Protein ID | Ophun1|901 |
Gene name | |
Location | Contig_132:15559..16684 |
Strand | + |
Gene length (bp) | 1125 |
Transcript length (bp) | 1125 |
Coding sequence length (bp) | 1125 |
Protein length (aa) | 375 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01753 | zf-MYND | MYND finger | 3.8E-08 | 21 | 59 |
Orthofinder run ID | 4 |
Orthogroup | 6735 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|901 MSLISDIKDIDAIDGLRPRACERCQRRDGILLRCSSCKAVYYCGRDCQVAVRLQHKKPCKAISTALRHFDVEYKL LRDKPGDLFLPERVFETCVGRFWGIFETRSYMRARFGVVDALLRNYGRVGGSADVVQTALGHLLEMMTLCRSDNM GLRDLIPPLFIRLGRDQESYDFIKWYIHAQEDDTYDWGDMDLPFLDVKNADMLEAPPKKWFVGEPWLQLTHAVSL LLIKLRIWLDLRAIRNLSWAVGGLLPQELMDRIAVEIAGRIVLHRPDLRLTDAEQMATLAKTLKSDIWDLYLAVD KYCEYFWDILLEDPDEAIESTPQLYSPGSEQEALLMGRFSIASWYETPGAVEVLRQVRDADIVGSFGAKTFPAI* |
Coding | >Ophun1|901 ATGTCGCTCATCAGTGACATCAAAGACATTGACGCTATTGACGGCCTCAGACCTCGTGCCTGCGAGCGCTGCCAA CGTCGAGACGGAATCCTGCTACGCTGTAGCTCCTGCAAAGCCGTCTACTATTGCGGACGAGACTGCCAGGTAGCC GTTCGTCTGCAGCACAAGAAGCCGTGCAAAGCCATCTCAACCGCGTTGCGCCACTTCGATGTCGAATATAAATTG TTGCGAGACAAGCCCGGCGACCTGTTCCTCCCCGAGCGTGTCTTTGAGACGTGCGTCGGTCGCTTCTGGGGCATC TTCGAAACGCGCTCCTACATGCGAGCCCGCTTCGGCGTCGTCGATGCCCTTCTGCGGAACTATGGCAGGGTTGGC GGATCGGCAGACGTGGTGCAGACGGCGCTAGGCCACCTGCTGGAGATGATGACGTTGTGCCGCTCGGACAATATG GGCCTCCGCGATCTCATCCCCCCCCTCTTCATTCGTCTGGGCAGGGATCAAGAGTCGTACGACTTTATCAAGTGG TACATCCACGCGCAAGAGGACGACACCTACGATTGGGGAGACATGGACCTCCCGTTTCTCGACGTCAAAAACGCA GACATGCTGGAAGCGCCTCCCAAGAAATGGTTCGTCGGGGAACCGTGGCTGCAACTGACTCACGCCGTTTCCCTG CTCCTGATCAAATTGCGCATCTGGCTCGATCTGCGAGCCATACGAAACCTATCTTGGGCAGTCGGTGGCCTTCTT CCACAGGAACTCATGGACCGCATCGCCGTCGAAATCGCCGGCCGCATCGTCCTCCACAGGCCCGACCTCAGACTG ACGGATGCGGAGCAGATGGCTACCTTGGCCAAGACGCTCAAAAGCGATATTTGGGACTTGTACCTGGCCGTCGAT AAATACTGCGAGTACTTTTGGGATATTTTGCTTGAAGACCCGGACGAGGCTATAGAGTCCACGCCGCAGTTATAC TCGCCTGGGTCGGAGCAAGAAGCGCTGCTGATGGGGAGATTCAGCATTGCTTCCTGGTACGAGACGCCGGGGGCG GTGGAGGTGCTGAGACAAGTGAGGGATGCGGACATTGTGGGCAGTTTCGGGGCGAAGACTTTTCCTGCGATCTAG |
