS=Caenorhabditis elegans GN=unc-47 PE=1 SV=2 4 395 2.0E-06
sp|Q5RE87|S38A4_PONAB Sodium-coupled neutral amino acid transporter 4 OS=Pongo abelii GN=SLC38A4 PE=2 SV=1 11 184 3.0E-06
sp|Q28I47|S38A8_XENTR Putative sodium-coupled neutral amino acid transporter 8 OS=Xenopus tropicalis GN=slc38a8 PE=2 SV=1 9 270 7.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 46 68 22
3 95 117 22
4 137 159 22
5 166 188 22
6 199 221 22
7 234 256 22
8 266 288 22
9 345 364 19
10 369 391 22
11 472 494 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|906
MARTRRRGGKDGGHGGQASTPSSIVNLLNTIIGAGTLAMPSVLSHMGIMLGVVLILWSGITAAFGLYLQSRCARY
LDRGTSSFFALSQITYPNASVIFDLAIAVKCFGVAISYMIIIGDLMPGVMLGFDDAVADIPYLVDRHFWITAFML
LIIPLSFLRRLDSLKYTSLIGLVSIGYLIVLVIYHFAADAHADPRDIRVIQWAGPVETLSALPVVMFSIINEIKD
NSPASMVEVVASSIGSAACIYVLVAITGYITFGNFIVGNIISMYPTGVASTIGKAAIVLLVLFSIPLQIHPCRAS
LHAVLKWRPNRSGANAGRPGSPLLNASAVPRGDHGSSTPISDTRFALLTTAILTLAYMTALSVSSLDRVLAFVGS
TGSTSISFILPGLFYYKISDPESIHHQRLIKVDDDMDDEPSSDVEEAAGGILAQSTSSIRSGAGAMTGSQSRWRW
RRKWRWDLEHLDHQLTRKLALSLAAYGIVVMTVCLLMNIFFAVAH*
Coding >Ophun1|906
ATGGCGAGGACCCGAAGACGAGGCGGCAAAGACGGCGGCCATGGCGGTCAGGCTTCGACGCCCAGCAGCATCGTC
AACCTGCTGAATACGATCATTGGCGCTGGCACTCTGGCTATGCCCTCTGTTCTGTCTCATATGGGCATCATGCTC
GGCGTCGTCCTCATTCTCTGGTCGGGCATCACGGCCGCCTTCGGCCTCTACCTGCAGTCCCGCTGCGCCCGCTAT
CTCGACCGTGGCACATCGTCCTTTTTCGCCTTGTCGCAAATCACATACCCCAATGCCTCGGTAATCTTCGATCTG
GCAATCGCCGTCAAGTGCTTTGGTGTCGCCATCTCCTACATGATCATCATTGGCGATCTCATGCCTGGCGTCATG
CTCGGCTTTGACGATGCCGTCGCCGACATTCCATATCTGGTTGACAGGCATTTCTGGATCACGGCTTTTATGCTC
CTCATCATTCCCTTGAGCTTCTTGCGCAGGCTCGACTCGCTCAAGTATACCAGTCTCATCGGCCTGGTCTCCATC
GGCTATCTCATTGTCCTCGTCATTTATCACTTCGCCGCCGACGCCCACGCCGACCCGCGCGATATTCGAGTCATC
CAATGGGCTGGGCCGGTCGAGACGCTGAGCGCGCTTCCCGTCGTCATGTTCTCCATCATCAACGAGATCAAGGAC
AACTCTCCGGCGAGCATGGTCGAAGTGGTAGCCTCGAGCATCGGATCCGCCGCGTGCATCTACGTTCTCGTAGCC
ATCACGGGCTACATTACGTTTGGAAACTTTATCGTCGGCAACATCATCTCCATGTATCCCACGGGCGTCGCTTCC
ACCATTGGCAAGGCTGCCATCGTCCTCCTCGTCCTCTTCTCCATTCCGCTGCAGATCCACCCCTGCCGTGCCTCT
