Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|846
Gene name
LocationContig_13:40300..41221
Strand+
Gene length (bp)921
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 2.1E-15 40 184
PF08659 KR KR domain 3.9E-07 41 134

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 37 300 4.0E-22
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 21 301 5.0E-21
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 33 301 2.0E-20
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 37 301 3.0E-20
sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 21 301 1.0E-19
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 37 300 4.0E-22
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 21 301 5.0E-21
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 33 301 2.0E-20
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 37 301 3.0E-20
sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 21 301 1.0E-19
sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 37 255 2.0E-18
sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 21 301 2.0E-18
sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 35 266 8.0E-18
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 37 301 1.0E-17
sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 34 254 1.0E-17
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 37 301 4.0E-17
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 37 288 8.0E-17
sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 21 301 9.0E-17
sp|Q9VLU5|WWOX_DROME WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 37 254 1.0E-16
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 38 304 5.0E-16
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 26 298 3.0E-13
sp|Q42850|PORB_HORVU Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 41 255 4.0E-13
sp|P35320|OXIR_STRLI Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1 37 306 9.0E-13
sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 37 245 4.0E-12
sp|Q03326|OXIR_STRAT Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1 37 303 6.0E-12
sp|Q6UX07|DHR13_HUMAN Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 37 245 8.0E-12
sp|Q8W3D9|PORB_ORYSJ Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 27 183 8.0E-12
sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 21 301 5.0E-11
sp|O80333|POR_MARPA Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1 38 183 7.0E-11
sp|Q42536|PORA_ARATH Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 26 183 1.0E-10
sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 38 304 1.0E-10
sp|Q5SS80|DHR13_MOUSE Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 37 245 1.0E-10
sp|O48741|PORC_ARATH Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1 41 255 1.0E-10
sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 40 181 1.0E-09
sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 14 183 1.0E-09
sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 42 181 3.0E-09
sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 42 181 1.0E-08
sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 40 219 1.0E-08
sp|P21218|PORB_ARATH Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3 43 183 3.0E-08
sp|Q53877|DNRU_STRS5 Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 27 306 4.0E-08
sp|Q92247|BLI4_NEUCR Putative oxidoreductase bli-4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bli-4 PE=1 SV=1 24 299 7.0E-08
sp|A6QP05|DHR12_BOVIN Dehydrogenase/reductase SDR family member 12 OS=Bos taurus GN=DHRS12 PE=2 SV=1 34 181 8.0E-08
sp|Q9RPT1|RHLG_PSEAE Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rhlG PE=1 SV=1 37 181 8.0E-08
sp|A0PJE2|DHR12_HUMAN Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2 34 181 1.0E-07
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 40 301 1.0E-07
sp|O66148|POR_LEPBY Light-dependent protochlorophyllide reductase OS=Leptolyngbya boryana GN=por PE=3 SV=2 41 254 1.0E-07
sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 40 181 2.0E-07
sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1 38 246 3.0E-07
sp|Q9SDT1|POR_DAUCA Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1 41 270 5.0E-07
