© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|848 |
| Gene name | |
| Location | Contig_13:43269..45062 |
| Strand | + |
| Gene length (bp) | 1793 |
| Transcript length (bp) | 1557 |
| Coding sequence length (bp) | 1557 |
| Protein length (aa) | 519 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.0E-22 | 86 | 219 |
| PF08031 | BBE | Berberine and berberine like | 2.4E-05 | 469 | 513 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 65 | 508 | 4.0E-25 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 72 | 508 | 2.0E-20 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 88 | 508 | 2.0E-17 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 86 | 513 | 1.0E-15 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 52 | 280 | 4.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 65 | 508 | 4.0E-25 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 72 | 508 | 2.0E-20 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 88 | 508 | 2.0E-17 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 86 | 513 | 1.0E-15 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 52 | 280 | 4.0E-10 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 96 | 507 | 5.0E-10 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 86 | 349 | 2.0E-08 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 81 | 336 | 1.0E-07 |
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 91 | 232 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|848 MNHMARIAALALALLGTFVTAAPFGASTVPRYFQASPYTRRGLSVVQVQYELGAIVSNGTAIFGPRSSAWANATE RWNTFDVPHIEIVVEVKTEADVSKVVKYCNDNSIEFLAYTRGHGFTSTLTKFRGIEINLSQLKAIKIQPDGKSAW FQGGTYGKLVIDTLWDRGYVTTTGSSGCVGLMGPGLGGGFGRYQGQYGLVSDNFVNLNVVLADGSTVTVNETSHS DLFWAMRGAGHNFGIVTSAELKIYPRKIHVDTWHYHNYVWTQDKLEAVFEALNKFQGKGEIPPLMGANFGQFSVE PSTNQTKAVISWTFAYEGPAQEAEALLKPFNDIKAILSTSGDVPYPQLMALQGTGINSPSCASNPYIGGTANLQV YNVTAERQIMDVLNERISQHPQLAAGARVFHEGYASKRTQEIDPRSTAYAHRDDYLVVFFAAVASPGLEKVARKL TQDVRRFWYGGQPGRLPTAYVNHAAGGETVESLYGYEPWRLERLRHLKAKYDPKNSFRFYNPIVKEYM* |
| Coding | >Ophun1|848 ATGAATCACATGGCTCGGATTGCGGCTCTCGCGCTCGCTTTGCTTGGAACATTCGTTACTGCGGCCCCCTTTGGC GCTTCCACCGTCCCTCGTTATTTCCAAGCTTCCCCTTACACGCGTCGAGGCCTTTCAGTCGTTCAAGTGCAGTAC GAGCTGGGGGCAATCGTGTCGAATGGGACAGCCATTTTTGGGCCTCGGAGCTCGGCGTGGGCTAATGCAACGGAG AGATGGAATACGTTTGATGTGCCTCACATCGAGATCGTGGTGGAGGTTAAAACGGAGGCAGACGTGTCCAAGGTG