Protein ID | Ophun1|82 |
Gene name | |
Location | Contig_10:59994..61220 |
Strand | - |
Gene length (bp) | 1226 |
Transcript length (bp) | 1107 |
Coding sequence length (bp) | 1107 |
Protein length (aa) | 369 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 19 | 41 | 22 |
2 | 53 | 75 | 22 |
3 | 102 | 121 | 19 |
4 | 133 | 155 | 22 |
5 | 178 | 200 | 22 |
6 | 212 | 234 | 22 |
7 | 249 | 271 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|82 MGWVRAATPEVEAQSQYGTIIAICIVLSLLSVSTVSCRLWIRAAARGLAGDDWMAALAMIFALAYSGLCIAQTKY GLGLPIKLRPKPNIIPYTRVNFAGRPIYQLGISFFKVALCISYLRLLKGTDQRTYRRIVWLTIILIFLAHLGCAL SLILACTPVAKSWNPLIDGSCLPPGPSFTGYAIVTIVSDVVVALLPIPVLLKLNVRLEKKIGLIAIFMLGLFTTL CSVMRYTQINRIQYGDGNSTMLVLWGTIEFNVGNMVSSLPFLAPVCMKKAKDYRSKYSGGSAGSSHGLSRRKNTD RFKLSDVSNDKMAFALSNRSASDHHAPTTAIKTHKSHRSILKSVTYTVKVDKEADDDDHYHDAVSSNV* |
Coding | >Ophun1|82 ATGGGCTGGGTCCGCGCCGCAACCCCCGAAGTCGAAGCCCAGTCCCAATACGGCACCATCATCGCCATCTGCATC GTCCTCTCCCTCCTCTCCGTCAGCACCGTCAGCTGCCGCCTCTGGATCCGCGCCGCCGCCCGCGGTCTCGCTGGC GATGACTGGATGGCTGCTCTGGCCATGATCTTCGCCCTCGCCTACTCTGGACTCTGCATCGCCCAGACGAAATAC GGCCTTGGTCTTCCTATAAAGCTCCGTCCTAAACCAAACATCATTCCTTACACCCGCGTCAACTTCGCCGGCCGT CCCATCTACCAGCTCGGCATATCCTTCTTTAAAGTCGCCCTCTGCATCAGCTACCTCCGTCTCCTCAAGGGCACC GACCAACGCACCTACCGCCGCATCGTCTGGCTAACCATCATCCTCATCTTCCTCGCCCATCTCGGCTGCGCCCTC TCCCTCATCCTCGCCTGCACCCCCGTCGCCAAGTCGTGGAATCCGCTCATCGACGGCTCCTGTCTGCCTCCTGGC CCGTCGTTTACCGGCTACGCCATCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCTATCCCCGTCTTG CTCAAGCTCAACGTCCGGCTGGAGAAGAAGATTGGCCTCATCGCCATCTTCATGCTCGGCCTCTTCACCACTCTC TGCTCCGTCATGCGCTACACCCAAATCAACCGCATCCAGTACGGAGACGGCAACTCCACCATGCTCGTCCTCTGG GGTACCATCGAGTTCAACGTCGGCAACATGGTCTCCTCCCTCCCCTTCCTGGCCCCCGTCTGCATGAAAAAGGCC AAGGACTACCGGTCTAAGTACTCCGGTGGCAGCGCAGGCAGCTCCCACGGCCTGAGCCGCCGCAAGAACACGGAC CGCTTCAAGCTGAGCGACGTCAGCAACGACAAGATGGCCTTTGCCCTATCCAACAGGTCCGCCAGCGACCATCAC GCCCCCACCACCGCCATCAAGACGCACAAGAGCCATCGGTCCATCCTCAAGTCCGTAACCTACACCGTCAAGGTC GACAAGGAAGCCGACGACGACGACCACTATCACGACGCCGTCTCTAGTAACGTGTGA |
