Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|802
Gene name
LocationContig_128:31851..32859
Strand-
Gene length (bp)1008
Transcript length (bp)801
Coding sequence length (bp)801
Protein length (aa) 267

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01393 Chromo_shadow Chromo shadow domain 2.3E-16 201 255
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.7E-11 88 140

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O42934|CHP2_SCHPO Chromo domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=chp2 PE=3 SV=1 59 256 2.0E-13
sp|P40381|SWI6_SCHPO Chromatin-associated protein swi6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swi6 PE=1 SV=1 200 254 8.0E-13
sp|P45968|CEC3_CAEEL Chromo domain-containing protein cec-3 OS=Caenorhabditis elegans GN=cec-3 PE=3 SV=1 63 146 6.0E-06

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0043226 organelle No
GO:0043229 intracellular organelle No
GO:0005575 cellular_component No
GO:0043227 membrane-bounded organelle No
GO:0110165 cellular anatomical entity No
GO:0043231 intracellular membrane-bounded organelle No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4196
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4650
Ophiocordyceps australis map64 (Brazil) OphauB2|4585
Ophiocordyceps camponoti-floridani Ophcf2|01265
Ophiocordyceps camponoti-rufipedis Ophun1|802 (this protein)
Ophiocordyceps kimflemingae Ophio5|8488
Ophiocordyceps subramaniannii Hirsu2|8528

