Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|895
Gene name
LocationContig_1313:705..2926
Strand+
Gene length (bp)2221
Transcript length (bp)2097
Coding sequence length (bp)2097
Protein length (aa) 699

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17681 GCP_N_terminal Gamma tubulin complex component N-terminal 1.1E-27 2 286
PF04130 GCP_C_terminal Gamma tubulin complex component C-terminal 7.2E-22 297 671

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9UGJ1|GCP4_HUMAN Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1 SV=1 1 535 9.0E-12
sp|Q9SC88|GCP4_MEDTR Gamma-tubulin complex component 4 homolog OS=Medicago truncatula GN=85P PE=2 SV=1 63 535 2.0E-09

GO

GO Term Description Terminal node
GO:0043015 gamma-tubulin binding Yes
GO:0008092 cytoskeletal protein binding No
GO:0003674 molecular_function No
GO:0005515 protein binding No
GO:0015631 tubulin binding No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4644
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3500
Ophiocordyceps australis map64 (Brazil) OphauB2|2564
Ophiocordyceps camponoti-floridani Ophcf2|06368
Ophiocordyceps camponoti-rufipedis Ophun1|895 (this protein)
Ophiocordyceps kimflemingae Ophio5|7518
Ophiocordyceps subramaniannii Hirsu2|9764

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|895
MLHEMLLALSGHPSPLLRNPGPEADALAGITPPERHLLASVAHLSHVHSTLVTLTERIYSSHPSAICRAAAAAIQ
SYHLTAFQQKVLHVEQAILSHDPDFVGAYSIVPLTAVVGEFQQWTKRMECLLETAQFILAKRDASAASLGVDLID
RLRTQVQSGYRDVSETARSLLSASETAWLKQVSAWILYGRLPSFGAADFFVQASGEEFVFLSDCVPSFVTPATAS
SMLYIGTTLRRIREMGESWAGLDHVSSKKLQQLTRLKSPFSSVEFSRAVGSIRLSLSQESLSKLLPLAKVVEMLH
LLRDFFLLGRGEFALALVQEADGEIRDRWRRWTDDGVEKVAVSEGQIVAVLDRTWAVLAAMQGQHGDEDEQLDLA
RDLLRLTSKTPAALGSGPGLSADAAEAIEALPFADLLLSVPTTLRLDLPSPLDMVISQSDMHIYGQINAYLLSLR
RAHIRLTDLWKMTSLRRHHPAPTGAEDQALSLRRRWSARTAALRGSWTTASAAVFFLAETEAYLQADVVGGMWES
LTSWLEGRRDDGGDGQNSDDDADLFLLEETCTSNGDQTPIHDPQTLARAHSVYLGALARRLLLTEPTFTQPLYAL
LKHMDRLASLMRRLHAVFIAADLEADAGVVDASLDLAQEEAHLTAQLGTTETQVRKGIEHVVNQLRSLESSVEEE
EGVEGDDVDDVLPGRKLDGWDLV*
Coding >Ophun1|895
ATGCTCCATGAGATGCTCCTCGCCCTGTCGGGACACCCGTCTCCCCTCCTACGAAACCCCGGTCCCGAAGCAGAT
GCTCTAGCCGGCATAACACCTCCCGAGCGCCATCTGCTCGCCTCCGTTGCCCATCTCAGCCACGTCCACTCGACG