Transcript | >Ophun1|901 ATGTCGCTCATCAGTGACATCAAAGACATTGACGCTATTGACGGCCTCAGACCTCGTGCCTGCGAGCGCTGCCAA CGTCGAGACGGAATCCTGCTACGCTGTAGCTCCTGCAAAGCCGTCTACTATTGCGGACGAGACTGCCAGGTAGCC GTTCGTCTGCAGCACAAGAAGCCGTGCAAAGCCATCTCAACCGCGTTGCGCCACTTCGATGTCGAATATAAATTG TTGCGAGACAAGCCCGGCGACCTGTTCCTCCCCGAGCGTGTCTTTGAGACGTGCGTCGGTCGCTTCTGGGGCATC TTCGAAACGCGCTCCTACATGCGAGCCCGCTTCGGCGTCGTCGATGCCCTTCTGCGGAACTATGGCAGGGTTGGC GGATCGGCAGACGTGGTGCAGACGGCGCTAGGCCACCTGCTGGAGATGATGACGTTGTGCCGCTCGGACAATATG GGCCTCCGCGATCTCATCCCCCCCCTCTTCATTCGTCTGGGCAGGGATCAAGAGTCGTACGACTTTATCAAGTGG TACATCCACGCGCAAGAGGACGACACCTACGATTGGGGAGACATGGACCTCCCGTTTCTCGACGTCAAAAACGCA GACATGCTGGAAGCGCCTCCCAAGAAATGGTTCGTCGGGGAACCGTGGCTGCAACTGACTCACGCCGTTTCCCTG CTCCTGATCAAATTGCGCATCTGGCTCGATCTGCGAGCCATACGAAACCTATCTTGGGCAGTCGGTGGCCTTCTT CCACAGGAACTCATGGACCGCATCGCCGTCGAAATCGCCGGCCGCATCGTCCTCCACAGGCCCGACCTCAGACTG ACGGATGCGGAGCAGATGGCTACCTTGGCCAAGACGCTCAAAAGCGATATTTGGGACTTGTACCTGGCCGTCGAT AAATACTGCGAGTACTTTTGGGATATTTTGCTTGAAGACCCGGACGAGGCTATAGAGTCCACGCCGCAGTTATAC TCGCCTGGGTCGGAGCAAGAAGCGCTGCTGATGGGGAGATTCAGCATTGCTTCCTGGTACGAGACGCCGGGGGCG GTGGAGGTGCTGAGACAAGTGAGGGATGCGGACATTGTGGGCAGTTTCGGGGCGAAGACTTTTCCTGCGATCTAG |
Gene | >Ophun1|901 ATGTCGCTCATCAGTGACATCAAAGACATTGACGCTATTGACGGCCTCAGACCTCGTGCCTGCGAGCGCTGCCAA CGTCGAGACGGAATCCTGCTACGCTGTAGCTCCTGCAAAGCCGTCTACTATTGCGGACGAGACTGCCAGGTAGCC GTTCGTCTGCAGCACAAGAAGCCGTGCAAAGCCATCTCAACCGCGTTGCGCCACTTCGATGTCGAATATAAATTG TTGCGAGACAAGCCCGGCGACCTGTTCCTCCCCGAGCGTGTCTTTGAGACGTGCGTCGGTCGCTTCTGGGGCATC TTCGAAACGCGCTCCTACATGCGAGCCCGCTTCGGCGTCGTCGATGCCCTTCTGCGGAACTATGGCAGGGTTGGC GGATCGGCAGACGTGGTGCAGACGGCGCTAGGCCACCTGCTGGAGATGATGACGTTGTGCCGCTCGGACAATATG GGCCTCCGCGATCTCATCCCCCCCCTCTTCATTCGTCTGGGCAGGGATCAAGAGTCGTACGACTTTATCAAGTGG TACATCCACGCGCAAGAGGACGACACCTACGATTGGGGAGACATGGACCTCCCGTTTCTCGACGTCAAAAACGCA GACATGCTGGAAGCGCCTCCCAAGAAATGGTTCGTCGGGGAACCGTGGCTGCAACTGACTCACGCCGTTTCCCTG CTCCTGATCAAATTGCGCATCTGGCTCGATCTGCGAGCCATACGAAACCTATCTTGGGCAGTCGGTGGCCTTCTT CCACAGGAACTCATGGACCGCATCGCCGTCGAAATCGCCGGCCGCATCGTCCTCCACAGGCCCGACCTCAGACTG ACGGATGCGGAGCAGATGGCTACCTTGGCCAAGACGCTCAAAAGCGATATTTGGGACTTGTACCTGGCCGTCGAT AAATACTGCGAGTACTTTTGGGATATTTTGCTTGAAGACCCGGACGAGGCTATAGAGTCCACGCCGCAGTTATAC TCGCCTGGGTCGGAGCAAGAAGCGCTGCTGATGGGGAGATTCAGCATTGCTTCCTGGTACGAGACGCCGGGGGCG GTGGAGGTGCTGAGACAAGTGAGGGATGCGGACATTGTGGGCAGTTTCGGGGCGAAGACTTTTCCTGCGATCTAG |