© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|816 |
| Gene name | |
| Location | Contig_129:17042..17964 |
| Strand | + |
| Gene length (bp) | 922 |
| Transcript length (bp) | 816 |
| Coding sequence length (bp) | 816 |
| Protein length (aa) | 272 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13430 | DUF4112 | Domain of unknown function (DUF4112) | 1.7E-33 | 63 | 166 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06170|YL326_YEAST | Uncharacterized membrane protein YLR326W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR326W PE=1 SV=1 | 24 | 158 | 3.0E-08 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 75 | 97 | 22 |
| 2 | 126 | 148 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 5379 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|816 MASFAAKVVSKRILGESLQNKFGTEDPYFETVPATRLGRPTGKYKKRKKALPPGISDHDGKILTKVKRRAYRLDL ALCSFLGIRFGWGSVIGLVPAIGDALDAFMALMVFKTCCQIDGGLPSSLKVQMILNVAFDFAIGLVPFLGDLADA VFKANTRNCLLLEQHLREKGKKEIRKSGLPLPAVDPSSAEEYDKTALDISPSETPPRRPSAATPSRMEHVESRPS APAESQGRKGRGWFSWNKSRPRPHDVETGEGAGRVHTSDERRGSRR* |
| Coding | >Ophun1|816 ATGGCTTCATTTGCTGCCAAGGTTGTGAGCAAGAGGATTTTGGGCGAGAGCCTGCAAAACAAATTCGGCACCGAG GATCCATACTTCGAGACTGTGCCCGCCACTCGACTCGGAAGGCCGACGGGCAAGTACAAGAAGCGGAAGAAGGCT CTCCCGCCCGGTATTTCGGACCATGACGGCAAGATCTTGACCAAAGTCAAGAGACGAGCATACCGCCTCGACCTG GCCCTCTGCAGTTTTCTGGGGATCCGGTTCGGCTGGGGTAGCGTGATTGGGCTCGTGCCTGCCATCGGAGATGCG TTGGATGCTTTCATGGCTTTGATGGTCTTTAAGACTTGCTGTCAGATCGATGGAGGGCTACCGAGCTCCCTCAAA GTGCAGATGATCCTTAACGTCGCCTTCGACTTTGCCATCGGCTTGGTGCCATTCCTCGGAGACCTCGCCGACGCC GTCTTCAAGGCCAATACTCGCAACTGTTTGCTTTTGGAACAGCACTTGCGGGAGAAGGGCAAGAAAGAAATCCGC AAGAGTGGCCTGCCGCTTCCCGCAGTCGACCCGAGCAGCGCTGAGGAGTATGACAAGACGGCGCTAGATATCAGT CCGTCGGAAACTCCGCCTCGACGACCTTCAGCGGCGACCCCATCGCGGATGGAGCACGTGGAGAGCAGGCCCAGT GCGCCAGCGGAGAGCCAAGGCCGCAAAGGCCGCGGCTGGTTCAGTTGGAACAAGTCTCGCCCTCGCCCTCATGAT GTCGAGACGGGTGAAGGAGCCGGCAGAGTCCATACTTCAGACGAGCGTCGTGGTAGCCGAAGATGA |
| Transcript | >Ophun1|816 ATGGCTTCATTTGCTGCCAAGGTTGTGAGCAAGAGGATTTTGGGCGAGAGCCTGCAAAACAAATTCGGCACCGAG GATCCATACTTCGAGACTGTGCCCGCCACTCGACTCGGAAGGCCGACGGGCAAGTACAAGAAGCGGAAGAAGGCT CTCCCGCCCGGTATTTCGGACCATGACGGCAAGATCTTGACCAAAGTCAAGAGACGAGCATACCGCCTCGACCTG GCCCTCTGCAGTTTTCTGGGGATCCGGTTCGGCTGGGGTAGCGTGATTGGGCTCGTGCCTGCCATCGGAGATGCG TTGGATGCTTTCATGGCTTTGATGGTCTTTAAGACTTGCTGTCAGATCGATGGAGGGCTACCGAGCTCCCTCAAA GTGCAGATGATCCTTAACGTCGCCTTCGACTTTGCCATCGGCTTGGTGCCATTCCTCGGAGACCTCGCCGACGCC GTCTTCAAGGCCAATACTCGCAACTGTTTGCTTTTGGAACAGCACTTGCGGGAGAAGGGCAAGAAAGAAATCCGC AAGAGTGGCCTGCCGCTTCCCGCAGTCGACCCGAGCAGCGCTGAGGAGTATGACAAGACGGCGCTAGATATCAGT CCGTCGGAAACTCCGCCTCGACGACCTTCAGCGGCGACCCCATCGCGGATGGAGCACGTGGAGAGCAGGCCCAGT GCGCCAGCGGAGAGCCAAGGCCGCAAAGGCCGCGGCTGGTTCAGTTGGAACAAGTCTCGCCCTCGCCCTCATGAT GTCGAGACGGGTGAAGGAGCCGGCAGAGTCCATACTTCAGACGAGCGTCGTGGTAGCCGAAGATGA |
| Gene | >Ophun1|816 ATGGCTTCATTTGCTGCCAAGGTTGTGAGCAAGAGGATTTTGGGCGAGAGCCTGCAAAACAAATTCGGCACCGAG GTTCGCGCATCCCAGACGCCCCTGTCATCGAAAATTCTCTGACCAGTTCCGCCTCTAGGATCCATACTTCGAGAC TGTGCCCGCCACTCGACTCGGAAGGCCGACGGGCAAGTACAAGAAGCGGAAGAAGGCTCTCCCGCCCGGTATTTC GGACCATGACGGCAAGATCTTGACCAAAGTCAAGAGACGAGCATACCGCCTCGACCTGGCCCTCTGCAGTTTTCT GGGGATCCGGTTCGGCTGGGGTAGCGTGATTGGGCTCGTGCCTGCGTGAGCTTGCCCCGAGACAACTGCCGGTGT TGAACTGACCGTCTTCAGCATCGGAGATGCGTTGGATGCTTTCATGGCTTTGATGGTCTTTAAGACTTGCTGTCA GATCGATGGAGGGCTACCGAGCTCCCTCAAAGTGCAGATGATCCTTAACGTCGCCTTCGACTTTGCCATCGGCTT GGTGCCATTCCTCGGAGACCTCGCCGACGCCGTCTTCAAGGCCAATACTCGCAACTGTTTGCTTTTGGAACAGCA CTTGCGGGAGAAGGGCAAGAAAGAAATCCGCAAGAGTGGCCTGCCGCTTCCCGCAGTCGACCCGAGCAGCGCTGA GGAGTATGACAAGACGGCGCTAGATATCAGTCCGTCGGAAACTCCGCCTCGACGACCTTCAGCGGCGACCCCATC GCGGATGGAGCACGTGGAGAGCAGGCCCAGTGCGCCAGCGGAGAGCCAAGGCCGCAAAGGCCGCGGCTGGTTCAG TTGGAACAAGTCTCGCCCTCGCCCTCATGATGTCGAGACGGGTGAAGGAGCCGGCAGAGTCCATACTTCAGACGA GCGTCGTGGTAGCCGAAGATGA |