CTGCATGCCGTCCTCAAGTGGCGTCCCAACAGATCAGGCGCCAATGCCGGCCGGCCAGGCTCTCCGCTGCTCAAT
GCGTCGGCCGTACCGCGCGGCGACCACGGCAGCAGCACACCAATCTCGGACACGCGATTCGCCCTCCTCACCACG
GCCATCCTCACGCTGGCCTACATGACGGCGCTGTCCGTCAGCAGCCTGGACCGGGTCCTCGCTTTCGTCGGCAGC
ACGGGCTCAACATCCATCAGCTTTATCCTACCGGGCCTGTTCTACTACAAGATCAGCGACCCGGAGAGCATCCAC
CACCAGCGTCTGATCAAGGTGGACGACGATATGGACGACGAGCCCTCATCCGACGTCGAGGAGGCCGCCGGCGGA
ATTCTGGCACAGAGCACGTCTAGCATACGCAGCGGTGCCGGCGCCATGACCGGCTCGCAGTCGCGCTGGCGATGG
CGACGGAAGTGGCGATGGGATCTAGAACACCTCGATCACCAGCTGACAAGGAAGCTGGCGCTCTCGCTAGCAGCC
TACGGCATCGTCGTCATGACCGTCTGCCTGCTAATGAATATCTTCTTTGCGGTCGCTCATTAG
Transcript >Ophun1|906
ATGGCGAGGACCCGAAGACGAGGCGGCAAAGACGGCGGCCATGGCGGTCAGGCTTCGACGCCCAGCAGCATCGTC
AACCTGCTGAATACGATCATTGGCGCTGGCACTCTGGCTATGCCCTCTGTTCTGTCTCATATGGGCATCATGCTC
GGCGTCGTCCTCATTCTCTGGTCGGGCATCACGGCCGCCTTCGGCCTCTACCTGCAGTCCCGCTGCGCCCGCTAT
CTCGACCGTGGCACATCGTCCTTTTTCGCCTTGTCGCAAATCACATACCCCAATGCCTCGGTAATCTTCGATCTG
GCAATCGCCGTCAAGTGCTTTGGTGTCGCCATCTCCTACATGATCATCATTGGCGATCTCATGCCTGGCGTCATG
CTCGGCTTTGACGATGCCGTCGCCGACATTCCATATCTGGTTGACAGGCATTTCTGGATCACGGCTTTTATGCTC
CTCATCATTCCCTTGAGCTTCTTGCGCAGGCTCGACTCGCTCAAGTATACCAGTCTCATCGGCCTGGTCTCCATC
GGCTATCTCATTGTCCTCGTCATTTATCACTTCGCCGCCGACGCCCACGCCGACCCGCGCGATATTCGAGTCATC
CAATGGGCTGGGCCGGTCGAGACGCTGAGCGCGCTTCCCGTCGTCATGTTCTCCATCATCAACGAGATCAAGGAC
AACTCTCCGGCGAGCATGGTCGAAGTGGTAGCCTCGAGCATCGGATCCGCCGCGTGCATCTACGTTCTCGTAGCC
ATCACGGGCTACATTACGTTTGGAAACTTTATCGTCGGCAACATCATCTCCATGTATCCCACGGGCGTCGCTTCC
ACCATTGGCAAGGCTGCCATCGTCCTCCTCGTCCTCTTCTCCATTCCGCTGCAGATCCACCCCTGCCGTGCCTCT
CTGCATGCCGTCCTCAAGTGGCGTCCCAACAGATCAGGCGCCAATGCCGGCCGGCCAGGCTCTCCGCTGCTCAAT
GCGTCGGCCGTACCGCGCGGCGACCACGGCAGCAGCACACCAATCTCGGACACGCGATTCGCCCTCCTCACCACG
GCCATCCTCACGCTGGCCTACATGACGGCGCTGTCCGTCAGCAGCCTGGACCGGGTCCTCGCTTTCGTCGGCAGC
ACGGGCTCAACATCCATCAGCTTTATCCTACCGGGCCTGTTCTACTACAAGATCAGCGACCCGGAGAGCATCCAC
CACCAGCGTCTGATCAAGGTGGACGACGATATGGACGACGAGCCCTCATCCGACGTCGAGGAGGCCGCCGGCGGA
ATTCTGGCACAGAGCACGTCTAGCATACGCAGCGGTGCCGGCGCCATGACCGGCTCGCAGTCGCGCTGGCGATGG
