Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|893
Gene name
LocationContig_1310:1637..2750
Strand+
Gene length (bp)1113
Transcript length (bp)1056
Coding sequence length (bp)1056
Protein length (aa) 352

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 260 282 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|893
MLVEQLAFAASAAAFLVIPVGTLRAGAPDAISALPIESESFGLEKSTLSRTVTVPCAECKGSDSELELEFKVEHG
SMLSLNGHQFFPRPDPPASGELVATLIDAGRREEDKTLGYGLAMTPVATDDYNQLQLIELDLSIIQVDREWVDHV
PIVKTHVIKTVTGDLFIQDIQLQENDRPGCSGLMCRAKAMADKMLHALGSLKKGCMMRHGHHGLGRLPGFPHVAD
AEENQLETPTHGDEEHHHNWRLLLANIASHIFLPVLMGVTAGVGVAVLAMVLCSVVIRLHRLVKSKRARRAGGCC
RKKQAARRETDPVEKIGLMEALESDELPPQYQDDAEAADNNKTDTTTTNKK*
Coding >Ophun1|893
ATGCTCGTCGAACAGCTCGCCTTCGCGGCTTCGGCTGCAGCCTTCCTCGTCATTCCCGTCGGCACTCTCCGAGCC
GGTGCCCCCGACGCCATCAGCGCTCTCCCCATCGAGTCGGAGTCTTTCGGTCTGGAGAAGAGCACGCTTTCACGG
ACCGTTACTGTTCCCTGCGCGGAGTGCAAGGGCTCTGATAGCGAGCTTGAGCTCGAGTTCAAGGTTGAGCATGGC
TCCATGCTGTCGCTCAACGGTCACCAGTTCTTCCCGCGACCCGACCCTCCGGCTTCCGGCGAACTTGTCGCCACT
CTGATCGACGCCGGTCGTCGCGAGGAGGATAAGACGTTGGGATACGGTCTGGCCATGACGCCCGTCGCTACCGAC
GACTACAACCAGCTTCAGCTGATTGAACTCGACCTCTCCATCATCCAGGTCGACCGCGAATGGGTCGACCACGTG
CCCATCGTCAAGACGCACGTCATCAAGACCGTTACTGGCGACCTCTTCATTCAAGATATCCAGCTTCAAGAGAAC
GACAGGCCTGGCTGCAGCGGTCTCATGTGCCGAGCCAAGGCCATGGCCGACAAGATGCTTCACGCCCTCGGCTCC
CTCAAGAAGGGCTGCATGATGCGCCACGGACACCACGGGCTCGGTCGTCTTCCCGGCTTCCCCCACGTGGCCGAT
GCCGAAGAGAACCAGCTCGAGACGCCTACCCACGGTGACGAGGAGCACCATCACAACTGGCGTCTGCTCCTGGCC
AACATTGCCTCTCATATCTTCCTGCCCGTCCTCATGGGCGTTACGGCTGGTGTTGGTGTTGCTGTGCTCGCCATG
GTTCTCTGCAGCGTCGTCATCCGCCTCCACAGGCTGGTCAAGAGCAAGCGCGCCCGCCGCGCTGGAGGCTGCTGC
CGCAAGAAGCAGGCTGCTCGTCGCGAGACGGACCCCGTCGAGAAGATTGGTCTCATGGAGGCTCTGGAGAGCGAC
GAGTTGCCCCCTCAGTACCAGGACGACGCAGAGGCTGCCGACAACAACAAGACGGATACCACCACCACCAACAAG
AAATAG
Transcript >Ophun1|893
ATGCTCGTCGAACAGCTCGCCTTCGCGGCTTCGGCTGCAGCCTTCCTCGTCATTCCCGTCGGCACTCTCCGAGCC
GGTGCCCCCGACGCCATCAGCGCTCTCCCCATCGAGTCGGAGTCTTTCGGTCTGGAGAAGAGCACGCTTTCACGG
ACCGTTACTGTTCCCTGCGCGGAGTGCAAGGGCTCTGATAGCGAGCTTGAGCTCGAGTTCAAGGTTGAGCATGGC