CTCGTCACCCTCACCGAACGCATCTACTCGTCTCACCCTTCGGCCATCTGTCGCGCTGCCGCCGCCGCCATCCAG
TCGTATCACCTAACGGCCTTTCAGCAAAAGGTTCTGCATGTCGAGCAAGCCATCCTCAGCCATGACCCGGACTTT
GTCGGCGCCTACAGCATCGTGCCACTCACGGCCGTCGTGGGCGAGTTTCAGCAGTGGACGAAAAGAATGGAGTGC
TTGTTGGAGACGGCGCAGTTCATACTGGCCAAGCGTGACGCTTCTGCTGCGAGCCTAGGTGTCGACTTGATCGAT
CGTCTGAGGACTCAGGTTCAGAGCGGATATCGGGACGTCTCCGAGACGGCTCGGAGCCTGTTATCCGCTTCGGAA
ACGGCATGGCTGAAGCAAGTCTCGGCTTGGATACTCTACGGCCGGCTTCCGAGCTTTGGCGCCGCCGACTTCTTC
GTTCAGGCTTCCGGCGAGGAGTTTGTATTCTTATCAGACTGTGTGCCGTCGTTTGTCACGCCCGCTACGGCCTCG
TCCATGCTCTACATCGGCACGACGCTTCGCCGCATCCGTGAGATGGGAGAGTCTTGGGCCGGGCTGGACCACGTC
TCGTCCAAGAAGCTGCAGCAACTGACACGTCTCAAATCCCCGTTCTCTTCCGTCGAATTCTCCCGAGCCGTCGGT
TCCATCCGCCTCTCTCTCTCTCAAGAGTCGTTGTCGAAGCTGCTGCCCTTGGCCAAGGTGGTTGAGATGCTGCAT
CTCTTGCGGGACTTTTTCCTCCTCGGGCGAGGCGAGTTCGCTCTGGCTCTCGTGCAAGAAGCCGACGGCGAGATA
CGCGACAGATGGCGCAGATGGACCGACGACGGCGTCGAAAAGGTGGCCGTCAGCGAGGGACAGATCGTCGCCGTA
CTCGACAGGACCTGGGCCGTGCTGGCAGCCATGCAAGGTCAGCACGGCGACGAGGACGAACAGCTGGATCTCGCC
CGCGATCTGCTCCGACTGACGAGCAAGACTCCGGCTGCCCTCGGCTCCGGACCCGGTCTCAGCGCCGACGCCGCC
GAGGCCATCGAGGCGCTGCCCTTTGCGGACCTGCTTCTCTCGGTTCCGACGACGCTCCGTCTCGACCTCCCCTCG
CCGCTCGACATGGTCATTTCGCAGTCCGACATGCACATCTACGGCCAGATCAACGCGTATCTGCTGTCTCTGCGT
CGCGCCCACATCCGGCTGACGGATCTATGGAAGATGACGTCGCTCCGACGTCACCATCCGGCCCCGACGGGCGCA
GAAGACCAGGCCCTCTCTCTGCGAAGGCGGTGGTCGGCGAGGACGGCGGCTCTTCGCGGATCGTGGACGACGGCC
AGCGCTGCTGTCTTCTTCCTCGCAGAGACGGAGGCTTACCTTCAGGCTGACGTTGTGGGCGGCATGTGGGAGTCG
TTGACCTCGTGGCTCGAGGGTCGACGGGACGATGGGGGAGACGGTCAGAATAGTGACGATGACGCAGATCTCTTT
CTGCTGGAAGAGACATGTACCTCGAATGGAGACCAGACACCTATTCACGACCCCCAGACGCTGGCCAGGGCTCAC
TCGGTCTACCTCGGCGCCCTCGCCAGACGGCTCCTCCTCACCGAGCCGACCTTCACACAGCCACTATACGCGCTA
CTCAAGCACATGGACCGTCTGGCCTCCCTCATGCGACGCCTCCACGCCGTCTTCATCGCAGCCGACCTCGAAGCC
GACGCCGGCGTCGTCGACGCGTCCCTAGATCTAGCCCAGGAAGAAGCCCACCTCACAGCCCAGCTAGGAACTACG
GAAACGCAGGTCAGGAAGGGCATCGAGCATGTTGTGAACCAGCTCCGCAGTCTCGAAAGCAGCGTCGAGGAGGAA
GAAGGTGTTGAAGGTGACGACGTGGACGACGTGCTTCCAGGTCGCAAGCTGGATGGGTGGGATTTGGTGTGA
Transcript >Ophun1|895
ATGCTCCATGAGATGCTCCTCGCCCTGTCGGGACACCCGTCTCCCCTCCTACGAAACCCCGGTCCCGAAGCAGAT
GCTCTAGCCGGCATAACACCTCCCGAGCGCCATCTGCTCGCCTCCGTTGCCCATCTCAGCCACGTCCACTCGACG
