© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|815 |
| Gene name | |
| Location | Contig_129:13837..16176 |
| Strand | - |
| Gene length (bp) | 2339 |
| Transcript length (bp) | 1881 |
| Coding sequence length (bp) | 1881 |
| Protein length (aa) | 627 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05026 | DCP2 | Dcp2, box A domain | 1.3E-31 | 10 | 93 |
| PF00293 | NUDIX | NUDIX domain | 1.6E-15 | 98 | 213 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13828|DCP2_SCHPO | mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcp2 PE=1 SV=1 | 12 | 256 | 1.0E-84 |
| sp|Q8GW31|DCP2_ARATH | mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1 | 12 | 248 | 6.0E-59 |
| sp|Q9CYC6|DCP2_MOUSE | m7GpppN-mRNA hydrolase OS=Mus musculus GN=Dcp2 PE=1 SV=2 | 12 | 249 | 5.0E-58 |
| sp|Q75BK1|DCP2_ASHGO | mRNA-decapping enzyme subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCP2 PE=3 SV=1 | 8 | 254 | 8.0E-58 |
| sp|Q8IU60|DCP2_HUMAN | m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2 | 12 | 249 | 9.0E-58 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13828|DCP2_SCHPO | mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcp2 PE=1 SV=1 | 12 | 256 | 1.0E-84 |
| sp|Q8GW31|DCP2_ARATH | mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1 | 12 | 248 | 6.0E-59 |
| sp|Q9CYC6|DCP2_MOUSE | m7GpppN-mRNA hydrolase OS=Mus musculus GN=Dcp2 PE=1 SV=2 | 12 | 249 | 5.0E-58 |
| sp|Q75BK1|DCP2_ASHGO | mRNA-decapping enzyme subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCP2 PE=3 SV=1 | 8 | 254 | 8.0E-58 |
| sp|Q8IU60|DCP2_HUMAN | m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2 | 12 | 249 | 9.0E-58 |
| sp|Q5REQ8|DCP2_PONAB | m7GpppN-mRNA hydrolase OS=Pongo abelii GN=DCP2 PE=2 SV=1 | 12 | 249 | 6.0E-57 |
| sp|P53550|DCP2_YEAST | mRNA-decapping enzyme subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCP2 PE=1 SV=1 | 12 | 254 | 2.0E-50 |
| sp|A6ZRW5|DCP2_YEAS7 | mRNA-decapping enzyme subunit 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DCP2 PE=3 SV=1 | 12 | 254 | 2.0E-50 |