Transcript | >Ophun1|82 ATGGGCTGGGTCCGCGCCGCAACCCCCGAAGTCGAAGCCCAGTCCCAATACGGCACCATCATCGCCATCTGCATC GTCCTCTCCCTCCTCTCCGTCAGCACCGTCAGCTGCCGCCTCTGGATCCGCGCCGCCGCCCGCGGTCTCGCTGGC GATGACTGGATGGCTGCTCTGGCCATGATCTTCGCCCTCGCCTACTCTGGACTCTGCATCGCCCAGACGAAATAC GGCCTTGGTCTTCCTATAAAGCTCCGTCCTAAACCAAACATCATTCCTTACACCCGCGTCAACTTCGCCGGCCGT CCCATCTACCAGCTCGGCATATCCTTCTTTAAAGTCGCCCTCTGCATCAGCTACCTCCGTCTCCTCAAGGGCACC GACCAACGCACCTACCGCCGCATCGTCTGGCTAACCATCATCCTCATCTTCCTCGCCCATCTCGGCTGCGCCCTC TCCCTCATCCTCGCCTGCACCCCCGTCGCCAAGTCGTGGAATCCGCTCATCGACGGCTCCTGTCTGCCTCCTGGC CCGTCGTTTACCGGCTACGCCATCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCTATCCCCGTCTTG CTCAAGCTCAACGTCCGGCTGGAGAAGAAGATTGGCCTCATCGCCATCTTCATGCTCGGCCTCTTCACCACTCTC TGCTCCGTCATGCGCTACACCCAAATCAACCGCATCCAGTACGGAGACGGCAACTCCACCATGCTCGTCCTCTGG GGTACCATCGAGTTCAACGTCGGCAACATGGTCTCCTCCCTCCCCTTCCTGGCCCCCGTCTGCATGAAAAAGGCC AAGGACTACCGGTCTAAGTACTCCGGTGGCAGCGCAGGCAGCTCCCACGGCCTGAGCCGCCGCAAGAACACGGAC CGCTTCAAGCTGAGCGACGTCAGCAACGACAAGATGGCCTTTGCCCTATCCAACAGGTCCGCCAGCGACCATCAC GCCCCCACCACCGCCATCAAGACGCACAAGAGCCATCGGTCCATCCTCAAGTCCGTAACCTACACCGTCAAGGTC GACAAGGAAGCCGACGACGACGACCACTATCACGACGCCGTCTCTAGTAACGTGTGA |
Gene | >Ophun1|82 ATGGGCTGGGTCCGCGCCGCAACCCCCGAAGTCGAAGCCCAGTCCCAATACGGCACCATCATCGCCATCTGCATC GTCCTCTCCCTCCTCTCCGTCAGCACCGTCAGCTGCCGCCTCTGGATCCGCGCCGCCGCCCGCGGTCTCGCTGGC GATGACTGGATGGCTGCTCTGGCCATGATCTTCGCCCTCGCCTACTCTGGACTCTGCATCGCCCGTACGTGTTTC CCTCTTCTGTTGGATGAGTTGGGACTGACAAGGCTGCAGAGACGAAATACGGCCTTGGTCTTCCTATAAAGCTCC GTCCTAAACCAAACATCATTCCTTACACCCGCGTCAACTTCGCCGGCCGTCCCATCTACCAGCTCGGCATATCCT TCTTTAAAGTCGCCCTCTGCATCAGCTACCTCCGTCTCCTCAAGGGCACCGACCAACGCACCTACCGCCGCATCG TCTGGCTAACCATCATCCTCATCTTCCTCGCCCATCTCGGCTGCGCCCTCTCCCTCATCCTCGCCTGCACCCCCG TCGCCAAGTCGTGGAATCCGCTCATCGACGGCTCCTGTCTGCCTCCTGGCCCGTCGTTTACCGGCTACGCCATCG TCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCTATCCCCGTCTTGCTCAAGCTCAACGTCCGGCTGGAGA AGAAGATTGGCCTCATCGCCATCTTCATGCTCGGCCTCTTCACCACTCTCTGCTCCGTCATGCGCTACACCCAAA TCAACCGCATCCAGTACGGAGACGGCAACTCCACCATGCTCGTCCTCTGGGGTACCATCGAGTTCAACGTCGGCG TATGTCTCCTTCCCCTCCCCTTGTCTCCCCTCCCCTCAACTCCTCCATGCTGACATGGTGCGTCGCAGAACATGG TCTCCTCCCTCCCCTTCCTGGCCCCCGTCTGCATGAAAAAGGCCAAGGACTACCGGTCTAAGTACTCCGGTGGCA GCGCAGGCAGCTCCCACGGCCTGAGCCGCCGCAAGAACACGGACCGCTTCAAGCTGAGCGACGTCAGCAACGACA AGATGGCCTTTGCCCTATCCAACAGGTCCGCCAGCGACCATCACGCCCCCACCACCGCCATCAAGACGCACAAGA GCCATCGGTCCATCCTCAAGTCCGTAACCTACACCGTCAAGGTCGACAAGGAAGCCGACGACGACGACCACTATC ACGACGCCGTCTCTAGTAACGTGTGA |