Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|850
Gene name
LocationContig_13:47421..48503
Strand-
Gene length (bp)1082
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.4E-16 38 162
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 6.2E-07 47 164
PF08659 KR KR domain 2.2E-05 41 129

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 17 320 4.0E-20
sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 18 324 5.0E-20
sp|Q6UX07|DHR13_HUMAN Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 18 322 6.0E-20
sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 34 320 6.0E-19
sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 13 326 7.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 17 320 4.0E-20
sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 18 324 5.0E-20
sp|Q6UX07|DHR13_HUMAN Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 18 322 6.0E-20
sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 34 320 6.0E-19
sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 13 326 7.0E-18
sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 13 326 5.0E-17
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 25 320 7.0E-17
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 35 279 9.0E-17
sp|Q5SS80|DHR13_MOUSE Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 33 324 4.0E-16
sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 33 322 5.0E-16
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 14 331 6.0E-15
sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 13 326 7.0E-15
sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 34 320 5.0E-14
sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 21 326 1.0E-13
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 34 279 1.0E-13
sp|Q9VLU5|WWOX_DROME WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 34 277 1.0E-12
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 34 284 3.0E-12
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 38 333 4.0E-12
sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 34 284 2.0E-11
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 34 279 2.0E-11
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 34 284 3.0E-11
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 34 279 3.0E-11
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 37 324 2.0E-10
sp|Q42536|PORA_ARATH Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 41 180 3.0E-10
sp|Q42850|PORB_HORVU Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 28 180 6.0E-10
sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 39 272 6.0E-10
sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=1 SV=1 39 302 6.0E-10
sp|O80333|POR_MARPA Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1 24 180 9.0E-10
sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 39 297 1.0E-09
sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 38 241 7.0E-09
sp|P40580|BZRD_YEAST Benzil reductase ((S)-benzoin forming) IRC24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC24 PE=1 SV=1 38 242 7.0E-09
sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 39 241 7.0E-09
sp|Q8W3D9|PORB_ORYSJ Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 28 180 9.0E-09
sp|Q03326|OXIR_STRAT Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1 34 241 1.0E-08
sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 38 241 2.0E-08
sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 39 303 5.0E-08
sp|P56937|DHB7_HUMAN 3-keto-steroid reductase OS=Homo sapiens GN=HSD17B7 PE=1 SV=1 39 127 2.0E-07
sp|O48741|PORC_ARATH Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1 30 180 9.0E-07
sp|Q9SDT1|POR_DAUCA Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1 41 148 1.0E-06
sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1 36 162 2.0E-06