CGACGGAAGTGGCGATGGGATCTAGAACACCTCGATCACCAGCTGACAAGGAAGCTGGCGCTCTCGCTAGCAGCC
TACGGCATCGTCGTCATGACCGTCTGCCTGCTAATGAATATCTTCTTTGCGGTCGCTCATTAG
Gene >Ophun1|906
ATGGCGAGGTGCGTCTCTGGCGCTGCTTCTCGAGGGGCCGACTGATGGGCGCTGACGTCCATTTTCAAGGACCCG
AAGACGAGGCGGCAAAGACGGCGGCCATGGCGGTCAGGCTTCGACGCCCAGCAGCATCGTCAACCTGCTGAATAC
GAGTTCGCGCCCATCCCCTCTCCGACTGAGCTGGCTGGCTGACGGCTAGACAGTCATTGGCGCTGGCACTCTGGC
TATGCCCTCTGTTCTGTCTCATATGGGCATCATGCTCGGCGTCGTCCTCATTCTCTGGTCGGGCATCACGGCCGC
CTTCGGCCTCTACCTGCAGTCCCGCTGCGCCCGCTATCTCGACCGTGGCACATCGTCCTTTTTCGCCTTGTCGCA
AATCACATACCCCAATGCCTCGGTAATCTTCGATCTGGCAATCGCCGTCAAGTGCTTTGGTGTCGCCATCTCCTA
CATGATCATCATTGGCGATCTCATGCCTGGCGTCATGCTCGGCTTTGACGATGCCGTCGCCGACATTCCATATCT
GGTTGACAGGCATTTCTGGATCACGGCTTTTATGCTCCTCATCATTCCCTTGAGCTTCTTGCGCAGGCTCGACTC
GCTCAAGTATACCAGTCTCATCGGCCTGGTCTCCATCGGCTATCTCATTGTCCTCGTCATTTATCACTTCGCCGC
CGACGCCCACGCCGACCCGCGCGATATTCGAGTCATCCAATGGGCTGGGCCGGTCGAGACGCTGAGCGCGCTTCC
CGTCGTCGTCTTTGCCTATACGTGCCACCAGAATGCGAGTCGGCCCCTGCCCCTGACCCCCCCGAAGAGACGTAT
TTAGCTGATGCCGGGAGCAGATGTTCTCCATCATCAACGAGATCAAGGACAACTCTCCGGCGAGCATGGTCGAAG
TGGTAGCCTCGAGCATCGGATCCGCCGCGTGCATCTACGTTCTCGTAGCCATCACGGGCTACATTACGTTTGGAA
ACTTTATCGTCGGCAACATCATCTCCATGTGTAGGCAGCAGAAACCCCTTATGGCCGTCGCGCGCATGACCTGAC
AGAGTACAGATCCCACGGGCGTCGCTTCCACCATTGGCAAGGCTGCCATCGTCCTCCTCGTCCTCTTCTCCATTC
CGCTGCAGATCCACCCCTGCCGTGCCTCTCTGCATGCCGTCCTCAAGTGGCGTCCCAACAGATCAGGCGCCAATG
CCGGCCGGCCAGGCTCTCCGCTGCTCAATGCGTCGGCCGTACCGCGCGGCGACCACGGCAGCAGCACACCAATCT
CGGACACGCGATTCGCCCTCCTCACCACGGCCATCCTCACGCTGGCCTACATGACGGCGCTGTCCGTCAGCAGCC
TGGACCGGGTCCTCGCTTTCGTCGGCAGCACGGGCTCAACATCCATCAGCTTTATCCTACCGGGCCTGTTCTACT
ACAAGATCAGCGACCCGGAGAGCATCCACCACCAGCGTCTGATCAAGGTGGACGACGATATGGACGACGAGCCCT
CATCCGACGTCGAGGAGGCCGCCGGCGGAATTCTGGCACAGAGCACGTCTAGCATACGCAGCGGTGCCGGCGCCA
TGACCGGCTCGCAGTCGCGCTGGCGATGGCGACGGAAGTGGCGATGGGATCTAGAACACCTCGATCACCAGCTGA
CAAGGAAGCTGGCGCTCTCGCTAGCAGCCTACGGCATCGTCGTCATGACCGTCTGCCTGCTAATGAATATCTTCT
TTGCGGTCGCTCATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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