CTCGTCACCCTCACCGAACGCATCTACTCGTCTCACCCTTCGGCCATCTGTCGCGCTGCCGCCGCCGCCATCCAG
TCGTATCACCTAACGGCCTTTCAGCAAAAGGTTCTGCATGTCGAGCAAGCCATCCTCAGCCATGACCCGGACTTT
GTCGGCGCCTACAGCATCGTGCCACTCACGGCCGTCGTGGGCGAGTTTCAGCAGTGGACGAAAAGAATGGAGTGC
TTGTTGGAGACGGCGCAGTTCATACTGGCCAAGCGTGACGCTTCTGCTGCGAGCCTAGGTGTCGACTTGATCGAT
CGTCTGAGGACTCAGGTTCAGAGCGGATATCGGGACGTCTCCGAGACGGCTCGGAGCCTGTTATCCGCTTCGGAA
ACGGCATGGCTGAAGCAAGTCTCGGCTTGGATACTCTACGGCCGGCTTCCGAGCTTTGGCGCCGCCGACTTCTTC
GTTCAGGCTTCCGGCGAGGAGTTTGTATTCTTATCAGACTGTGTGCCGTCGTTTGTCACGCCCGCTACGGCCTCG
TCCATGCTCTACATCGGCACGACGCTTCGCCGCATCCGTGAGATGGGAGAGTCTTGGGCCGGGCTGGACCACGTC
TCGTCCAAGAAGCTGCAGCAACTGACACGTCTCAAATCCCCGTTCTCTTCCGTCGAATTCTCCCGAGCCGTCGGT
TCCATCCGCCTCTCTCTCTCTCAAGAGTCGTTGTCGAAGCTGCTGCCCTTGGCCAAGGTGGTTGAGATGCTGCAT
CTCTTGCGGGACTTTTTCCTCCTCGGGCGAGGCGAGTTCGCTCTGGCTCTCGTGCAAGAAGCCGACGGCGAGATA
CGCGACAGATGGCGCAGATGGACCGACGACGGCGTCGAAAAGGTGGCCGTCAGCGAGGGACAGATCGTCGCCGTA
CTCGACAGGACCTGGGCCGTGCTGGCAGCCATGCAAGGTCAGCACGGCGACGAGGACGAACAGCTGGATCTCGCC
CGCGATCTGCTCCGACTGACGAGCAAGACTCCGGCTGCCCTCGGCTCCGGACCCGGTCTCAGCGCCGACGCCGCC
GAGGCCATCGAGGCGCTGCCCTTTGCGGACCTGCTTCTCTCGGTTCCGACGACGCTCCGTCTCGACCTCCCCTCG
CCGCTCGACATGGTCATTTCGCAGTCCGACATGCACATCTACGGCCAGATCAACGCGTATCTGCTGTCTCTGCGT
CGCGCCCACATCCGGCTGACGGATCTATGGAAGATGACGTCGCTCCGACGTCACCATCCGGCCCCGACGGGCGCA
GAAGACCAGGCCCTCTCTCTGCGAAGGCGGTGGTCGGCGAGGACGGCGGCTCTTCGCGGATCGTGGACGACGGCC
AGCGCTGCTGTCTTCTTCCTCGCAGAGACGGAGGCTTACCTTCAGGCTGACGTTGTGGGCGGCATGTGGGAGTCG
TTGACCTCGTGGCTCGAGGGTCGACGGGACGATGGGGGAGACGGTCAGAATAGTGACGATGACGCAGATCTCTTT
CTGCTGGAAGAGACATGTACCTCGAATGGAGACCAGACACCTATTCACGACCCCCAGACGCTGGCCAGGGCTCAC
TCGGTCTACCTCGGCGCCCTCGCCAGACGGCTCCTCCTCACCGAGCCGACCTTCACACAGCCACTATACGCGCTA
CTCAAGCACATGGACCGTCTGGCCTCCCTCATGCGACGCCTCCACGCCGTCTTCATCGCAGCCGACCTCGAAGCC
GACGCCGGCGTCGTCGACGCGTCCCTAGATCTAGCCCAGGAAGAAGCCCACCTCACAGCCCAGCTAGGAACTACG
GAAACGCAGGTCAGGAAGGGCATCGAGCATGTTGTGAACCAGCTCCGCAGTCTCGAAAGCAGCGTCGAGGAGGAA
GAAGGTGTTGAAGGTGACGACGTGGACGACGTGCTTCCAGGTCGCAAGCTGGATGGGTGGGATTTGGTGTGA
Gene >Ophun1|895
ATGCTCCATGAGATGCTCCTCGCCCTGTCGGGACACCCGTCTCCCCTCCTACGAAACCCCGGTCCCGAAGCAGAT
GCTCTAGCCGGCATAACACCTCCCGAGCGCCATCTGCTCGCCTCCGTTGCCCATCTCAGCCACGTCCACTCGACG