TCCATGCTGTCGCTCAACGGTCACCAGTTCTTCCCGCGACCCGACCCTCCGGCTTCCGGCGAACTTGTCGCCACT
CTGATCGACGCCGGTCGTCGCGAGGAGGATAAGACGTTGGGATACGGTCTGGCCATGACGCCCGTCGCTACCGAC
GACTACAACCAGCTTCAGCTGATTGAACTCGACCTCTCCATCATCCAGGTCGACCGCGAATGGGTCGACCACGTG
CCCATCGTCAAGACGCACGTCATCAAGACCGTTACTGGCGACCTCTTCATTCAAGATATCCAGCTTCAAGAGAAC
GACAGGCCTGGCTGCAGCGGTCTCATGTGCCGAGCCAAGGCCATGGCCGACAAGATGCTTCACGCCCTCGGCTCC
CTCAAGAAGGGCTGCATGATGCGCCACGGACACCACGGGCTCGGTCGTCTTCCCGGCTTCCCCCACGTGGCCGAT
GCCGAAGAGAACCAGCTCGAGACGCCTACCCACGGTGACGAGGAGCACCATCACAACTGGCGTCTGCTCCTGGCC
AACATTGCCTCTCATATCTTCCTGCCCGTCCTCATGGGCGTTACGGCTGGTGTTGGTGTTGCTGTGCTCGCCATG
GTTCTCTGCAGCGTCGTCATCCGCCTCCACAGGCTGGTCAAGAGCAAGCGCGCCCGCCGCGCTGGAGGCTGCTGC
CGCAAGAAGCAGGCTGCTCGTCGCGAGACGGACCCCGTCGAGAAGATTGGTCTCATGGAGGCTCTGGAGAGCGAC
GAGTTGCCCCCTCAGTACCAGGACGACGCAGAGGCTGCCGACAACAACAAGACGGATACCACCACCACCAACAAG
AAATAG
Gene >Ophun1|893
ATGCTCGTCGAACAGCTCGCCTTCGCGGCTTCGGCTGCAGCCTTCCTCGTCATTCCCGTCGGCACTCTCCGAGCC
GGTGCCCCCGACGCCATCAGCGCTCTCCCCATCGAGTCGGAGTCTTTCGGTCTGGAGAAGAGCACGCTTTCACGG
ACCGTTACTGTTCCCTGCGCGGAGTGCAAGGGCTCTGATAGCGAGCTTGAGCTCGAGTTCAAGGTTGAGCATGGC
TCCATGCTGTCGCTCAACGGTCACCAGTTCTTCCCGCGACCCGACCCTCCGGCTTCCGGCGAACTTGTCGCCACT
CTGATCGACGCCGGTCGTCGCGAGGAGGATAAGACGTTGGGATACGGTCTGGCCATGACGCCCGTCGCTACCGAC
GACTACAACCAGCTTCAGCTGATTGAACTCGACCTCTCCATCATCCAGGTCGACCGCGAATGGGTCGACCACGTG
CCCATCGTCAAGACGCACGTCATCAAGACCGTTACTGGCGACCTCTTCATTCAAGATATCCAGCTTCAAGAGAAC
GACAGGCCTGGCTGCAGCGGTCTCATGTGCCGAGCCAAGGCCATGGCCGACAAGATGCTTCACGCCCTCGGCTCC
CTCAAGAAGGGCTGCATGATGCGCCACGGACACCACGGGCTCGGTCGTCTTCCCGGCTTCCCCCACGTGGCCGAT
GCCGAAGAGAACCAGCTCGAGACGCCTACCCACGGTGACGAGGAGCACCATCACAACTGGCGTCTGCTCCTGGCC
AACATTGCCTCTCATATCTTCCTGCCCGTCCTCATGGGCGTTACGGCTGGTGTTGGTGTTGCTGTGTACGTAACC
ATTCCTCCAATGTGTCGGGTATCCTTACTGACTTTGATGTGCAACAGGCTCGCCATGGTTCTCTGCAGCGTCGTC
ATCCGCCTCCACAGGCTGGTCAAGAGCAAGCGCGCCCGCCGCGCTGGAGGCTGCTGCCGCAAGAAGCAGGCTGCT
CGTCGCGAGACGGACCCCGTCGAGAAGATTGGTCTCATGGAGGCTCTGGAGAGCGACGAGTTGCCCCCTCAGTAC
CAGGACGACGCAGAGGCTGCCGACAACAACAAGACGGATACCACCACCACCAACAAGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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