| sp|O62255|DCP2_CAEEL | mRNA-decapping enzyme 2 OS=Caenorhabditis elegans GN=dcap-2 PE=2 SV=4 | 10 | 266 | 1.0E-47 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003723 | RNA binding | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0003676 | nucleic acid binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|815 MAAPQMLLEDWLDDLCVRFIINLPQEDLSSVARICFQVEEAQWFYEDFVRPLDPTLPSMSLRTFCLRIFQHCPLL ASFSAENHAQAFEEFLQYKTRVPVRGAIMLNQAMDSVVLVKGWKKASSWSFPRGKINKDEDDLDCAIREVYEETG FDIRAAGLVPSHKPKSIEITMREQQLRLYVFRDIPMDTDFQPRTRKEISKIQWYKLSELPTFRKKGDKAAQYHDG GAGNQATKFYMVAPFLVPLKKWIASQKKMNQNRAAQVTQANLAPQFSAPDEAFSVDDEAWATEQRGVPDGPIPAE TLSGATLELQRLLKMKQQAETPQQPQPENKGSALLSILQAGSSQSRDMTKLPQTPLDLSVAEPPPLPRNPHHHTN QLHPVSHETLEKGPPPSFQLGSNHEPVMLNAISVQGYNPPRHPPHAAGAGQQQQHARRDISLAHPQPLPPQVMQD TLIKSASYDHRPQGRGLLPPQARQSHTGPLEYGSHRDQTPLVHRPAQAATGGQTPLQPVRLLQRGQNLGDDPHGR LPRYDGLANQPRSMQGAQTVRSPGAASRRTGASDEQKMQLLSLFGKQQQNAAPGRDRGQGQLGPAAVTSPQRERE SETPMSPADQSFVLEYLQSVTNNVGR* |
| Coding | >Ophun1|815 ATGGCTGCACCTCAGATGCTGCTGGAGGATTGGCTCGACGACCTCTGCGTCCGCTTCATCATCAACCTTCCTCAA GAGGACTTATCCTCGGTCGCGAGAATCTGCTTTCAAGTCGAGGAAGCTCAATGGTTCTACGAAGACTTCGTTCGA CCTCTTGATCCAACCCTCCCGTCCATGTCGCTCCGCACGTTCTGTCTGAGGATCTTTCAGCACTGCCCACTTCTG GCATCTTTCTCCGCCGAAAACCATGCCCAAGCATTCGAAGAGTTCTTGCAGTACAAAACGCGGGTGCCCGTCCGC GGCGCCATCATGCTCAACCAGGCCATGGATTCGGTCGTTCTTGTCAAAGGCTGGAAAAAGGCTTCTAGCTGGAGC TTCCCCCGTGGCAAGATCAACAAAGACGAGGACGATCTCGATTGTGCTATACGCGAGGTGTACGAAGAAACAGGC TTCGACATCCGTGCCGCCGGGCTCGTTCCTAGTCATAAGCCAAAGAGCATCGAGATCACGATGAGGGAGCAGCAA CTTCGCCTCTACGTCTTCCGGGATATTCCGATGGACACCGACTTTCAGCCGCGAACACGCAAGGAGATTAGCAAA ATTCAATGGTACAAGCTATCAGAGCTCCCGACCTTTCGCAAAAAGGGCGACAAGGCTGCGCAGTACCATGACGGT GGAGCCGGCAACCAGGCCACCAAGTTTTACATGGTGGCTCCTTTCTTGGTTCCTCTGAAAAAATGGATTGCCTCT CAGAAGAAGATGAACCAGAACAGAGCTGCACAGGTGACTCAGGCTAATCTTGCTCCTCAGTTCTCGGCCCCCGAC GAGGCTTTCAGCGTCGACGACGAAGCGTGGGCCACGGAACAACGAGGCGTTCCCGACGGACCAATTCCCGCCGAG ACCCTCAGCGGAGCCACGCTGGAACTCCAACGTTTACTCAAGATGAAGCAGCAAGCGGAAACCCCCCAACAACCT CAGCCTGAGAACAAAGGCAGCGCGCTTCTCTCCATTCTCCAGGCCGGCAGTTCCCAGTCGCGGGATATGACGAAG CTTCCGCAGACACCTCTGGATCTCTCAGTGGCGGAGCCGCCGCCGCTTCCTCGCAACCCTCATCATCATACAAAC CAGCTCCATCCCGTTTCGCACGAGACCCTCGAGAAAGGGCCTCCGCCCAGCTTCCAGCTTGGCTCGAACCACGAA CCTGTAATGCTGAACGCCATATCAGTGCAGGGCTACAACCCGCCGAGGCACCCGCCGCACGCAGCGGGCGCGGGC CAGCAACAGCAACACGCCAGACGTGACATATCTCTGGCGCACCCACAACCCTTGCCTCCTCAAGTAATGCAGGAC ACTCTCATTAAAAGCGCCTCTTATGACCATCGACCTCAAGGCAGGGGCTTGTTGCCACCTCAGGCTCGGCAGTCG CATACTGGGCCTTTGGAGTATGGCTCTCACCGGGACCAGACGCCGCTTGTGCACCGGCCGGCCCAGGCTGCAACC GGGGGACAGACACCACTGCAGCCAGTACGGCTTCTTCAACGAGGCCAGAACCTGGGTGACGATCCGCATGGGCGG CTGCCGCGGTACGACGGGCTGGCCAACCAGCCTCGGAGCATGCAGGGCGCACAGACAGTGAGGTCGCCTGGGGCG GCCAGTCGACGTACCGGAGCATCTGACGAGCAGAAGATGCAGCTCCTCTCACTATTCGGTAAGCAGCAACAGAAT GCGGCGCCGGGAAGAGACCGAGGTCAGGGGCAGTTGGGCCCGGCGGCCGTGACATCGCCTCAGAGGGAGAGAGAG TCGGAGACGCCCATGTCACCAGCGGATCAGAGTTTTGTGCTGGAATATCTGCAGTCGGTGACGAACAATGTCGGG CGGTAG |