CTCGTCACCCTCACCGAACGCATCTACTCGTCTCACCCTTCGGCCATCTGTCGCGCTGCCGCCGCCGCCATCCAG
TCGTATCACCTAACGGCCTTTCAGCAAAAGGTTCTGCATGTCGAGCAAGCCATCCTCAGCCATGACCCGGACTTT
GTCGGCGCCTACAGCATCGTGCCACTCACGGCCGTCGTGGGCGAGTTTCAGCAGTGGACGAAAAGAATGGAGTGC
TTGTTGGAGACGGCGCAGTTCATACTGGCCAAGCGTGACGCTTCTGCTGCGAGCCTAGGTGTCGACTTGATCGAT
CGTCTGAGGACTCAGGTTCAGAGCGGATATCGGGACGTCTCCGAGACGGCTCGGAGCCTGTTATCCGCTTCGGAA
ACGGCATGGCTGAAGCAAGTCTCGGCTTGGATACTCTACGGCCGGCTTCCGAGCTTTGGCGCCGCCGACTTCTTC
GTTCAGGCTTCCGGCGAGGTAGTCTCTCTTTCTCGAAATGTGCTCACGATTGCTCATGATGTAATAGGAGTTTGT
ATTCTTATCAGACTGTGTGCCGTCGTTTGTCACGCCCGCTACGGCCTCGTCCATGCTCTACATCGGCACGACGCT
TCGCCGCATCCGTGAGATGGGAGAGTCTTGGGCCGGGCTGGACCACGTCTCGTCCAAGAAGCTGCAGCAACTGAC
ACGTCTCAAATCCCCGTTCTCTTCCGTCGAATTCTCCCGAGCCGTCGGTTCCATCCGCCTCTCTCTCTCTCAAGA
GTCGTTGTCGAAGCTGCTGCCCTTGGCCAAGGTGGTTGAGATGCTGCATCTCTTGCGGGACTTTTTCCTCCTCGG
GCGAGGCGAGTTCGCTCTGGCTCTCGTGCAAGAAGCCGACGGCGAGATACGCGACAGATGGCGCAGATGGACCGA
CGACGGCGTCGAAAAGGTGGCCGTCAGCGAGGGACAGATCGTCGCCGTACTCGACAGGACCTGGGCCGTGCTGGC
AGCCATGCAAGGTCAGCACGGCGACGAGGACGAACAGCTGGATCTCGCCCGCGATCTGCTCCGACTGACGAGCAA
GACTCCGGCTGCCCTCGGCTCCGGACCCGGTCTCAGCGCCGACGCCGCCGAGGCCATCGAGGCGCTGCCCTTTGC
GGACCTGCTTCTCTCGGTTCCGACGACGCTCCGTCTCGACCTCCCCTCGCCGCTCGACATGGTCATTTCGCAGTC
CGACATGCACATCTACGGCCAGATCAACGCGTATCTGCTGTCTCTGCGTCGCGCCCACATCCGGCTGACGGATCT
ATGGAAGATGACGTCGCTCCGACGTCACCATCCGGCCCCGACGGGCGCAGAAGACCAGGCCCTCTCTCTGCGAAG
GCGGTGGTCGGCGAGGACGGCGGCTCTTCGCGGATCGTGGACGACGGCCAGCGCTGCTGTCTTCTTCCTCGCAGA
GACGGAGGCTTACCTTCAGGCTGACGTTGTGGGCGGCATGTGGGAGTCGTTGACCTCGTGGCTCGAGGGTCGACG
GGACGATGGGGGAGACGGTCAGAATAGTGACGATGACGCAGATCTCTTTCTGCTGGAAGAGACATGTACCTCGAA
TGGAGACCAGACACCTATTCACGACCCCCAGACGCTGGCCAGGGCTCACTCGGTCTACCTCGGCGCCCTCGCCAG
ACGGCTCCTCCTCACCGAGCCGACCTTCACACAGCCACTATACGCGCTACTCAAGCACATGGACCGTCTGGCCTC
CCTCATGCGACGCCTCCACGCCGTCTTCATCGCAGCCGACCTCGAAGCCGACGCCGGCGTCGTCGACGCGTCCCT
AGATCTAGCCCAGGAAGAAGCCCACCTCACAGCCCAGCTAGGAACTACGGAAACGCAGGTCAGGAAGGGCATCGA
GCATGTTGTGAACCAGCTCCGCAGTCTCGAAAGCAGCGTCGAGGAGGAAGAAGGTGTTGAAGGTGACGACGTGGA
CGACGTGCTTCCAGGTCGCAAGTATGTGGTTGGCAGCATCGGGGGGGTGGACCGTCTGCTGATGAAGCTTGATTT
CGGGAGCTGGCTTGGGAACAGGCTGGATGGGTGGGATTTGGTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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