GTCAAGTATTGCAACGACAACAGTATCGAGTTTCTGGCTTACACACGAGGCCACGGTTTTACCTCGACTTTGACC AAGTTTAGGGGCATCGAAATCAATCTCTCTCAACTAAAAGCCATTAAGATACAACCCGACGGCAAGTCGGCTTGG TTCCAAGGAGGAACTTACGGAAAACTGGTCATTGATACACTCTGGGATCGCGGCTACGTCACAACCACCGGGAGC AGCGGTTGCGTTGGCCTCATGGGACCCGGTCTAGGCGGAGGCTTCGGGCGTTATCAAGGCCAATACGGTCTCGTG AGCGACAACTTCGTCAACCTGAATGTCGTCCTCGCCGACGGCTCGACAGTCACGGTGAATGAAACGAGCCATTCT GATCTCTTCTGGGCTATGAGGGGAGCCGGCCACAACTTCGGCATCGTGACCAGCGCGGAGCTCAAGATCTATCCT CGCAAGATACATGTAGACACTTGGCATTACCACAACTATGTCTGGACGCAGGATAAGCTGGAAGCCGTTTTCGAG GCCTTGAATAAGTTTCAGGGCAAGGGGGAGATTCCGCCGCTGATGGGCGCCAACTTTGGCCAGTTTTCGGTTGAG CCTTCTACCAACCAAACCAAAGCTGTCATTAGCTGGACATTCGCGTACGAGGGCCCCGCTCAGGAGGCAGAGGCT CTACTGAAGCCTTTCAATGACATCAAGGCTATCTTGAGCACCAGCGGAGATGTTCCCTATCCTCAGCTGATGGCG CTTCAAGGAACGGGTATCAACAGTCCGTCCTGTGCCTCAAACCCGTACATTGGCGGCACAGCCAACCTTCAGGTC TACAACGTCACCGCTGAGCGCCAGATCATGGATGTCTTGAACGAGAGAATATCTCAGCACCCACAACTCGCGGCC GGGGCTCGTGTCTTCCACGAGGGGTACGCCAGCAAGAGGACTCAAGAGATTGACCCGCGCTCGACAGCCTATGCT CACCGTGACGATTATCTTGTTGTTTTCTTTGCCGCCGTGGCGTCTCCGGGACTGGAAAAGGTTGCTCGGAAGCTG ACCCAGGACGTTCGACGTTTCTGGTACGGCGGTCAGCCAGGTCGGCTTCCTACAGCCTACGTCAACCACGCTGCC GGCGGAGAAACAGTCGAATCTTTGTACGGTTACGAGCCTTGGCGTTTGGAGAGGCTGCGGCACCTCAAGGCCAAG TACGATCCCAAGAATAGTTTCCGTTTTTATAATCCTATCGTCAAAGAGTACATGTAA |
| Transcript | >Ophun1|848 ATGAATCACATGGCTCGGATTGCGGCTCTCGCGCTCGCTTTGCTTGGAACATTCGTTACTGCGGCCCCCTTTGGC GCTTCCACCGTCCCTCGTTATTTCCAAGCTTCCCCTTACACGCGTCGAGGCCTTTCAGTCGTTCAAGTGCAGTAC GAGCTGGGGGCAATCGTGTCGAATGGGACAGCCATTTTTGGGCCTCGGAGCTCGGCGTGGGCTAATGCAACGGAG AGATGGAATACGTTTGATGTGCCTCACATCGAGATCGTGGTGGAGGTTAAAACGGAGGCAGACGTGTCCAAGGTG GTCAAGTATTGCAACGACAACAGTATCGAGTTTCTGGCTTACACACGAGGCCACGGTTTTACCTCGACTTTGACC AAGTTTAGGGGCATCGAAATCAATCTCTCTCAACTAAAAGCCATTAAGATACAACCCGACGGCAAGTCGGCTTGG TTCCAAGGAGGAACTTACGGAAAACTGGTCATTGATACACTCTGGGATCGCGGCTACGTCACAACCACCGGGAGC AGCGGTTGCGTTGGCCTCATGGGACCCGGTCTAGGCGGAGGCTTCGGGCGTTATCAAGGCCAATACGGTCTCGTG AGCGACAACTTCGTCAACCTGAATGTCGTCCTCGCCGACGGCTCGACAGTCACGGTGAATGAAACGAGCCATTCT GATCTCTTCTGGGCTATGAGGGGAGCCGGCCACAACTTCGGCATCGTGACCAGCGCGGAGCTCAAGATCTATCCT CGCAAGATACATGTAGACACTTGGCATTACCACAACTATGTCTGGACGCAGGATAAGCTGGAAGCCGTTTTCGAG GCCTTGAATAAGTTTCAGGGCAAGGGGGAGATTCCGCCGCTGATGGGCGCCAACTTTGGCCAGTTTTCGGTTGAG CCTTCTACCAACCAAACCAAAGCTGTCATTAGCTGGACATTCGCGTACGAGGGCCCCGCTCAGGAGGCAGAGGCT CTACTGAAGCCTTTCAATGACATCAAGGCTATCTTGAGCACCAGCGGAGATGTTCCCTATCCTCAGCTGATGGCG