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|802
MARKRRVAKRAAALSDDAASDDLELRPAASVSVEDEEEEDDVASDPEPPRKTDLKSKASATPKDESEEVEEDEGD
DDDDDEDLGEDEFIVEAIKKHMADADGSLKFLVKWEGYNKKSDMTWEPEDNLMESASDILAQYYNQIGGRDSIFE
ESQVASRSKKRGRTSTGTPSTTKRPRKNGLHPADSTPPASARKWSPPAGSWEDEIESIDACHDEGSGKLAVFLIW
NNGKKTKHDTTVVYKKCPQKMLQFYERHIKVIREENQAAGM*
Coding >Ophun1|802
ATGGCGCGTAAAAGACGTGTCGCTAAACGCGCTGCAGCTCTTAGCGACGACGCGGCGTCGGATGACCTCGAGCTC
CGGCCTGCCGCGTCAGTGTCTGTCGAAGACGAGGAAGAGGAAGACGATGTCGCCAGCGATCCTGAACCCCCGCGA
AAGACGGACTTGAAGTCCAAGGCCTCGGCCACGCCTAAAGACGAGAGCGAAGAGGTCGAGGAAGACGAGGGCGAC
GACGACGACGACGATGAAGATCTTGGCGAGGATGAGTTCATCGTCGAGGCCATCAAGAAGCACATGGCAGACGCA
GATGGCTCTCTCAAGTTTCTAGTCAAGTGGGAAGGCTACAACAAGAAGTCGGACATGACGTGGGAGCCGGAAGAT
AACCTGATGGAGTCTGCGTCGGACATCCTGGCACAGTACTACAACCAGATCGGCGGTCGCGACAGCATCTTTGAA
GAGTCGCAAGTGGCATCTCGCAGCAAGAAGCGTGGGCGCACATCGACCGGGACGCCGTCGACGACGAAGCGGCCG
CGGAAGAACGGGCTGCACCCGGCCGACTCGACGCCGCCAGCGAGCGCCAGGAAGTGGAGCCCGCCGGCCGGGTCA
TGGGAAGACGAGATCGAGTCCATCGACGCGTGCCACGACGAGGGAAGCGGCAAGTTGGCCGTATTCCTGATTTGG
AACAATGGCAAGAAGACGAAGCACGACACGACGGTCGTCTACAAGAAGTGTCCGCAAAAGATGCTCCAGTTCTAC
GAGAGGCACATCAAGGTCATCCGCGAAGAGAACCAGGCAGCGGGCATGTAG
Transcript >Ophun1|802
ATGGCGCGTAAAAGACGTGTCGCTAAACGCGCTGCAGCTCTTAGCGACGACGCGGCGTCGGATGACCTCGAGCTC
CGGCCTGCCGCGTCAGTGTCTGTCGAAGACGAGGAAGAGGAAGACGATGTCGCCAGCGATCCTGAACCCCCGCGA
AAGACGGACTTGAAGTCCAAGGCCTCGGCCACGCCTAAAGACGAGAGCGAAGAGGTCGAGGAAGACGAGGGCGAC
GACGACGACGACGATGAAGATCTTGGCGAGGATGAGTTCATCGTCGAGGCCATCAAGAAGCACATGGCAGACGCA
GATGGCTCTCTCAAGTTTCTAGTCAAGTGGGAAGGCTACAACAAGAAGTCGGACATGACGTGGGAGCCGGAAGAT
AACCTGATGGAGTCTGCGTCGGACATCCTGGCACAGTACTACAACCAGATCGGCGGTCGCGACAGCATCTTTGAA
GAGTCGCAAGTGGCATCTCGCAGCAAGAAGCGTGGGCGCACATCGACCGGGACGCCGTCGACGACGAAGCGGCCG
CGGAAGAACGGGCTGCACCCGGCCGACTCGACGCCGCCAGCGAGCGCCAGGAAGTGGAGCCCGCCGGCCGGGTCA
TGGGAAGACGAGATCGAGTCCATCGACGCGTGCCACGACGAGGGAAGCGGCAAGTTGGCCGTATTCCTGATTTGG
AACAATGGCAAGAAGACGAAGCACGACACGACGGTCGTCTACAAGAAGTGTCCGCAAAAGATGCTCCAGTTCTAC
GAGAGGCACATCAAGGTCATCCGCGAAGAGAACCAGGCAGCGGGCATGTAG
Gene >Ophun1|802
ATGGCGCGTAAAAGACGTGTCGCTAAACGCGCTGCAGCTCTTAGCGACGACGCGGCGTCGGATGACCTCGAGCTC
CGGCCTGCCGCGTCAGTGTCTGTCGAAGACGAGGAAGAGGAAGACGATGTCGCCAGCGATCCTGAACCCCCGCGA
AAGACGGACTTGAAGTCCAAGGCCTCGGCCACGCCTAAAGACGAGAGCGAAGAGGTCGAGGAAGACGAGGGCGAC
GACGACGACGACGATGAAGATCTTGGCGAGGATGAGTACGGTGGCGGCGACTTGGGAGATCTGGGGATGGCTGCT
GACGGGCAGTAGGTTCATCGTCGAGGCCATCAAGAAGCACATGGCAGACGCAGATGTACGTGCGCAGCCAGTTCT
CGCCGACGCAACTGACGGTCCTGTAGGGCTCTCTCAAGTTTCTAGTCAAGTGGGAAGGCTACAACAAGAAGTCGG
ACATGACGTGGGAGCCGGAAGATAACCTGATGTGGGTTCCAGCCGTCGCGCGCGGTCCTGAGCGCGGCATCACTG
ACTTGGCGGCAGGGAGTCTGCGTCGGACATCCTGGCACAGTACTACAACCAGATCGGCGGTCGCGACAGCATCTT
TGAAGAGTCGCAAGTGGCATCTCGCAGCAAGAAGCGTGGGCGCACATCGACCGGGACGCCGTCGACGACGAAGCG
GCCGCGGAAGAACGGGCTGCACCCGGCCGACTCGACGCCGCCAGCGAGCGCCAGGAAGTGGAGCCCGCCGGCCGG
GTCATGGGAAGACGAGATCGAGTCCATCGACGCGTGCCACGACGAGGGAAGCGGCAAGTTGGCCGTATTCCTGAT
TTGGAACAATGGCAAGAAGACGAAGCACGACACGACGGTCGTCTACAAGAAGTGTCCGCAAAAGGTAGAGATGAT
GTGGCGAGGGCCGCGAGAGAGACGAGGCTGACGATGAAGCAGATGCTCCAGTTCTACGAGAGGCACATCAAGGTC
ATCCGCGAAGAGAACCAGGCAGCGGGCATGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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