sp|P35320|OXIR_STRLI Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1 34 241 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|850
MSGQLQSQASFETTILGFLYRQFTRQKPLSPDADLTDNVAVVTGSNTGLGLEAARQLLELGLSHLILAVRTAAKG
EAAAERLRRDFPAAVVVVWIVDLESYPSVRAFAERCAGLTRLDIVILNAGLMRPSYTIAPETENELTLQVNYLST
VLLAILLLPVLKASCVNGSRKPSVLSIVGSDLAYRARIETRGPVLQQFERPERYNGYEWYPMSKLLLTLFIAKLA
DIVDSDVVLINTVNPGMTKGTDFFREFPSVLVKLMGLLQWLLARSVVVGAATYVDAVVSYGEESHGSFISDWAIK
PYPPIYYTAEGRELRDRLWDETMEELNFAGAASIVNSLRGD*
Coding >Ophun1|850
ATGTCAGGCCAACTTCAAAGCCAAGCCAGCTTCGAGACCACCATTCTCGGCTTCCTCTACCGCCAATTCACGCGC
CAGAAGCCCCTGTCCCCAGACGCCGATCTCACAGACAACGTCGCCGTCGTCACCGGCAGCAACACTGGTCTCGGC
CTGGAAGCCGCCCGGCAGCTACTCGAGCTCGGTCTGTCGCATCTGATACTCGCTGTTCGGACGGCGGCCAAGGGT
GAAGCGGCGGCGGAGCGTTTGCGGCGCGACTTCCCGGCTGCCGTCGTCGTGGTTTGGATCGTCGACCTTGAGTCC
TATCCGTCGGTGCGGGCGTTTGCGGAGAGGTGCGCGGGATTGACGCGGTTGGATATCGTTATTCTCAACGCTGGT
CTGATGAGACCTTCATATACGATTGCGCCTGAGACGGAGAACGAGCTCACCCTACAGGTCAATTATTTGTCCACT
GTCCTTCTCGCTATCCTGCTTCTTCCCGTTTTGAAGGCGAGCTGCGTTAATGGCTCGCGGAAACCGTCGGTTCTT
TCCATCGTCGGATCTGACTTGGCTTATCGGGCGAGGATAGAGACCCGAGGTCCGGTGCTGCAACAGTTTGAGAGG
CCCGAGCGATACAATGGCTATGAATGGTATCCCATGTCTAAGCTGCTATTGACTCTGTTCATTGCCAAGCTCGCC
GATATTGTCGACTCCGACGTCGTCCTCATCAACACGGTGAATCCAGGCATGACCAAGGGAACCGACTTCTTCCGC
GAGTTTCCCTCGGTGCTGGTGAAGCTGATGGGCTTGTTACAATGGCTCCTGGCCAGGTCCGTGGTCGTTGGTGCT
GCTACGTACGTCGATGCGGTTGTGAGTTATGGAGAAGAGAGTCATGGTTCTTTCATCAGCGACTGGGCCATTAAG
CCGTATCCCCCGATTTACTACACCGCCGAGGGCAGAGAGCTTAGAGATCGCCTTTGGGACGAGACGATGGAGGAG
CTCAACTTTGCGGGCGCCGCATCTATCGTGAACAGTCTCAGAGGAGACTGA
Transcript >Ophun1|850
ATGTCAGGCCAACTTCAAAGCCAAGCCAGCTTCGAGACCACCATTCTCGGCTTCCTCTACCGCCAATTCACGCGC
CAGAAGCCCCTGTCCCCAGACGCCGATCTCACAGACAACGTCGCCGTCGTCACCGGCAGCAACACTGGTCTCGGC
CTGGAAGCCGCCCGGCAGCTACTCGAGCTCGGTCTGTCGCATCTGATACTCGCTGTTCGGACGGCGGCCAAGGGT
GAAGCGGCGGCGGAGCGTTTGCGGCGCGACTTCCCGGCTGCCGTCGTCGTGGTTTGGATCGTCGACCTTGAGTCC
TATCCGTCGGTGCGGGCGTTTGCGGAGAGGTGCGCGGGATTGACGCGGTTGGATATCGTTATTCTCAACGCTGGT
CTGATGAGACCTTCATATACGATTGCGCCTGAGACGGAGAACGAGCTCACCCTACAGGTCAATTATTTGTCCACT
GTCCTTCTCGCTATCCTGCTTCTTCCCGTTTTGAAGGCGAGCTGCGTTAATGGCTCGCGGAAACCGTCGGTTCTT
TCCATCGTCGGATCTGACTTGGCTTATCGGGCGAGGATAGAGACCCGAGGTCCGGTGCTGCAACAGTTTGAGAGG
CCCGAGCGATACAATGGCTATGAATGGTATCCCATGTCTAAGCTGCTATTGACTCTGTTCATTGCCAAGCTCGCC
GATATTGTCGACTCCGACGTCGTCCTCATCAACACGGTGAATCCAGGCATGACCAAGGGAACCGACTTCTTCCGC
GAGTTTCCCTCGGTGCTGGTGAAGCTGATGGGCTTGTTACAATGGCTCCTGGCCAGGTCCGTGGTCGTTGGTGCT
GCTACGTACGTCGATGCGGTTGTGAGTTATGGAGAAGAGAGTCATGGTTCTTTCATCAGCGACTGGGCCATTAAG
CCGTATCCCCCGATTTACTACACCGCCGAGGGCAGAGAGCTTAGAGATCGCCTTTGGGACGAGACGATGGAGGAG
CTCAACTTTGCGGGCGCCGCATCTATCGTGAACAGTCTCAGAGGAGACTGA
Gene >Ophun1|850
ATGTCAGGCCAACTTCAAAGCCAAGCCAGCTTCGAGACCACCATTCTCGGCTTCCTCTACCGCCAATTCACGCGC
CAGAAGCCCCTGTCCCCAGACGCCGATCTCACAGACAACGTCGCCGTCGTCACCGGCAGCAACACTGGTCTCGGC
CTGGAAGCCGCCCGGCAGCTACTCGAGCTCGGTCTGTCGCATCTGATACTCGCTGTTCGGACGGCGGCCAAGGGT
GAAGCGGCGGCGGAGCGTTTGCGGCGCGACTTCCCGGCTGCCGTCGTCGTGGTTTGGATCGTCGACCTTGAGTCC
TATCCGTCGGTGCGGGCGTTTGCGGAGAGGTGCGCGGGATTGACGCGGTTGGATATCGTTATTCTCAACGCTGGT
CTGATGAGACCTTCATATACGATTGCGCCTGAGACGGAGAACGAGCTCACCCTACAGGTCAATTATTTGTCCACT
GTCCTTCTCGCTATCCTGCTTCTTCCCGTTTTGAAGGCGAGCTGCGTTAATGGCTCGCGGAAACCGTCGGTTCTT
TCCATCGTCGGATCTGACTTGGCTTATCGGGCGAGGATAGAGACCCGAGGTCCGGTGCTGCAACAGTTTGAGAGG
CCCGAGCGATACAATGGCTATGAATGGTATCCCATGTCTAAGCTGCTATTGACTCTGTTCATTGCCAAGCTCGCC
GATATTGTCGACTCCGACGTCGTCCTCATCAACACGGTGAATCCAGGCATGACCAAGGGAACCGACTTCTTCCGC
GAGTTTCCCTCGGTGCTGGTGAAGCTGATGGGCTTGTTACAATGGCTCCTGGCCAGGTCCGTGGTCGTTGGTGCT
GCTACGTACGTCGATGCGGTTGTGAGTTATGGAGAAGAGAGTCATGGTTCTTTCATCAGCGACTGGGCCATTAAG
CCGTGAGTTTCGACGCCAACAGTTGTGGGAGGAGAAGACATTCTGATGTGCTCAACAGGTATCCCCCGATTTACT
ACACCGCCGAGGGCAGAGAGCTTAGAGATCGCCTTTGGGACGAGACGATGGAGGAGCTCAACTTTGCGGGCGCCG
CATCTATCGTGAACAGTCTCAGAGGAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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