sp|Q9ZAU1|DNRU_STRPE Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 37 306 7.0E-07
sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=2 SV=1 40 181 2.0E-06
sp|Q9Y140|DHRS7_DROME Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila melanogaster GN=CG7601 PE=2 SV=1 9 246 3.0E-06
sp|Q01289|POR_PEA Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1 43 184 3.0E-06
sp|Q41249|PORA_CUCSA Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1 41 183 6.0E-06
sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3 42 181 7.0E-06
sp|Q3U0B3|DHR11_MOUSE Dehydrogenase/reductase SDR family member 11 OS=Mus musculus GN=Dhrs11 PE=1 SV=1 40 153 9.0E-06
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 39 301 1.0E-05
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|846
MAQKFSISPEKEASLSQYFYRQFFGNTPVLTQDDVCLTGKTAIVTGSNTGLGLEVSRQLLDLGLSRLVLAVRDVA
KGEAARRDLCQGRAPGSCAVEISRLDLSSYESIVEFSQRAKELESLDICVLNAGMFKATESFNSSTGFEDAVQVN
YLSNALLMSLLLPILREKATSHPARLVLVSSDTAAWARFEERTSRPILATFKQKAASWDMQERYATSKLLGQLFL
TELCRRVPSSVVTIDSANPGFCYGTELGREGNGTLLGFFVKMLTRLIGKSCAVGARSIVHAAAGFDEDVHGQYVE
DGEIRP*
Coding >Ophun1|846
ATGGCTCAAAAATTCTCCATCTCCCCGGAGAAGGAAGCCAGCCTATCCCAGTACTTCTATCGCCAGTTCTTTGGA
AACACGCCCGTCTTGACGCAAGATGACGTCTGCCTCACCGGCAAAACCGCCATCGTGACCGGCTCCAACACCGGA
CTCGGGCTCGAAGTTTCCCGCCAGCTTCTCGATCTGGGGCTCAGCAGGCTCGTTCTAGCTGTGCGAGACGTTGCC
AAAGGCGAGGCTGCTCGCAGGGATCTTTGTCAGGGTCGCGCGCCTGGCTCGTGCGCTGTTGAGATTAGCAGGTTG
GACCTGTCCTCGTATGAGTCCATCGTTGAGTTTTCGCAGCGAGCCAAGGAGTTGGAAAGCCTGGATATCTGCGTC
TTGAACGCTGGTATGTTCAAGGCTACGGAGTCGTTCAACAGTTCTACCGGATTCGAGGACGCTGTCCAGGTTAAT
TATCTGTCGAATGCGCTTCTCATGTCTCTCCTCCTGCCCATCCTCAGAGAAAAGGCGACTTCGCATCCAGCACGT
CTTGTTCTCGTGTCCTCAGATACGGCGGCTTGGGCTCGCTTCGAAGAAAGAACATCAAGGCCAATACTCGCCACT
TTCAAGCAAAAGGCAGCTTCGTGGGATATGCAGGAGCGTTACGCTACCTCTAAACTACTGGGCCAGCTCTTCCTG
ACGGAGCTCTGTCGACGTGTGCCGTCTTCAGTTGTCACCATCGACTCTGCGAACCCGGGATTCTGCTACGGGACC
GAGCTTGGACGCGAGGGAAACGGCACCTTGCTTGGCTTTTTCGTCAAGATGCTGACACGCTTGATTGGCAAGTCG
TGTGCAGTTGGTGCGAGATCCATTGTTCATGCTGCGGCTGGATTTGACGAGGACGTTCACGGACAATACGTGGAA
GACGGGGAGATTCGACCGTAA
Transcript >Ophun1|846
ATGGCTCAAAAATTCTCCATCTCCCCGGAGAAGGAAGCCAGCCTATCCCAGTACTTCTATCGCCAGTTCTTTGGA
AACACGCCCGTCTTGACGCAAGATGACGTCTGCCTCACCGGCAAAACCGCCATCGTGACCGGCTCCAACACCGGA
CTCGGGCTCGAAGTTTCCCGCCAGCTTCTCGATCTGGGGCTCAGCAGGCTCGTTCTAGCTGTGCGAGACGTTGCC
AAAGGCGAGGCTGCTCGCAGGGATCTTTGTCAGGGTCGCGCGCCTGGCTCGTGCGCTGTTGAGATTAGCAGGTTG
GACCTGTCCTCGTATGAGTCCATCGTTGAGTTTTCGCAGCGAGCCAAGGAGTTGGAAAGCCTGGATATCTGCGTC
TTGAACGCTGGTATGTTCAAGGCTACGGAGTCGTTCAACAGTTCTACCGGATTCGAGGACGCTGTCCAGGTTAAT
TATCTGTCGAATGCGCTTCTCATGTCTCTCCTCCTGCCCATCCTCAGAGAAAAGGCGACTTCGCATCCAGCACGT
CTTGTTCTCGTGTCCTCAGATACGGCGGCTTGGGCTCGCTTCGAAGAAAGAACATCAAGGCCAATACTCGCCACT
TTCAAGCAAAAGGCAGCTTCGTGGGATATGCAGGAGCGTTACGCTACCTCTAAACTACTGGGCCAGCTCTTCCTG
ACGGAGCTCTGTCGACGTGTGCCGTCTTCAGTTGTCACCATCGACTCTGCGAACCCGGGATTCTGCTACGGGACC
GAGCTTGGACGCGAGGGAAACGGCACCTTGCTTGGCTTTTTCGTCAAGATGCTGACACGCTTGATTGGCAAGTCG
TGTGCAGTTGGTGCGAGATCCATTGTTCATGCTGCGGCTGGATTTGACGAGGACGTTCACGGACAATACGTGGAA
GACGGGGAGATTCGACCGTAA
Gene >Ophun1|846
ATGGCTCAAAAATTCTCCATCTCCCCGGAGAAGGAAGCCAGCCTATCCCAGTACTTCTATCGCCAGTTCTTTGGA
AACACGCCCGTCTTGACGCAAGATGACGTCTGCCTCACCGGCAAAACCGCCATCGTGACCGGCTCCAACACCGGA
CTCGGGCTCGAAGTTTCCCGCCAGCTTCTCGATCTGGGGCTCAGCAGGCTCGTTCTAGCTGTGCGAGACGTTGCC
AAAGGCGAGGCTGCTCGCAGGGATCTTTGTCAGGGTCGCGCGCCTGGCTCGTGCGCTGTTGAGATTAGCAGGTTG
GACCTGTCCTCGTATGAGTCCATCGTTGAGTTTTCGCAGCGAGCCAAGGAGTTGGAAAGCCTGGATATCTGCGTC
TTGAACGCTGGTATGTTCAAGGCTACGGAGTCGTTCAACAGTTCTACCGGATTCGAGGACGCTGTCCAGGTTAAT
TATCTGTCGAATGCGCTTCTCATGTCTCTCCTCCTGCCCATCCTCAGAGAAAAGGCGACTTCGCATCCAGCACGT
CTTGTTCTCGTGTCCTCAGATACGGCGGCTTGGGCTCGCTTCGAAGAAAGAACATCAAGGCCAATACTCGCCACT
TTCAAGCAAAAGGCAGCTTCGTGGGATATGCAGGAGCGTTACGCTACCTCTAAACTACTGGGCCAGCTCTTCCTG
ACGGAGCTCTGTCGACGTGTGCCGTCTTCAGTTGTCACCATCGACTCTGCGAACCCGGGATTCTGCTACGGGACC
GAGCTTGGACGCGAGGGAAACGGCACCTTGCTTGGCTTTTTCGTCAAGATGCTGACACGCTTGATTGGCAAGTCG
TGTGCAGTTGGTGCGAGATCCATTGTTCATGCTGCGGCTGGATTTGACGAGGACGTTCACGGACAATACGTGGAA
GACGGGGAGATTCGACCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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