| Transcript | >Ophun1|815 ATGGCTGCACCTCAGATGCTGCTGGAGGATTGGCTCGACGACCTCTGCGTCCGCTTCATCATCAACCTTCCTCAA GAGGACTTATCCTCGGTCGCGAGAATCTGCTTTCAAGTCGAGGAAGCTCAATGGTTCTACGAAGACTTCGTTCGA CCTCTTGATCCAACCCTCCCGTCCATGTCGCTCCGCACGTTCTGTCTGAGGATCTTTCAGCACTGCCCACTTCTG GCATCTTTCTCCGCCGAAAACCATGCCCAAGCATTCGAAGAGTTCTTGCAGTACAAAACGCGGGTGCCCGTCCGC GGCGCCATCATGCTCAACCAGGCCATGGATTCGGTCGTTCTTGTCAAAGGCTGGAAAAAGGCTTCTAGCTGGAGC TTCCCCCGTGGCAAGATCAACAAAGACGAGGACGATCTCGATTGTGCTATACGCGAGGTGTACGAAGAAACAGGC TTCGACATCCGTGCCGCCGGGCTCGTTCCTAGTCATAAGCCAAAGAGCATCGAGATCACGATGAGGGAGCAGCAA CTTCGCCTCTACGTCTTCCGGGATATTCCGATGGACACCGACTTTCAGCCGCGAACACGCAAGGAGATTAGCAAA ATTCAATGGTACAAGCTATCAGAGCTCCCGACCTTTCGCAAAAAGGGCGACAAGGCTGCGCAGTACCATGACGGT GGAGCCGGCAACCAGGCCACCAAGTTTTACATGGTGGCTCCTTTCTTGGTTCCTCTGAAAAAATGGATTGCCTCT CAGAAGAAGATGAACCAGAACAGAGCTGCACAGGTGACTCAGGCTAATCTTGCTCCTCAGTTCTCGGCCCCCGAC GAGGCTTTCAGCGTCGACGACGAAGCGTGGGCCACGGAACAACGAGGCGTTCCCGACGGACCAATTCCCGCCGAG ACCCTCAGCGGAGCCACGCTGGAACTCCAACGTTTACTCAAGATGAAGCAGCAAGCGGAAACCCCCCAACAACCT CAGCCTGAGAACAAAGGCAGCGCGCTTCTCTCCATTCTCCAGGCCGGCAGTTCCCAGTCGCGGGATATGACGAAG CTTCCGCAGACACCTCTGGATCTCTCAGTGGCGGAGCCGCCGCCGCTTCCTCGCAACCCTCATCATCATACAAAC CAGCTCCATCCCGTTTCGCACGAGACCCTCGAGAAAGGGCCTCCGCCCAGCTTCCAGCTTGGCTCGAACCACGAA CCTGTAATGCTGAACGCCATATCAGTGCAGGGCTACAACCCGCCGAGGCACCCGCCGCACGCAGCGGGCGCGGGC CAGCAACAGCAACACGCCAGACGTGACATATCTCTGGCGCACCCACAACCCTTGCCTCCTCAAGTAATGCAGGAC ACTCTCATTAAAAGCGCCTCTTATGACCATCGACCTCAAGGCAGGGGCTTGTTGCCACCTCAGGCTCGGCAGTCG CATACTGGGCCTTTGGAGTATGGCTCTCACCGGGACCAGACGCCGCTTGTGCACCGGCCGGCCCAGGCTGCAACC GGGGGACAGACACCACTGCAGCCAGTACGGCTTCTTCAACGAGGCCAGAACCTGGGTGACGATCCGCATGGGCGG CTGCCGCGGTACGACGGGCTGGCCAACCAGCCTCGGAGCATGCAGGGCGCACAGACAGTGAGGTCGCCTGGGGCG GCCAGTCGACGTACCGGAGCATCTGACGAGCAGAAGATGCAGCTCCTCTCACTATTCGGTAAGCAGCAACAGAAT GCGGCGCCGGGAAGAGACCGAGGTCAGGGGCAGTTGGGCCCGGCGGCCGTGACATCGCCTCAGAGGGAGAGAGAG TCGGAGACGCCCATGTCACCAGCGGATCAGAGTTTTGTGCTGGAATATCTGCAGTCGGTGACGAACAATGTCGGG CGGTAG |