CTTCAAGGAACGGGTATCAACAGTCCGTCCTGTGCCTCAAACCCGTACATTGGCGGCACAGCCAACCTTCAGGTC TACAACGTCACCGCTGAGCGCCAGATCATGGATGTCTTGAACGAGAGAATATCTCAGCACCCACAACTCGCGGCC GGGGCTCGTGTCTTCCACGAGGGGTACGCCAGCAAGAGGACTCAAGAGATTGACCCGCGCTCGACAGCCTATGCT CACCGTGACGATTATCTTGTTGTTTTCTTTGCCGCCGTGGCGTCTCCGGGACTGGAAAAGGTTGCTCGGAAGCTG ACCCAGGACGTTCGACGTTTCTGGTACGGCGGTCAGCCAGGTCGGCTTCCTACAGCCTACGTCAACCACGCTGCC GGCGGAGAAACAGTCGAATCTTTGTACGGTTACGAGCCTTGGCGTTTGGAGAGGCTGCGGCACCTCAAGGCCAAG TACGATCCCAAGAATAGTTTCCGTTTTTATAATCCTATCGTCAAAGAGTACATGTAA |
| Gene | >Ophun1|848 ATGAATCACATGGCTCGGATTGCGGCTCTCGCGCTCGCTTTGCTTGGAACATTCGTTACTGCGGCCCCCTTTGGC GCTTCCACCGTCCCTCGTTATTTCCAAGCTTCCCCTTACACGCGTCGAGGCCTTTCAGTCGTTCAAGTGCAGTAC GAGCTGGGGGCAATCGTGTCGAATGGGACAGCCATTTTTGGGCCTCGGAGCTCGGCGTGGGCTAATGCAACGGAG AGATGGAATACGTTTGATGTGCCTCACATCGAGATCGTGGTGGAGGTTAAAACGGAGGCAGACGTGTCCAAGGTG GTGAGTATACTCTTTTTGTCTGGTGGTAGGAGTCTACATAGACAAAGCTCATTGAGACGGTGGTTCTAGGTCAAG TATTGCAACGACAACAGTATCGAGTTTCTGGCTTACACACGAGGCCACGGTTTTACCTCGACTTTGACCAAGTTT AGGGGCATCGAAATCAATCTCTCTCAACTAAAAGCCATTAAGATACAACCCGACGGCAAGTCGGCTTGGTTCCAA GGAGGAACTTACGGAAAACTGGTCATTGATACACTCTGGGATCGCGGCTACGTCACAAGTAAGCCACTGAGAGTG AAAGCTTGGACACCTGAAAACACTCGCTGACAGAATTTCCCTGAAGCCACCGGGAGCAGCGGTTGCGTTGGCCTC ATGGGACCCGGTCTAGGCGGAGGCTTCGGGCGTTATCAAGGCCAATACGGTCTCGTGAGCGACAACTTCGTCAAC CTGAATGTCGTCCTCGCCGACGGCTCGACAGTCACGGTGAATGAAACGAGCCATTCTGATCTCTTCTGGGCTATG AGGGGAGCCGGCCACAACTTCGGCATCGTGACCAGCGCGGAGCTCAAGATCTATCCTCGCAAGATACATGTAGAC ACTTGGCATTACCACAACTATGTCTGGACGCAGGATAAGCTGGAAGCCGTTTTCGAGGCCTTGAATAAGTTTCAG GGCAAGGGGGAGATTCCGCCGCTGATGGGCGCCAACTTTGGCCAGTTTTCGGTTGAGCCTTCTACCAACCAAACC AAAGTACGTTCTCTTCAGACAGTCAACACCGAGGAGATCCGGCTGACAGTATGCAGGCTGTCATTAGCTGGACAT TCGCGTACGAGGGCCCCGCTCAGGAGGCAGAGGCTCTACTGAAGCCTTTCAATGACATCAAGGCTATCTTGAGCA CCAGCGGAGATGTTCCCTATCCTCAGCTGATGGCGCTTCAAGGAACGGGTATCAACAGTCCGTCCTGTGCCTCAA ACCCGTACATTGGCGGCACAGCCAACCTTCAGGTCTACAACGTCACCGCTGAGCGCCAGATCATGGATGTCTTGA ACGAGAGAATATCTCAGCACCCACAACTCGCGGCCGGGGCTCGTGTCTTCCACGAGGGGTACGCCAGCAAGAGGA CTCAAGAGATTGACCCGCGCTCGACAGCCTATGCTCACCGTGACGATTATCTTGTTGTGTGAGTCTTGACGGGGT TTCACAGACTGACTGATGCTGACAGCTCGTGCAGTTTCTTTGCCGCCGTGGCGTCTCCGGGACTGGAAAAGGTTG CTCGGAAGCTGACCCAGGACGTTCGACGTTTCTGGTACGGCGGTCAGCCAGGTCGGCTTCCTACAGCCTACGTCA ACCACGCTGCCGGCGGAGAAACAGTCGAATCTTTGTACGGTTACGAGCCTTGGCGTTTGGAGAGGCTGCGGCACC TCAAGGCCAAGTACGATCCCAAGAATAGTTTCCGTTTTTATAATCCTATCGTCAAAGAGTACATGTAA |