| Gene | >Ophun1|815 ATGGCTGCACCTCAGATGCTGCTGGAGGATTGTTCGTCACAAGCTCCCCTGATTGCTCCCCTGATATCCGCTGAC CGCTGCTGGCAGGGCTCGACGACCTCTGCGTCCGCTTCATCATCAACCTTCCTCAAGAGGACTTATCCTCGGTCG CGAGAATCTGCTTTCAAGTCGAGGAAGCTCAATGGTTCTACGAAGACTTCGTTCGACCTCTTGATCCAACCCTCC CGTCCATGTCGCTCCGCACGTTCTGTCTGAGGATCTTTCAGCACTGCCCACTTCTGGCATCTTTCTCCGCCGAAA ACCATGCCCAAGCATTCGAAGAGTTCTTGCAGTACAAAACGCGGGTGCCCGTCCGCGGCGCCATCATGCTCAACC AGGCCATGGATTCGGTCGTTCTTGTCAAAGGCTGGAAAAAGGCTTCTAGCTGGAGCTTCCCCCGTGGCAAGATCA ACAAAGACGAGGACGATCTCGATTGTGCTATACGCGAGGTGTACGAAGAAACAGGCTTCGACATCCGTGCCGCCG GGCTCGTTCCTAGTCATAAGCCAAAGAGCATCGAGATCACGATGAGGGAGCAGCAACTTCGCCTCTACGTCTTCC GGGATATTCCGATGGACACCGACTTTCAGCCGCGAACACGCAAGGAGATTAGCAAAATTCAATGGTACAAGCTAT CAGAGCTCCCGACCTTTCGCAAAAAGGGCGACAAGGCTGCGCAGTACCATGACGGTGGAGCCGGCAACCAGGCCA CCAAGTTTTACATGGTGGCTCCTTTCTTGGTTCCTCTGAAAAAATGGATTGCCTCTCAGAAGAAGATGAACCAGA ACAGAGCTGCACAGGTGACTCAGGCTAATCTTGCTCCTCAGTTCTCGGCCCCCGACGAGGCTTTCAGCGTCGACG ACGAAGCGTGGGCCACGGAACAACGAGGCGTTCCCGACGGACCAATTCCCGCCGAGACCCTCAGCGGAGCCACGC TGGAACTCCAACGTTTACTCAAGATGAAGCAGCAAGCGGAAACCCCCCAACAACCTCAGCCTGAGAACAAAGGCA GCGCGCTTCTCTCCATTCTCCAGGCCGGCAGTTCCCAGTCGCGGGATATGACGAAGCTTCCGCAGACACCTCTGG ATCTCTCAGTGGCGGAGCCGCCGCCGCTTCCTCGCAACCCTCATCATCATACAAACCAGCTCCATCCCGTTTCGC ACGAGACCCTCGAGAAAGGGCCTCCGCCCAGCTTCCAGCTTGGCTCGAACCACGAACCTGTAATGCTGAACGCCA TATCAGTGCAGGGCTACAACCCGCCGAGGCACCCGCCGCACGCAGCGGGCGCGGGCCAGCAACAGCAACACGCCA GACGTGACATATCTCTGGCGCACCCACAACCCTTGCCTCCTCAAGTAATGCAGGACACTCTCATTAAAAGCGCCT CTTATGGTTCGTCGGCATCTTATGAACCCAGTCGCATCCAGATGCAACCGGGCGAAGGACAAGTTCCTCCATACA TGCCCTTGCCTCCACCGGCACATCATGTCACTCAGGATTCGCGGACGGCGCAACTCGACGGACATTCAATGACAT TGATGACCATCATGAAGCGTGACACGACTCCTGCCCCCCCGCCATACAACAGTTTACACACGCACCAAGCCTCGG CGATGAGGCCTCCGTATGGCAGTCTGTCATTGCCTCGTGGACTTTCGGATGCGTATGACGGCTCCCCAAGACACG CATCAAGCTCAACTCTTGCTAGACCTGGCGTCAACATGGCTGCAGACCACCATCGATCTGCACTGCTGGGAATGT TCAAGAGGACCGAAGCTGACGCGAACAAGTCAGACCATCGACCTCAAGGCAGGGGCTTGTTGCCACCTCAGGCTC GGCAGTCGCATACTGGGCCTTTGGAGTATGGCTCTCACCGGGACCAGACGCCGCTTGTGCACCGGCCGGCCCAGG CTGCAACCGGGGGACAGACACCACTGCAGCCAGTACGGCTTCTTCAACGAGGCCAGAACCTGGGTGACGATCCGC ATGGGCGGCTGCCGCGGTACGACGGGCTGGCCAACCAGCCTCGGAGCATGCAGGGCGCACAGACAGTGAGGTCGC CTGGGGCGGCCAGTCGACGTACCGGAGCATCTGACGAGCAGAAGATGCAGCTCCTCTCACTATTCGGTAAGCAGC AACAGAATGCGGCGCCGGGAAGAGACCGAGGTCAGGGGCAGTTGGGCCCGGCGGCCGTGACATCGCCTCAGAGGG AGAGAGAGTCGGAGACGCCCATGTCACCAGCGGATCAGAGTTTTGTGCTGGAATATCTGCAGTCGGTGACGAACA ATGTCGGGCGGTAG |